==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 05-JAN-07 2E6W . COMPND 2 MOLECULE: CALSENILIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR L.YU,C.SUN,R.MENDOZA,E.HEBERT,A.PEREDA-LOPEZ,P.J.HAJDUK, . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7704.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 57.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 41 42.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 161 A G 0 0 88 0, 0.0 4,-0.3 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -23.8 435.2 360.0 365.7 2 162 A T - 0 0 100 3,-0.1 4,-0.4 2,-0.1 0, 0.0 0.243 360.0 -98.9 63.3 167.5 438.8 358.8 365.0 3 163 A V S > S+ 0 0 78 2,-0.2 4,-1.7 3,-0.1 3,-0.1 0.843 117.9 54.2 -88.7 -38.5 442.0 360.7 365.8 4 164 A H H > S+ 0 0 133 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.891 106.4 52.3 -63.4 -41.5 442.6 362.0 362.3 5 165 A E H > S+ 0 0 125 -4,-0.3 4,-0.8 1,-0.2 -1,-0.2 0.808 110.8 48.8 -65.2 -29.6 439.2 363.6 362.1 6 166 A K H > S+ 0 0 97 -4,-0.4 4,-1.7 2,-0.2 -1,-0.2 0.804 106.0 57.1 -79.3 -31.3 439.8 365.3 365.4 7 167 A L H X S+ 0 0 10 -4,-1.7 4,-1.6 1,-0.2 -2,-0.2 0.933 108.3 45.1 -64.9 -47.3 443.2 366.6 364.3 8 168 A K H X S+ 0 0 129 -4,-1.9 4,-1.8 1,-0.2 -1,-0.2 0.801 108.1 60.5 -66.5 -28.9 441.8 368.5 361.3 9 169 A W H X S+ 0 0 121 -4,-0.8 4,-1.3 -5,-0.2 -1,-0.2 0.906 103.8 48.4 -65.0 -42.9 439.1 369.8 363.6 10 170 A A H X S+ 0 0 10 -4,-1.7 4,-1.5 1,-0.2 -1,-0.2 0.886 110.3 51.6 -64.9 -40.0 441.6 371.5 365.9 11 171 A F H X S+ 0 0 7 -4,-1.6 4,-2.8 1,-0.2 -1,-0.2 0.863 105.7 55.5 -65.1 -36.5 443.3 373.1 362.9 12 172 A N H < S+ 0 0 87 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.831 109.9 46.2 -65.2 -32.3 440.0 374.4 361.6 13 173 A L H < S+ 0 0 72 -4,-1.3 -1,-0.2 -3,-0.2 -2,-0.2 0.758 118.7 42.5 -80.5 -26.5 439.5 376.2 364.9 14 174 A Y H < S+ 0 0 0 -4,-1.5 2,-1.1 1,-0.2 -2,-0.2 0.961 100.9 66.6 -82.4 -63.4 443.0 377.5 364.9 15 175 A D < - 0 0 1 -4,-2.8 -1,-0.2 1,-0.2 7,-0.1 -0.468 63.3-177.2 -64.8 97.3 443.5 378.6 361.3 16 176 A I S S+ 0 0 112 -2,-1.1 -1,-0.2 1,-0.2 6,-0.1 0.925 83.7 42.6 -63.4 -47.6 441.0 381.5 361.2 17 177 A N S S- 0 0 94 4,-0.2 -1,-0.2 -3,-0.1 -2,-0.1 0.670 101.8-137.9 -73.7 -17.0 441.6 382.3 357.5 18 178 A K + 0 0 137 -7,-0.2 -2,-0.1 1,-0.1 4,-0.1 0.896 59.4 135.7 59.4 44.6 441.6 378.5 356.8 19 179 A D S S- 0 0 77 2,-0.3 -1,-0.1 0, 0.0 3,-0.1 0.359 78.1-108.2-100.7 2.7 444.6 378.9 354.4 20 180 A G S S+ 0 0 21 1,-0.1 52,-1.5 -9,-0.1 2,-0.5 0.449 94.3 98.1 84.6 0.0 446.4 375.8 355.8 21 181 A Y E -A 71 0A 103 50,-0.2 2,-0.6 51,-0.1 -2,-0.3 -0.961 59.1-157.3-127.2 115.4 448.9 378.1 357.5 22 182 A I E -A 70 0A 1 48,-2.3 48,-2.2 -2,-0.5 2,-0.1 -0.808 18.1-165.2 -92.5 119.8 448.7 379.1 361.1 23 183 A T > - 0 0 38 -2,-0.6 4,-1.6 46,-0.2 5,-0.1 -0.422 35.3-103.0 -98.6 174.7 450.6 382.3 361.9 24 184 A K H > S+ 0 0 132 44,-0.3 4,-1.8 1,-0.2 5,-0.1 0.864 122.9 53.8 -63.9 -37.1 451.8 383.9 365.1 25 185 A E H > S+ 0 0 162 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.870 107.7 50.6 -65.2 -37.0 448.9 386.4 364.8 26 186 A E H > S+ 0 0 12 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.829 108.6 52.4 -69.5 -32.4 446.4 383.6 364.5 27 187 A M H X S+ 0 0 13 -4,-1.6 4,-2.0 2,-0.2 -2,-0.2 0.847 105.0 55.3 -71.5 -35.1 447.9 381.9 367.6 28 188 A L H X S+ 0 0 100 -4,-1.8 4,-1.3 1,-0.2 -2,-0.2 0.885 106.4 50.8 -64.9 -39.6 447.5 385.1 369.6 29 189 A A H X S+ 0 0 37 -4,-1.4 4,-2.4 1,-0.2 -1,-0.2 0.873 109.5 50.7 -65.8 -38.0 443.8 385.2 368.8 30 190 A I H X S+ 0 0 6 -4,-1.4 4,-2.6 2,-0.2 -2,-0.2 0.898 107.5 52.6 -66.9 -41.0 443.4 381.6 369.9 31 191 A M H < S+ 0 0 36 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.808 115.7 41.5 -64.9 -30.0 445.2 382.3 373.3 32 192 A K H < S+ 0 0 182 -4,-1.3 3,-0.3 -5,-0.1 -2,-0.2 0.811 118.5 45.4 -86.0 -34.0 442.8 385.2 373.9 33 193 A S H < S+ 0 0 83 -4,-2.4 2,-1.5 1,-0.2 3,-0.5 0.981 113.1 46.8 -72.5 -60.6 439.7 383.4 372.7 34 194 A I S < S+ 0 0 26 -4,-2.6 -1,-0.2 1,-0.2 62,-0.0 -0.642 90.9 81.9 -87.2 84.8 440.2 380.0 374.4 35 195 A Y + 0 0 89 -2,-1.5 3,-0.3 -3,-0.3 -1,-0.2 0.202 54.7 109.1-167.9 15.9 441.0 381.1 377.9 36 196 A D S S+ 0 0 148 -3,-0.5 2,-1.0 1,-0.2 -2,-0.1 0.923 90.2 2.6 -65.0 -98.6 437.7 381.9 379.6 37 197 A M + 0 0 176 58,-0.1 2,-0.5 1,-0.1 -1,-0.2 -0.790 68.3 165.0 -98.1 96.6 436.9 379.2 382.2 38 198 A M - 0 0 56 -2,-1.0 2,-0.2 -3,-0.3 -1,-0.1 -0.503 64.3 -28.5-109.1 61.8 439.8 376.8 382.4 39 199 A G - 0 0 50 -2,-0.5 -1,-0.1 1,-0.1 4,-0.1 -0.597 50.8-119.7 122.5 175.3 439.0 375.0 385.6 40 200 A R S S+ 0 0 223 -2,-0.2 -1,-0.1 2,-0.1 3,-0.0 0.496 95.7 10.6-128.7 -19.3 437.3 375.6 389.0 41 201 A H S S- 0 0 171 1,-0.1 2,-0.5 0, 0.0 0, 0.0 0.378 120.6 -16.8-123.7-100.9 440.2 375.1 391.4 42 202 A T + 0 0 124 2,-0.0 -2,-0.1 1,-0.0 -1,-0.1 -0.974 52.7 161.1-123.2 124.5 443.9 374.8 390.5 43 203 A Y + 0 0 143 -2,-0.5 2,-1.3 -4,-0.1 3,-0.3 -0.576 7.9 177.2-141.2 74.4 445.1 374.0 387.0 44 204 A P + 0 0 103 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 -0.643 41.0 112.9 -83.4 91.1 448.8 374.9 386.5 45 205 A I S S+ 0 0 72 -2,-1.3 43,-0.0 1,-0.0 0, 0.0 0.299 78.3 36.8-137.9 1.2 449.6 373.7 383.0 46 206 A L - 0 0 30 -3,-0.3 2,-1.6 2,-0.0 8,-0.0 -0.383 64.0-173.1-156.8 68.5 450.2 377.1 381.2 47 207 A R - 0 0 205 1,-0.1 2,-1.3 -3,-0.1 3,-0.1 -0.493 12.0-164.1 -69.4 89.4 452.0 379.6 383.4 48 208 A E + 0 0 80 -2,-1.6 -1,-0.1 1,-0.2 -2,-0.0 -0.637 30.0 150.3 -80.5 94.7 451.8 382.6 381.1 49 209 A D + 0 0 138 -2,-1.3 -1,-0.2 1,-0.2 -2,-0.0 0.356 67.3 29.4-104.6 2.1 454.3 385.0 382.6 50 210 A A - 0 0 31 -3,-0.1 4,-0.4 1,-0.1 3,-0.3 -0.979 69.8-128.8-160.2 147.5 455.1 386.6 379.2 51 211 A P S S+ 0 0 120 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 0.762 106.6 42.3 -68.9 -25.4 453.4 387.4 375.9 52 212 A A S S+ 0 0 67 1,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.839 92.3 72.8-127.8 94.7 456.3 385.8 374.0 53 213 A E S > S+ 0 0 127 -2,-0.5 4,-1.0 -3,-0.3 5,-0.1 0.232 92.5 44.5-162.0 -51.8 457.6 382.6 375.5 54 214 A H H > S+ 0 0 93 -4,-0.4 4,-0.7 1,-0.2 -2,-0.1 0.509 112.6 56.9 -85.3 -5.6 455.2 379.7 375.0 55 215 A V H > S+ 0 0 19 2,-0.2 4,-2.2 3,-0.1 5,-0.2 0.818 101.8 52.0 -92.2 -37.7 454.7 380.7 371.4 56 216 A E H > S+ 0 0 134 2,-0.2 4,-2.4 1,-0.2 -2,-0.2 0.923 113.8 43.6 -65.1 -45.7 458.4 380.6 370.3 57 217 A R H X S+ 0 0 203 -4,-1.0 4,-1.4 2,-0.2 -1,-0.2 0.913 115.5 48.1 -66.4 -44.0 458.9 377.0 371.6 58 218 A F H X S+ 0 0 25 -4,-0.7 4,-0.8 1,-0.2 -1,-0.2 0.857 116.0 44.7 -65.1 -35.8 455.6 375.8 370.2 59 219 A F H X S+ 0 0 24 -4,-2.2 4,-2.6 2,-0.2 -2,-0.2 0.842 108.8 55.9 -76.9 -35.3 456.4 377.5 366.8 60 220 A E H < S+ 0 0 136 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.781 114.9 39.9 -67.4 -26.9 460.0 376.2 366.8 61 221 A K H < S+ 0 0 125 -4,-1.4 -1,-0.2 -5,-0.1 -2,-0.2 0.614 119.9 46.3 -95.5 -16.7 458.6 372.6 367.2 62 222 A M H < S+ 0 0 2 -4,-0.8 2,-0.7 -5,-0.2 9,-0.2 0.923 94.9 73.1 -89.3 -57.1 455.7 373.2 364.8 63 223 A D < + 0 0 7 -4,-2.6 7,-0.1 1,-0.2 -1,-0.1 -0.478 57.3 179.4 -64.9 108.4 457.3 374.9 361.8 64 224 A R S S+ 0 0 168 -2,-0.7 -1,-0.2 1,-0.2 6,-0.1 0.958 84.3 32.1 -75.6 -54.3 459.3 372.1 360.1 65 225 A N S S- 0 0 105 4,-0.2 -1,-0.2 1,-0.0 -2,-0.1 0.611 102.4-134.3 -78.3 -12.3 460.8 374.1 357.2 66 226 A Q + 0 0 132 -7,-0.1 4,-0.1 3,-0.1 -3,-0.1 0.890 52.4 150.5 59.0 43.8 460.8 377.2 359.5 67 227 A D S S- 0 0 85 2,-0.4 -1,-0.1 1,-0.0 3,-0.1 0.508 74.1 -95.8 -82.3 -4.9 459.3 379.4 356.8 68 228 A G S S+ 0 0 51 1,-0.2 2,-0.3 -9,-0.1 -44,-0.3 0.284 101.3 69.4 108.6 -9.0 457.7 381.6 359.4 69 229 A V S S- 0 0 35 -46,-0.1 -2,-0.4 -45,-0.1 2,-0.3 -0.999 75.6-123.3-143.8 143.1 454.3 379.9 359.5 70 230 A V E -A 22 0A 1 -48,-2.2 -48,-2.3 -2,-0.3 2,-0.3 -0.605 28.1-156.4 -84.8 143.3 453.0 376.5 360.6 71 231 A T E > -A 21 0A 13 -2,-0.3 4,-2.9 -50,-0.2 -50,-0.2 -0.798 29.4-112.8-118.9 163.5 451.2 374.3 358.0 72 232 A I H > S+ 0 0 54 -52,-1.5 4,-2.0 -2,-0.3 5,-0.2 0.817 118.0 54.5 -61.6 -31.8 448.6 371.5 358.3 73 233 A E H > S+ 0 0 159 -53,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.892 113.4 40.4 -68.7 -41.5 451.2 369.1 357.0 74 234 A E H > S+ 0 0 8 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.863 114.3 52.7 -75.1 -38.9 453.7 370.0 359.7 75 235 A F H X S+ 0 0 2 -4,-2.9 4,-2.1 2,-0.2 -2,-0.2 0.902 112.3 44.9 -64.1 -42.3 451.1 370.2 362.4 76 236 A L H X S+ 0 0 58 -4,-2.0 4,-0.9 -5,-0.2 -1,-0.2 0.850 115.7 47.4 -70.2 -35.0 449.8 366.7 361.6 77 237 A E H < S+ 0 0 111 -4,-1.4 -2,-0.2 -5,-0.2 -1,-0.2 0.833 116.6 43.3 -74.7 -33.7 453.4 365.4 361.4 78 238 A A H >X S+ 0 0 11 -4,-2.4 4,-1.8 1,-0.2 3,-0.9 0.791 105.9 62.0 -81.1 -30.5 454.4 367.0 364.6 79 239 A C H 3< S+ 0 0 5 -4,-2.1 7,-0.2 1,-0.3 -1,-0.2 0.810 107.8 44.3 -65.0 -29.9 451.2 366.1 366.4 80 240 A Q T 3< S+ 0 0 127 -4,-0.9 -1,-0.3 1,-0.2 -2,-0.2 0.428 111.7 55.3 -93.2 -1.0 452.1 362.4 365.9 81 241 A K T <4 S+ 0 0 167 -3,-0.9 2,-0.4 1,-0.2 -2,-0.2 0.708 109.7 43.3-100.6 -28.1 455.7 363.0 366.9 82 242 A D X - 0 0 50 -4,-1.8 4,-0.6 1,-0.1 -1,-0.2 -0.953 52.7-170.4-123.6 141.2 455.0 364.6 370.3 83 243 A E H > S+ 0 0 161 -2,-0.4 4,-1.6 2,-0.1 -1,-0.1 0.771 88.3 55.8 -95.5 -33.4 452.6 363.6 373.0 84 244 A N H > S+ 0 0 128 2,-0.2 4,-1.5 1,-0.2 5,-0.1 0.931 111.5 43.0 -65.0 -47.1 452.9 366.6 375.3 85 245 A I H > S+ 0 0 27 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.899 113.5 51.6 -66.0 -41.9 452.0 369.0 372.5 86 246 A M H X S+ 0 0 44 -4,-0.6 4,-1.1 1,-0.2 -1,-0.2 0.810 107.1 55.2 -65.0 -30.0 449.2 366.8 371.2 87 247 A S H X S+ 0 0 58 -4,-1.6 4,-0.7 2,-0.2 -1,-0.2 0.872 107.8 47.9 -70.8 -37.9 447.8 366.7 374.8 88 248 A S H >X S+ 0 0 35 -4,-1.5 4,-0.9 1,-0.2 3,-0.6 0.886 110.2 51.4 -69.9 -40.0 447.7 370.5 375.0 89 249 A M H 3X S+ 0 0 17 -4,-2.0 4,-0.9 1,-0.2 -1,-0.2 0.784 105.3 57.4 -67.6 -27.2 445.9 370.8 371.6 90 250 A Q H 3X S+ 0 0 88 -4,-1.1 4,-1.4 1,-0.2 -1,-0.2 0.727 98.3 61.2 -75.2 -22.4 443.4 368.3 372.8 91 251 A L H < S+ 0 0 32 -4,-0.9 3,-0.6 1,-0.2 -1,-0.2 0.789 116.7 48.7 -75.9 -28.7 438.8 371.1 371.8 94 254 A N H 3< S+ 0 0 121 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.505 94.6 76.4 -87.6 -5.7 437.8 369.5 375.1 95 255 A V T 3< 0 0 58 -4,-0.7 -1,-0.2 -3,-0.3 -2,-0.2 0.642 360.0 360.0 -78.1 -15.1 437.5 373.0 376.6 96 256 A I < 0 0 177 -3,-0.6 -62,-0.0 -4,-0.2 0, 0.0 -0.811 360.0 360.0-112.8 360.0 434.2 373.5 374.8