==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 22-DEC-06 2E5P . COMPND 2 MOLECULE: PHD FINGER PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5686.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 61.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 33.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 20.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 130 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 77.4 -17.5 -22.4 -0.7 2 2 A S + 0 0 130 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.992 360.0 179.6-150.2 139.2 -14.1 -20.8 -0.0 3 3 A S - 0 0 112 -2,-0.3 2,-0.6 2,-0.0 0, 0.0 -0.819 45.7 -69.7-132.8 172.2 -10.5 -21.7 -0.5 4 4 A G + 0 0 85 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.515 67.7 147.1 -68.6 112.4 -7.0 -20.3 0.1 5 5 A S - 0 0 108 -2,-0.6 2,-0.5 0, 0.0 -2,-0.0 -0.996 48.3-115.8-149.7 142.9 -6.6 -17.4 -2.3 6 6 A S - 0 0 98 -2,-0.3 -2,-0.0 1,-0.2 3,-0.0 -0.660 26.2-177.0 -81.9 125.4 -4.7 -14.1 -2.2 7 7 A G + 0 0 66 -2,-0.5 -1,-0.2 2,-0.0 2,-0.0 0.961 62.2 52.3 -83.4 -68.7 -7.0 -11.1 -2.4 8 8 A P - 0 0 95 0, 0.0 46,-0.0 0, 0.0 0, 0.0 -0.305 55.8-170.0 -69.8 153.6 -4.7 -8.0 -2.5 9 9 A R + 0 0 181 2,-0.1 5,-0.0 -2,-0.0 -2,-0.0 0.771 5.8 178.7-109.9 -49.5 -1.9 -7.7 -5.0 10 10 A L + 0 0 20 1,-0.1 3,-0.1 5,-0.1 4,-0.1 0.864 26.9 175.0 43.2 44.1 0.1 -4.6 -3.9 11 11 A W > - 0 0 133 1,-0.1 3,-1.2 2,-0.1 2,-0.3 -0.325 43.4 -75.2 -76.6 161.8 2.4 -5.3 -6.9 12 12 A E T 3 S+ 0 0 138 1,-0.3 19,-0.2 19,-0.1 -1,-0.1 -0.398 122.6 24.3 -60.4 118.2 5.3 -3.0 -7.8 13 13 A G T 3 S+ 0 0 49 17,-2.3 2,-0.6 -2,-0.3 -1,-0.3 0.709 86.4 138.8 98.0 25.1 3.8 0.0 -9.5 14 14 A Q < - 0 0 35 -3,-1.2 16,-1.6 16,-0.3 2,-0.5 -0.910 54.2-127.6-108.4 117.6 0.3 -0.2 -8.0 15 15 A D E +A 29 0A 102 -2,-0.6 45,-0.5 14,-0.2 2,-0.2 -0.467 45.9 159.4 -64.4 113.0 -1.3 3.1 -6.9 16 16 A V E -A 28 0A 1 12,-2.6 12,-2.9 -2,-0.5 2,-0.5 -0.741 40.3-115.0-128.7 177.1 -2.3 2.6 -3.3 17 17 A L E -AB 27 58A 47 41,-2.6 41,-2.9 10,-0.2 2,-0.5 -0.948 22.2-159.0-122.3 112.9 -3.2 4.7 -0.2 18 18 A A E -AB 26 57A 1 8,-2.3 8,-2.3 -2,-0.5 39,-0.2 -0.789 18.2-130.7 -93.5 125.0 -1.0 4.5 2.9 19 19 A R E -A 25 0A 140 37,-1.2 2,-0.3 -2,-0.5 6,-0.2 -0.279 20.3-141.0 -69.6 157.5 -2.6 5.6 6.1 20 20 A W > - 0 0 104 4,-1.9 3,-1.4 1,-0.0 -1,-0.1 -0.762 32.2 -95.1-118.4 165.2 -0.8 8.0 8.4 21 21 A T T 3 S+ 0 0 142 1,-0.3 -2,-0.0 -2,-0.3 -1,-0.0 0.778 125.8 59.8 -47.1 -28.5 -0.4 8.3 12.2 22 22 A D T 3 S- 0 0 124 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.898 114.7-117.2 -68.9 -41.8 -3.3 10.7 12.0 23 23 A G S < S+ 0 0 37 -3,-1.4 -2,-0.1 1,-0.5 -1,-0.1 -0.094 75.4 112.7 130.7 -36.1 -5.6 8.0 10.5 24 24 A L S S- 0 0 115 -5,-0.1 -4,-1.9 1,-0.1 -1,-0.5 -0.101 71.8-101.6 -63.2 166.5 -6.4 9.4 7.1 25 25 A L E -A 19 0A 81 -6,-0.2 2,-0.3 -3,-0.1 -6,-0.3 -0.758 33.3-157.6 -96.0 138.6 -5.2 7.8 3.9 26 26 A Y E -A 18 0A 93 -8,-2.3 -8,-2.3 -2,-0.4 2,-0.4 -0.865 27.5-100.4-116.2 149.7 -2.2 9.2 2.0 27 27 A L E +A 17 0A 97 -2,-0.3 18,-0.4 -10,-0.2 2,-0.3 -0.521 52.1 167.7 -69.4 120.5 -1.3 8.7 -1.7 28 28 A G E -A 16 0A 0 -12,-2.9 -12,-2.6 -2,-0.4 2,-0.5 -0.980 29.0-141.1-138.1 150.2 1.5 6.1 -2.0 29 29 A T E -AC 15 43A 42 14,-1.3 14,-1.4 -2,-0.3 2,-0.8 -0.942 29.0-115.8-114.7 125.2 3.1 4.1 -4.7 30 30 A I E + C 0 42A 3 -16,-1.6 -17,-2.3 -2,-0.5 -16,-0.3 -0.390 44.2 163.6 -59.1 100.5 4.1 0.4 -4.2 31 31 A K E + 0 0 68 10,-2.8 2,-0.3 -2,-0.8 11,-0.2 0.869 64.6 6.6 -87.1 -42.9 7.9 0.6 -4.5 32 32 A K E - C 0 41A 104 9,-1.8 9,-0.8 -3,-0.2 2,-0.4 -0.961 59.0-152.8-140.7 157.3 8.7 -2.8 -3.0 33 33 A V E - C 0 40A 52 -2,-0.3 2,-0.5 7,-0.3 7,-0.3 -0.929 9.0-170.7-137.4 111.7 6.8 -5.9 -1.8 34 34 A D E > - C 0 39A 66 5,-2.0 5,-2.3 -2,-0.4 -2,-0.0 -0.894 8.9-175.5-105.7 122.8 8.2 -8.2 0.9 35 35 A S T 5S+ 0 0 94 -2,-0.5 3,-0.4 3,-0.2 -1,-0.2 0.861 80.9 64.0 -81.1 -38.9 6.4 -11.5 1.5 36 36 A A T 5S+ 0 0 95 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.941 120.1 23.3 -48.9 -57.0 8.5 -12.5 4.5 37 37 A R T 5S- 0 0 182 2,-0.1 -1,-0.3 16,-0.0 17,-0.2 0.365 107.2-126.7 -92.0 3.7 7.4 -9.6 6.6 38 38 A E T 5 + 0 0 116 -3,-0.4 16,-1.4 1,-0.2 17,-0.3 0.933 67.1 123.8 49.4 53.9 4.2 -9.3 4.5 39 39 A V E < -CD 34 53A 4 -5,-2.3 -5,-2.0 14,-0.2 2,-0.3 -0.762 52.6-139.5-132.9 178.6 4.8 -5.6 3.8 40 40 A C E -CD 33 52A 0 12,-2.6 12,-1.9 -7,-0.3 2,-0.8 -0.921 17.3-131.2-149.2 118.6 5.2 -3.2 0.9 41 41 A L E -CD 32 51A 31 -9,-0.8 -10,-2.8 -2,-0.3 -9,-1.8 -0.568 34.8-175.7 -72.0 106.3 7.7 -0.3 0.6 42 42 A V E -CD 30 50A 0 8,-1.2 8,-2.0 -2,-0.8 2,-0.3 -0.781 14.1-141.6-106.1 149.6 5.6 2.7 -0.5 43 43 A Q E -CD 29 49A 46 -14,-1.4 -14,-1.3 -2,-0.3 2,-0.3 -0.812 10.0-144.9-110.4 150.6 6.9 6.2 -1.4 44 44 A F E >> - D 0 48A 32 4,-1.5 3,-0.8 -2,-0.3 4,-0.6 -0.725 34.9-100.8-111.2 161.8 5.3 9.5 -0.6 45 45 A E T 34 S+ 0 0 173 -18,-0.4 2,-0.3 1,-0.3 -17,-0.1 0.713 120.7 67.6 -51.3 -19.6 5.1 12.8 -2.6 46 46 A D T 34 S- 0 0 122 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 -0.248 121.5-105.4 -96.8 44.7 8.0 13.8 -0.3 47 47 A D T <4 S+ 0 0 132 -3,-0.8 2,-0.9 -2,-0.3 -2,-0.2 0.746 74.5 151.7 38.8 26.2 10.4 11.3 -1.8 48 48 A S E < -D 44 0A 44 -4,-0.6 -4,-1.5 2,-0.0 2,-0.6 -0.771 22.6-178.1 -91.5 104.7 9.7 9.5 1.5 49 49 A Q E +D 43 0A 114 -2,-0.9 2,-0.3 -6,-0.2 -6,-0.2 -0.908 15.8 146.6-108.2 117.7 10.2 5.8 0.9 50 50 A F E -D 42 0A 151 -8,-2.0 -8,-1.2 -2,-0.6 2,-0.8 -0.838 52.9 -85.5-139.2 175.8 9.5 3.5 3.9 51 51 A L E -D 41 0A 78 -2,-0.3 2,-0.6 -10,-0.2 -10,-0.2 -0.782 41.3-170.0 -91.5 111.2 8.2 -0.0 4.7 52 52 A V E -D 40 0A 15 -12,-1.9 -12,-2.6 -2,-0.8 5,-0.1 -0.895 22.5-121.6-106.0 120.7 4.4 -0.0 4.9 53 53 A L E > -D 39 0A 51 -2,-0.6 4,-0.9 -14,-0.3 -14,-0.2 0.090 23.1-113.3 -48.3 168.3 2.7 -3.1 6.3 54 54 A W T 4 S+ 0 0 85 -16,-1.4 -15,-0.1 -17,-0.2 -1,-0.1 0.879 116.5 44.4 -75.4 -39.9 0.1 -4.9 4.1 55 55 A K T 4 S+ 0 0 167 -17,-0.3 -1,-0.1 1,-0.2 -16,-0.1 0.888 107.3 58.8 -71.5 -40.5 -2.8 -4.1 6.4 56 56 A D T 4 S+ 0 0 58 -38,-0.1 -37,-1.2 2,-0.1 -1,-0.2 0.833 92.8 85.4 -57.8 -33.3 -1.7 -0.5 6.9 57 57 A I E < S-B 18 0A 13 -4,-0.9 -39,-0.2 -39,-0.2 -32,-0.0 -0.479 70.8-150.8 -73.2 139.7 -2.0 -0.1 3.1 58 58 A S E -B 17 0A 33 -41,-2.9 -41,-2.6 -32,-0.2 2,-0.2 -0.892 19.4-108.1-115.6 143.5 -5.4 0.8 1.8 59 59 A P - 0 0 112 0, 0.0 2,-0.7 0, 0.0 -43,-0.1 -0.466 26.7-147.3 -69.8 132.4 -6.9 -0.1 -1.7 60 60 A A - 0 0 37 -45,-0.5 2,-0.2 -2,-0.2 -45,-0.1 -0.888 9.8-144.3-107.0 109.3 -7.3 2.8 -4.1 61 61 A A - 0 0 88 -2,-0.7 -45,-0.0 1,-0.2 0, 0.0 -0.512 13.4-171.9 -72.8 133.3 -10.2 2.6 -6.4 62 62 A L S S+ 0 0 168 -2,-0.2 -1,-0.2 2,-0.1 0, 0.0 0.916 83.4 26.9 -89.0 -55.1 -9.7 3.9 -9.9 63 63 A S S S- 0 0 120 1,-0.2 -2,-0.1 3,-0.0 0, 0.0 0.986 101.3-143.2 -72.2 -62.7 -13.1 3.8 -11.5 64 64 A G + 0 0 34 2,-0.0 2,-1.6 0, 0.0 -1,-0.2 -0.926 51.8 1.2 133.9-158.8 -15.3 4.1 -8.3 65 65 A P - 0 0 122 0, 0.0 2,-0.5 0, 0.0 0, 0.0 -0.488 70.0-141.8 -69.7 87.2 -18.6 2.7 -7.0 66 66 A S - 0 0 122 -2,-1.6 2,-0.3 2,-0.1 -2,-0.0 -0.328 26.5-171.6 -54.8 104.0 -19.6 0.4 -9.8 67 67 A S 0 0 117 -2,-0.5 -1,-0.0 1,-0.2 0, 0.0 -0.763 360.0 360.0-103.4 148.3 -23.3 0.9 -9.9 68 68 A G 0 0 131 -2,-0.3 -1,-0.2 0, 0.0 -2,-0.1 0.141 360.0 360.0 130.3 360.0 -25.8 -1.0 -12.0