==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-NOV-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 18-AUG-00 1E6I . COMPND 2 MOLECULE: TRANSCRIPTIONAL ACTIVATOR GCN5; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR D.J.OWEN,A.A.TRAVERS,P.R.EVANS . 115 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7203.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 80 69.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 18 15.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 56 48.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 329 A R 0 0 219 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 143.7 8.2 37.9 20.6 2 330 A G >> - 0 0 27 1,-0.1 3,-0.7 2,-0.1 4,-0.6 -0.273 360.0-113.7 -47.3 142.1 5.4 35.9 19.0 3 331 A P T 34 S+ 0 0 120 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.668 116.5 27.8 -57.2 -21.0 4.4 32.7 20.9 4 332 A H T 3> S+ 0 0 46 54,-0.2 4,-2.7 2,-0.1 5,-0.2 0.377 92.6 100.0-118.9 -1.3 5.7 30.5 18.1 5 333 A D H <> S+ 0 0 25 -3,-0.7 4,-2.6 1,-0.2 5,-0.2 0.885 85.2 44.3 -53.2 -48.0 8.4 32.8 16.5 6 334 A A H X S+ 0 0 61 -4,-0.6 4,-2.2 2,-0.2 -1,-0.2 0.913 114.9 47.6 -69.9 -39.3 11.4 31.2 18.2 7 335 A A H > S+ 0 0 24 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.929 114.0 47.8 -67.7 -43.0 10.3 27.6 17.5 8 336 A I H X S+ 0 0 0 -4,-2.7 4,-2.9 1,-0.2 5,-0.2 0.929 111.3 49.9 -63.2 -47.1 9.5 28.4 13.9 9 337 A Q H X S+ 0 0 55 -4,-2.6 4,-2.4 -5,-0.2 -1,-0.2 0.905 111.7 49.4 -57.5 -44.5 12.9 30.2 13.3 10 338 A N H X S+ 0 0 87 -4,-2.2 4,-2.0 2,-0.2 -1,-0.2 0.928 113.7 44.6 -61.8 -45.8 14.7 27.3 14.8 11 339 A I H X S+ 0 0 1 -4,-2.3 4,-2.5 2,-0.2 -2,-0.2 0.933 113.8 50.1 -65.9 -42.5 12.9 24.7 12.7 12 340 A L H X S+ 0 0 0 -4,-2.9 4,-2.8 1,-0.2 -2,-0.2 0.913 108.7 51.9 -64.3 -44.1 13.2 26.8 9.5 13 341 A T H X S+ 0 0 71 -4,-2.4 4,-1.8 -5,-0.2 -1,-0.2 0.933 111.3 48.0 -54.6 -47.5 17.0 27.2 10.1 14 342 A E H X S+ 0 0 59 -4,-2.0 4,-0.8 2,-0.2 -2,-0.2 0.896 111.0 50.8 -60.7 -44.2 17.4 23.4 10.5 15 343 A L H >< S+ 0 0 2 -4,-2.5 3,-1.2 1,-0.2 -2,-0.2 0.948 110.7 48.6 -58.1 -49.6 15.3 22.8 7.3 16 344 A Q H 3< S+ 0 0 54 -4,-2.8 -1,-0.2 1,-0.3 -2,-0.2 0.816 112.2 49.4 -63.0 -30.6 17.5 25.2 5.3 17 345 A N H 3< S+ 0 0 134 -4,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.579 89.1 116.3 -77.9 -14.4 20.7 23.6 6.7 18 346 A H S X< S- 0 0 41 -3,-1.2 3,-2.0 -4,-0.8 4,-0.4 -0.263 73.0-127.0 -69.7 148.4 19.4 20.1 5.8 19 347 A A T 3 S+ 0 0 88 1,-0.3 3,-0.4 2,-0.2 -1,-0.1 0.792 111.9 47.7 -59.6 -31.3 21.2 17.9 3.2 20 348 A A T 3 S+ 0 0 5 1,-0.2 -1,-0.3 68,-0.1 72,-0.2 0.379 91.6 83.8 -92.7 6.7 17.9 17.4 1.4 21 349 A A X> + 0 0 0 -3,-2.0 3,-2.6 1,-0.2 4,-0.5 0.742 58.1 94.2 -84.0 -24.0 16.9 21.1 1.4 22 350 A W G >4 S+ 0 0 138 -4,-0.4 3,-1.0 -3,-0.4 4,-0.3 0.783 83.7 50.6 -44.2 -44.0 18.8 22.3 -1.7 23 351 A P G 34 S+ 0 0 15 0, 0.0 -1,-0.3 0, 0.0 3,-0.2 0.725 115.4 45.1 -65.4 -17.5 15.9 21.9 -4.3 24 352 A F G <4 S+ 0 0 3 -3,-2.6 22,-3.2 -4,-0.1 23,-0.4 0.313 80.8 97.1-110.8 2.9 13.5 23.8 -2.0 25 353 A L S << S+ 0 0 58 -3,-1.0 22,-0.2 -4,-0.5 -1,-0.1 0.754 94.5 17.3 -69.0 -26.7 15.7 26.8 -0.9 26 354 A Q S S- 0 0 140 -4,-0.3 20,-0.1 -3,-0.2 3,-0.1 -0.934 98.1 -76.5-139.4 162.3 14.2 29.2 -3.5 27 355 A P - 0 0 66 0, 0.0 2,-0.1 0, 0.0 18,-0.1 -0.195 60.0 -91.5 -55.2 150.7 11.1 29.3 -5.7 28 356 A V - 0 0 20 16,-0.1 2,-0.6 1,-0.1 9,-0.0 -0.456 42.6-120.3 -64.6 134.0 11.2 27.1 -8.8 29 357 A N >> - 0 0 88 1,-0.1 4,-1.8 -2,-0.1 3,-0.8 -0.745 14.8-153.3 -80.9 116.9 12.6 29.0 -11.7 30 358 A K T 34 S+ 0 0 139 -2,-0.6 6,-0.2 1,-0.3 -1,-0.1 0.776 93.9 56.9 -62.7 -29.6 10.0 29.2 -14.5 31 359 A E T 34 S+ 0 0 177 1,-0.2 -1,-0.3 2,-0.1 -2,-0.0 0.815 113.1 40.5 -73.6 -28.4 12.7 29.5 -17.2 32 360 A E T <4 S+ 0 0 147 -3,-0.8 -2,-0.2 1,-0.2 -1,-0.2 0.717 131.1 27.8 -88.0 -25.0 14.3 26.2 -16.1 33 361 A V S >< S- 0 0 10 -4,-1.8 3,-1.9 1,-0.1 4,-0.3 -0.612 75.8-177.7-137.4 74.2 10.9 24.5 -15.5 34 362 A P T 3 S+ 0 0 99 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.667 78.4 39.5 -50.6 -34.8 8.5 26.2 -18.0 35 363 A D T >> S+ 0 0 48 1,-0.1 3,-1.6 2,-0.1 4,-0.9 0.413 82.9 105.3 -97.3 0.7 5.3 24.3 -17.1 36 364 A Y H X> S+ 0 0 6 -3,-1.9 4,-2.5 1,-0.3 3,-1.2 0.896 82.6 44.5 -48.1 -50.0 5.8 24.2 -13.3 37 365 A Y H 34 S+ 0 0 66 -4,-0.3 -1,-0.3 1,-0.3 -2,-0.1 0.566 100.5 70.1 -78.6 -6.8 3.2 26.9 -12.4 38 366 A D H <4 S+ 0 0 111 -3,-1.6 -1,-0.3 1,-0.1 -2,-0.2 0.797 116.2 24.5 -71.5 -29.4 0.7 25.5 -14.9 39 367 A F H << S+ 0 0 78 -3,-1.2 2,-0.8 -4,-0.9 -2,-0.2 0.771 112.7 66.3-104.5 -37.6 0.4 22.6 -12.4 40 368 A I < + 0 0 2 -4,-2.5 -1,-0.2 -5,-0.2 34,-0.0 -0.839 52.1 173.1 -96.9 108.6 1.4 23.9 -9.0 41 369 A K S S+ 0 0 157 -2,-0.8 -1,-0.2 1,-0.2 -4,-0.1 0.685 76.1 41.5 -90.2 -19.9 -1.2 26.5 -7.9 42 370 A E S S- 0 0 100 28,-0.1 -1,-0.2 2,-0.0 32,-0.1 -0.666 82.4-172.8-124.8 72.1 0.1 27.1 -4.3 43 371 A P + 0 0 58 0, 0.0 2,-0.3 0, 0.0 28,-0.1 -0.236 6.6 174.4 -66.6 155.2 3.8 27.2 -4.8 44 372 A M + 0 0 24 26,-0.2 2,-0.3 -18,-0.1 -16,-0.1 -0.982 10.1 168.1-158.4 156.5 6.0 27.3 -1.7 45 373 A D > - 0 0 6 -2,-0.3 4,-2.0 -20,-0.1 -20,-0.2 -0.953 48.4 -96.6-162.9 169.1 9.8 27.2 -0.9 46 374 A L H > S+ 0 0 3 -22,-3.2 4,-2.2 -2,-0.3 -21,-0.2 0.755 119.0 55.5 -73.2 -19.7 11.9 27.9 2.2 47 375 A S H > S+ 0 0 36 -23,-0.4 4,-2.2 -22,-0.2 -1,-0.2 0.875 108.8 49.4 -80.4 -35.4 12.9 31.5 1.2 48 376 A T H > S+ 0 0 47 2,-0.2 4,-2.7 1,-0.2 -2,-0.2 0.905 110.5 50.3 -64.4 -43.4 9.2 32.3 1.0 49 377 A M H X S+ 0 0 0 -4,-2.0 4,-2.6 2,-0.2 -2,-0.2 0.929 110.1 50.2 -61.6 -40.9 8.7 30.7 4.4 50 378 A E H X S+ 0 0 63 -4,-2.2 4,-2.4 2,-0.2 -2,-0.2 0.913 111.7 48.0 -60.5 -42.2 11.6 32.7 5.8 51 379 A I H X S+ 0 0 88 -4,-2.2 4,-1.7 2,-0.2 -2,-0.2 0.897 111.6 49.6 -68.6 -40.5 10.0 35.9 4.4 52 380 A K H <>S+ 0 0 57 -4,-2.7 5,-2.7 2,-0.2 6,-0.4 0.935 110.7 50.7 -60.4 -44.3 6.6 35.1 5.8 53 381 A L H ><5S+ 0 0 14 -4,-2.6 3,-1.5 1,-0.2 5,-0.3 0.952 113.2 44.6 -58.9 -49.7 8.2 34.4 9.2 54 382 A E H 3<5S+ 0 0 124 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.754 110.1 56.4 -66.2 -26.7 10.0 37.8 9.2 55 383 A S T 3<5S- 0 0 66 -4,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 0.144 118.4-110.1 -92.2 13.4 6.8 39.6 7.9 56 384 A N T < 5S+ 0 0 123 -3,-1.5 -3,-0.2 1,-0.1 3,-0.2 0.766 77.3 133.2 64.4 31.7 4.8 38.3 10.9 57 385 A K < + 0 0 122 -5,-2.7 2,-0.6 1,-0.2 3,-0.3 0.527 51.9 75.2 -89.0 -8.4 2.7 35.9 8.8 58 386 A Y + 0 0 4 -6,-0.4 -54,-0.2 -5,-0.3 -1,-0.2 -0.522 44.2 138.3-109.5 67.2 3.0 32.9 11.1 59 387 A Q S S+ 0 0 133 -2,-0.6 2,-0.5 -3,-0.2 -1,-0.2 0.748 73.5 47.6 -70.6 -35.4 0.7 33.7 14.1 60 388 A K S >> S- 0 0 120 -3,-0.3 3,-1.5 1,-0.1 4,-0.9 -0.967 78.0-141.0-111.2 129.9 -0.5 30.1 14.1 61 389 A M H >> S+ 0 0 1 -2,-0.5 4,-2.3 1,-0.3 3,-0.7 0.864 101.9 69.9 -53.9 -37.3 2.0 27.2 14.0 62 390 A E H 3> S+ 0 0 94 1,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.810 93.2 55.0 -49.7 -37.3 -0.6 25.6 11.7 63 391 A D H <> S+ 0 0 59 -3,-1.5 4,-1.7 2,-0.2 -1,-0.2 0.874 108.6 47.4 -67.0 -35.9 0.2 28.1 8.9 64 392 A F H - 0 0 15 34,-0.4 3,-1.9 -2,-0.2 6,-0.4 -0.305 29.6-117.9 -66.9 149.6 8.0 11.2 -10.6 81 409 A E T 3 S+ 0 0 128 1,-0.3 -1,-0.1 5,-0.1 -2,-0.0 0.699 114.3 54.6 -62.8 -18.6 8.2 8.8 -7.7 82 410 A N T 3 S+ 0 0 155 4,-0.1 -1,-0.3 5,-0.0 2,-0.1 0.391 88.9 102.8 -94.8 1.9 11.5 7.6 -9.1 83 411 A T S <> S- 0 0 51 -3,-1.9 4,-1.7 1,-0.1 3,-0.2 -0.437 80.5-119.0 -86.5 160.0 13.2 11.0 -9.2 84 412 A S H > S+ 0 0 74 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.872 113.1 60.1 -59.7 -38.2 15.8 12.5 -6.8 85 413 A Y H > S+ 0 0 46 2,-0.2 4,-2.9 1,-0.2 -1,-0.2 0.900 103.0 50.2 -59.3 -41.8 13.3 15.3 -6.0 86 414 A Y H > S+ 0 0 51 -6,-0.4 4,-2.3 2,-0.2 -1,-0.2 0.937 111.5 49.4 -62.8 -44.9 10.7 12.9 -4.7 87 415 A K H X S+ 0 0 165 -4,-1.7 4,-2.4 2,-0.2 -2,-0.2 0.921 110.5 49.4 -59.2 -47.0 13.4 11.3 -2.6 88 416 A Y H X S+ 0 0 67 -4,-2.9 4,-3.1 1,-0.2 5,-0.3 0.947 109.4 52.7 -60.2 -47.0 14.5 14.7 -1.2 89 417 A A H X S+ 0 0 0 -4,-2.9 4,-2.6 1,-0.2 5,-0.2 0.934 110.5 47.2 -53.2 -46.2 10.9 15.6 -0.4 90 418 A N H X S+ 0 0 75 -4,-2.3 4,-2.4 1,-0.2 -1,-0.2 0.944 114.4 46.6 -63.2 -45.2 10.4 12.4 1.6 91 419 A R H X S+ 0 0 138 -4,-2.4 4,-2.1 1,-0.2 -1,-0.2 0.919 113.3 47.3 -62.8 -47.4 13.7 12.8 3.5 92 420 A L H X S+ 0 0 0 -4,-3.1 4,-2.8 1,-0.2 -1,-0.2 0.882 112.4 51.1 -65.1 -35.6 13.1 16.5 4.3 93 421 A E H X S+ 0 0 31 -4,-2.6 4,-3.3 -5,-0.3 5,-0.2 0.929 107.5 51.0 -66.7 -44.9 9.5 15.7 5.4 94 422 A K H X S+ 0 0 128 -4,-2.4 4,-2.0 -5,-0.2 -1,-0.2 0.938 113.6 47.0 -55.8 -45.7 10.6 12.9 7.8 95 423 A F H X S+ 0 0 38 -4,-2.1 4,-2.6 -5,-0.2 -2,-0.2 0.947 112.1 49.2 -61.2 -48.8 13.1 15.3 9.3 96 424 A F H X S+ 0 0 0 -4,-2.8 4,-2.2 1,-0.2 5,-0.3 0.921 109.1 52.3 -55.6 -49.4 10.5 18.0 9.6 97 425 A N H X S+ 0 0 42 -4,-3.3 4,-2.8 1,-0.2 -1,-0.2 0.914 111.6 46.7 -56.9 -45.7 8.0 15.7 11.3 98 426 A N H X S+ 0 0 97 -4,-2.0 4,-1.8 -5,-0.2 -1,-0.2 0.924 110.7 52.0 -61.3 -46.8 10.6 14.6 13.9 99 427 A K H < S+ 0 0 43 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.860 117.7 37.4 -61.0 -39.5 11.7 18.2 14.6 100 428 A V H >< S+ 0 0 0 -4,-2.2 3,-1.9 -5,-0.2 6,-0.3 0.919 113.4 55.0 -79.1 -44.1 8.2 19.4 15.2 101 429 A K H 3< S+ 0 0 104 -4,-2.8 -2,-0.2 -5,-0.3 -3,-0.2 0.805 98.8 64.2 -61.4 -26.3 6.9 16.3 17.0 102 430 A E T 3< S+ 0 0 126 -4,-1.8 -1,-0.3 -5,-0.2 -2,-0.1 0.516 85.0 80.5 -78.4 -5.9 9.7 16.5 19.5 103 431 A I S X> S- 0 0 39 -3,-1.9 3,-2.2 1,-0.2 4,-0.7 -0.913 78.8-147.5 -98.8 110.1 8.4 19.8 20.9 104 432 A P G >4 S+ 0 0 97 0, 0.0 3,-1.1 0, 0.0 4,-0.4 0.823 92.4 60.8 -50.0 -39.7 5.6 18.7 23.2 105 433 A E G 34 S+ 0 0 132 1,-0.2 3,-0.1 2,-0.1 -4,-0.1 0.709 114.8 34.4 -60.4 -24.2 3.4 21.8 22.5 106 434 A Y G X4 S+ 0 0 20 -3,-2.2 3,-2.0 -6,-0.3 -1,-0.2 0.358 84.7 101.9-114.5 4.9 3.2 21.0 18.8 107 435 A S G X< S+ 0 0 43 -3,-1.1 3,-1.5 -4,-0.7 -2,-0.1 0.819 74.8 65.0 -61.4 -30.3 3.1 17.1 18.9 108 436 A H G 3 S+ 0 0 137 -4,-0.4 -1,-0.3 1,-0.3 -2,-0.1 0.635 95.6 60.3 -65.0 -15.0 -0.7 17.2 18.3 109 437 A L G < 0 0 34 -3,-2.0 -1,-0.3 -9,-0.1 -2,-0.2 0.437 360.0 360.0 -94.9 -1.2 -0.0 18.7 14.8 110 438 A I < 0 0 48 -3,-1.5 -1,-0.0 -4,-0.2 -13,-0.0 -0.983 360.0 360.0-127.1 360.0 2.1 15.8 13.5 111 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 112 15 P A 0 0 133 0, 0.0 2,-0.4 0, 0.0 -79,-0.1 0.000 360.0 360.0 360.0 152.8 16.5 18.6 -15.1 113 16 P X + 0 0 32 -81,-0.2 2,-0.3 -34,-0.0 -34,-0.0 -0.808 360.0 161.6 -90.4 133.0 13.2 18.8 -13.3 114 17 P R - 0 0 201 -2,-0.4 -34,-0.4 -81,-0.1 -81,-0.0 -0.994 44.6 -80.9-153.5 149.9 10.2 18.0 -15.4 115 18 P H 0 0 63 -2,-0.3 -36,-0.2 -36,-0.1 -37,-0.1 -0.245 360.0 360.0 -52.3 132.8 6.5 17.0 -15.0 116 19 P R 0 0 143 -38,-2.5 -1,-0.1 -39,-0.2 -37,-0.1 -0.185 360.0 360.0 -64.8 360.0 6.0 13.3 -14.2