==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DEFENSIN 12-JUL-00 1E4T . COMPND 2 MOLECULE: BETA-DEFENSIN 7; . SOURCE 2 SYNTHETIC: YES; . AUTHOR F.BAUER,K.SCHWEIMER,E.KLUVER,K.ADERMANN,W.G.FORSSMANN, . 37 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3762.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 54.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 27.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A N 0 0 180 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 145.3 45.3 -5.0 12.2 2 2 A S + 0 0 122 1,-0.1 2,-0.3 2,-0.0 0, 0.0 0.904 360.0 27.8 -62.7 -38.2 43.1 -3.4 15.0 3 3 A K S S- 0 0 176 22,-0.0 2,-0.3 2,-0.0 -1,-0.1 -0.901 72.8-157.2-123.8 153.8 43.3 0.0 13.3 4 4 A R - 0 0 199 -2,-0.3 2,-0.8 20,-0.2 3,-0.1 -0.865 33.0 -93.8-126.3 162.5 43.8 1.0 9.6 5 5 A A > - 0 0 57 -2,-0.3 4,-1.4 1,-0.2 3,-0.3 -0.623 27.2-161.4 -77.4 112.0 45.1 4.1 7.8 6 6 A a H >>S+ 0 0 20 -2,-0.8 5,-1.3 20,-0.3 4,-1.3 0.803 89.3 63.4 -64.0 -24.4 42.0 6.3 7.0 7 7 A Y H 45S+ 0 0 197 1,-0.2 3,-0.4 2,-0.2 -1,-0.2 0.938 100.4 49.6 -66.5 -43.9 44.2 8.1 4.5 8 8 A R H 45S+ 0 0 206 -3,-0.3 -1,-0.2 1,-0.2 -2,-0.2 0.884 106.9 56.5 -63.3 -35.2 44.6 5.0 2.3 9 9 A E H <5S- 0 0 66 -4,-1.4 -1,-0.2 1,-0.1 -2,-0.2 0.852 104.0-134.0 -66.2 -31.0 40.9 4.3 2.4 10 10 A G T <5 + 0 0 60 -4,-1.3 -3,-0.2 -3,-0.4 -2,-0.1 0.842 50.4 151.6 81.6 32.7 40.3 7.8 0.9 11 11 A G < - 0 0 23 -5,-1.3 2,-0.4 24,-0.1 24,-0.2 -0.127 44.7-104.0 -84.1-172.0 37.5 8.7 3.4 12 12 A E E -A 34 0A 105 22,-2.0 22,-1.7 15,-0.0 2,-0.6 -0.895 19.8-131.1-117.8 147.7 36.6 12.2 4.6 13 13 A b E -A 33 0A 61 -2,-0.4 2,-0.4 20,-0.2 20,-0.2 -0.837 26.2-174.9 -99.1 120.2 37.4 13.9 8.0 14 14 A L E > -A 32 0A 50 18,-1.2 18,-1.3 -2,-0.6 3,-0.8 -0.923 28.4-142.4-116.1 138.2 34.4 15.6 9.7 15 15 A Q T 3 S+ 0 0 140 -2,-0.4 -1,-0.1 1,-0.3 15,-0.0 0.827 106.0 16.9 -65.5 -27.5 34.6 17.6 12.9 16 16 A R T 3 S- 0 0 208 16,-0.1 -1,-0.3 -3,-0.1 15,-0.0 -0.347 84.2-157.8-141.3 58.5 31.2 16.1 13.9 17 17 A c < - 0 0 25 -3,-0.8 2,-0.1 1,-0.1 6,-0.1 -0.061 17.7-145.9 -38.6 124.6 30.6 13.0 11.8 18 18 A I > - 0 0 116 1,-0.1 3,-0.8 4,-0.1 -1,-0.1 -0.394 26.7 -97.5 -91.6 173.9 26.8 12.5 11.8 19 19 A G T 3 S+ 0 0 68 1,-0.2 -1,-0.1 -2,-0.1 4,-0.1 0.955 120.4 66.4 -56.9 -48.7 25.0 9.1 11.8 20 20 A L T 3 S+ 0 0 105 1,-0.1 2,-0.6 2,-0.1 -1,-0.2 0.866 95.5 66.5 -40.8 -40.8 24.5 9.4 8.0 21 21 A F S < S- 0 0 50 -3,-0.8 15,-0.2 15,-0.1 -1,-0.1 -0.742 89.1-134.5 -88.4 118.7 28.2 9.1 7.7 22 22 A H E -B 35 0A 101 13,-1.3 13,-1.7 -2,-0.6 2,-0.6 -0.355 18.9-127.2 -67.6 150.1 29.5 5.6 8.8 23 23 A K E +B 34 0A 130 11,-0.2 11,-0.3 1,-0.2 3,-0.1 -0.872 33.8 167.1-105.3 125.6 32.6 5.7 11.0 24 24 A I E - 0 0 80 9,-2.3 2,-0.2 -2,-0.6 -20,-0.2 0.786 66.6 -53.8-100.8 -37.5 35.7 3.6 10.1 25 25 A G E -B 33 0A 29 8,-1.2 8,-2.5 -22,-0.1 2,-0.3 -0.837 69.3 -62.2-171.8-150.4 38.2 5.2 12.5 26 26 A T E -B 32 0A 108 6,-0.3 -20,-0.3 -2,-0.2 6,-0.3 -0.824 40.1-124.3-119.2 160.2 39.6 8.6 13.5 27 27 A b - 0 0 19 4,-2.6 3,-0.2 -2,-0.3 6,-0.1 -0.048 46.4 -78.3 -87.1-164.9 41.6 11.2 11.5 28 28 A N S S- 0 0 170 1,-0.3 2,-0.3 4,-0.1 -1,-0.0 0.918 103.4 -29.5 -64.9 -42.2 45.0 12.8 12.4 29 29 A F S S+ 0 0 140 3,-0.0 -1,-0.3 0, 0.0 3,-0.1 -0.879 126.5 10.1-175.1 140.7 43.5 15.1 15.0 30 30 A R S S+ 0 0 193 -2,-0.3 2,-0.3 1,-0.2 -2,-0.1 0.761 111.9 86.6 57.5 20.7 40.2 17.0 15.8 31 31 A F - 0 0 86 -4,-0.1 -4,-2.6 -15,-0.0 2,-0.3 -0.997 65.0-145.2-148.1 152.4 38.7 14.9 13.0 32 32 A K E -AB 14 26A 90 -18,-1.3 -18,-1.2 -2,-0.3 2,-0.6 -0.831 23.5-114.8-117.8 158.1 37.1 11.5 12.6 33 33 A a E +AB 13 25A 0 -8,-2.5 -9,-2.3 -2,-0.3 -8,-1.2 -0.798 46.5 156.0 -94.8 119.3 37.2 9.0 9.7 34 34 A c E -AB 12 23A 1 -22,-1.7 -22,-2.0 -2,-0.6 2,-0.4 -0.909 30.2-137.7-136.4 165.1 33.8 8.4 8.0 35 35 A K E - B 0 22A 69 -13,-1.7 -13,-1.3 -2,-0.3 2,-0.4 -0.969 9.3-146.2-127.8 141.7 32.6 7.3 4.6 36 36 A F 0 0 130 -2,-0.4 -15,-0.1 -15,-0.2 -16,-0.0 -0.854 360.0 360.0-106.6 139.1 29.7 8.6 2.4 37 37 A Q 0 0 182 -2,-0.4 -1,-0.0 -17,-0.2 -17,-0.0 -0.262 360.0 360.0-134.6 360.0 27.5 6.4 0.2