==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 05-JAN-07 2E6Z . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION FACTOR SPT5; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4930.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 55.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 32.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 413 A G 0 0 131 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-148.6 -8.3 1.0 24.2 2 414 A S - 0 0 133 1,-0.1 0, 0.0 3,-0.0 0, 0.0 -0.857 360.0-157.4-135.7 170.1 -9.5 1.4 20.7 3 415 A S - 0 0 134 -2,-0.3 -1,-0.1 0, 0.0 2,-0.1 0.756 58.7 -67.3-112.5 -63.8 -11.2 -0.6 17.9 4 416 A G - 0 0 64 5,-0.0 3,-0.1 2,-0.0 5,-0.0 -0.419 40.3-110.4 162.0 119.5 -10.6 0.9 14.5 5 417 A S - 0 0 122 1,-0.2 2,-0.4 -2,-0.1 -3,-0.0 -0.043 53.0 -82.3 -54.9 162.0 -11.6 4.1 12.7 6 418 A S S S+ 0 0 138 3,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.556 94.5 46.7 -72.9 122.9 -14.0 3.9 9.8 7 419 A G S S- 0 0 63 -2,-0.4 2,-0.1 -3,-0.1 24,-0.0 -0.990 94.7 -12.0 148.4-155.8 -12.1 2.9 6.6 8 420 A F - 0 0 130 -2,-0.3 25,-0.1 25,-0.2 23,-0.1 -0.452 56.6-141.7 -80.2 153.7 -9.6 0.4 5.3 9 421 A Q > - 0 0 134 -2,-0.1 3,-0.8 21,-0.1 19,-0.1 -0.923 15.7-114.9-120.1 143.5 -7.5 -1.7 7.6 10 422 A P T 3 S+ 0 0 55 0, 0.0 19,-0.2 0, 0.0 3,-0.1 -0.237 88.2 56.9 -69.8 160.4 -3.8 -2.7 7.3 11 423 A G T 3 S+ 0 0 37 17,-1.8 18,-0.1 1,-0.4 19,-0.0 -0.112 76.3 113.2 110.0 -35.7 -2.7 -6.3 6.8 12 424 A D S < S- 0 0 91 -3,-0.8 16,-2.0 15,-0.1 2,-0.6 -0.271 71.5-112.4 -68.6 156.8 -4.6 -7.0 3.6 13 425 A N E +A 27 0A 55 14,-0.2 46,-0.7 -3,-0.1 2,-0.2 -0.831 47.8 157.2 -97.1 120.0 -2.8 -7.6 0.4 14 426 A V E -AB 26 58A 8 12,-2.1 12,-2.1 -2,-0.6 2,-0.3 -0.800 23.4-149.0-133.0 174.9 -3.3 -4.9 -2.3 15 427 A E E -AB 25 57A 55 42,-2.2 42,-2.1 10,-0.2 2,-0.3 -0.965 29.6 -92.3-145.2 160.1 -1.5 -3.5 -5.4 16 428 A V E - B 0 56A 1 8,-2.2 7,-1.3 5,-0.4 8,-0.3 -0.559 29.4-176.5 -76.6 133.5 -1.1 -0.2 -7.2 17 429 A C + 0 0 58 38,-2.1 2,-0.3 1,-0.3 -1,-0.2 0.846 68.2 10.5 -95.1 -44.8 -3.6 0.4 -10.0 18 430 A E S S+ 0 0 132 37,-0.6 -1,-0.3 36,-0.2 2,-0.2 -0.911 93.5 52.4-134.5 161.5 -2.3 3.7 -11.4 19 431 A G S > S- 0 0 32 -2,-0.3 3,-0.6 1,-0.2 -3,-0.0 -0.688 96.9 -53.9 113.5-168.2 0.8 5.9 -11.0 20 432 A E T 3 S+ 0 0 179 -2,-0.2 -1,-0.2 1,-0.2 -4,-0.0 0.814 132.4 55.5 -80.1 -32.7 4.6 5.3 -11.3 21 433 A L T > S+ 0 0 58 -3,-0.2 3,-0.6 3,-0.1 -5,-0.4 0.094 83.0 148.5 -87.2 23.6 4.5 2.4 -8.8 22 434 A I T < + 0 0 68 -3,-0.6 -5,-0.2 1,-0.2 3,-0.1 -0.061 58.0 29.6 -54.6 159.8 1.9 0.6 -10.9 23 435 A N T 3 S+ 0 0 113 -7,-1.3 2,-0.6 1,-0.2 -1,-0.2 0.815 90.2 137.5 56.2 31.2 1.8 -3.2 -11.0 24 436 A L < - 0 0 29 -3,-0.6 -8,-2.2 -8,-0.3 -1,-0.2 -0.929 32.5-172.6-114.4 112.7 3.2 -3.1 -7.5 25 437 A Q E +A 15 0A 87 -2,-0.6 16,-1.5 -10,-0.3 2,-0.3 -0.589 19.3 127.2 -99.5 162.9 1.8 -5.5 -5.0 26 438 A G E -AC 14 40A 0 -12,-2.1 -12,-2.1 14,-0.2 2,-0.3 -0.974 51.7 -72.6 171.0 179.6 2.4 -5.7 -1.2 27 439 A K E -AC 13 39A 115 12,-1.3 12,-2.2 -2,-0.3 2,-0.3 -0.748 41.9-118.6-101.3 148.0 0.9 -5.9 2.3 28 440 A I E - C 0 38A 17 -16,-2.0 -17,-1.8 -2,-0.3 10,-0.2 -0.670 25.1-179.7 -86.8 136.5 -0.7 -3.0 4.1 29 441 A L - 0 0 85 8,-1.3 2,-0.3 1,-0.4 9,-0.2 0.854 63.7 -18.0 -98.5 -51.1 0.9 -1.8 7.4 30 442 A S - 0 0 62 7,-2.7 2,-0.5 -21,-0.1 -1,-0.4 -0.918 57.2-118.8-149.9 173.6 -1.4 1.1 8.5 31 443 A V - 0 0 51 -2,-0.3 2,-0.8 5,-0.2 5,-0.2 -0.964 17.0-173.9-126.8 116.7 -4.0 3.5 7.2 32 444 A D B > -D 35 0A 74 3,-2.1 3,-2.6 -2,-0.5 -2,-0.0 -0.719 48.8-100.1-109.7 80.8 -3.4 7.3 7.3 33 445 A G T 3 S+ 0 0 67 -2,-0.8 -25,-0.2 1,-0.3 -1,-0.2 -0.182 108.8 1.6 45.4-111.2 -6.7 8.8 6.2 34 446 A N T 3 S+ 0 0 117 -3,-0.1 19,-2.6 18,-0.1 -1,-0.3 0.820 132.3 65.7 -73.1 -31.9 -6.1 9.7 2.5 35 447 A K E < -DE 32 52A 108 -3,-2.6 -3,-2.1 17,-0.2 2,-0.5 -0.689 69.9-155.6 -94.0 145.9 -2.6 8.3 2.7 36 448 A I E - E 0 51A 8 15,-2.7 15,-2.7 -2,-0.3 2,-0.7 -0.951 5.2-150.7-126.4 113.3 -1.9 4.6 3.2 37 449 A T E + E 0 50A 25 -2,-0.5 -7,-2.7 -7,-0.3 -8,-1.3 -0.720 35.6 146.4 -85.2 115.7 1.4 3.5 4.6 38 450 A I E -CE 28 49A 3 11,-2.6 11,-2.6 -2,-0.7 -10,-0.2 -0.723 43.1-116.7-135.4-175.0 2.4 0.0 3.3 39 451 A M E -C 27 0A 78 -12,-2.2 -12,-1.3 9,-0.2 9,-0.1 -0.961 23.0-135.8-136.6 117.8 5.4 -2.1 2.4 40 452 A P E -C 26 0A 7 0, 0.0 2,-1.3 0, 0.0 -14,-0.2 -0.361 21.5-119.4 -69.8 147.3 6.1 -3.4 -1.1 41 453 A K + 0 0 146 -16,-1.5 2,-0.3 -2,-0.1 -16,-0.1 -0.670 67.6 118.1 -90.8 85.0 7.3 -7.0 -1.6 42 454 A H - 0 0 115 -2,-1.3 3,-0.4 3,-0.3 -16,-0.0 -0.949 57.2-147.0-153.1 128.5 10.7 -6.6 -3.3 43 455 A E S S+ 0 0 193 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.0 0.916 101.0 61.9 -58.8 -45.4 14.2 -7.5 -2.2 44 456 A D S S+ 0 0 126 2,-0.1 2,-0.4 1,-0.0 -1,-0.2 0.880 97.7 67.9 -48.2 -43.4 15.6 -4.4 -4.0 45 457 A L + 0 0 71 -3,-0.4 -3,-0.3 1,-0.1 3,-0.0 -0.688 57.0 177.7 -85.1 129.0 13.6 -2.2 -1.6 46 458 A K + 0 0 164 -2,-0.4 2,-0.3 2,-0.1 -1,-0.1 -0.202 59.4 57.7-122.3 40.3 14.6 -2.3 2.0 47 459 A D S S- 0 0 116 -7,-0.1 2,-0.1 0, 0.0 -2,-0.0 -0.985 80.6-100.1-162.4 159.7 12.1 0.2 3.4 48 460 A M - 0 0 115 -2,-0.3 2,-0.3 -9,-0.1 -9,-0.2 -0.459 33.5-157.5 -84.4 158.3 8.4 1.0 3.8 49 461 A L E -E 38 0A 44 -11,-2.6 -11,-2.6 -2,-0.1 2,-0.4 -0.901 9.6-136.7-133.9 162.5 6.5 3.4 1.5 50 462 A E E +E 37 0A 90 -2,-0.3 -13,-0.3 -13,-0.3 -11,-0.0 -0.980 23.1 175.7-126.3 124.3 3.3 5.4 1.7 51 463 A F E -E 36 0A 9 -15,-2.7 -15,-2.7 -2,-0.4 2,-0.1 -0.922 33.9-100.4-127.3 152.1 0.8 5.7 -1.2 52 464 A P E >> -E 35 0A 40 0, 0.0 4,-2.1 0, 0.0 3,-1.4 -0.385 33.4-114.0 -69.7 144.5 -2.6 7.4 -1.5 53 465 A A T 34 S+ 0 0 36 -19,-2.6 -18,-0.1 1,-0.3 -19,-0.1 0.782 119.7 58.8 -47.2 -28.9 -5.8 5.3 -1.3 54 466 A Q T 34 S+ 0 0 175 -20,-0.3 -1,-0.3 1,-0.2 -36,-0.2 0.883 105.8 45.8 -69.8 -39.7 -6.3 6.2 -5.0 55 467 A E T <4 S+ 0 0 57 -3,-1.4 -38,-2.1 -38,-0.1 -37,-0.6 0.848 109.6 64.7 -71.6 -35.1 -2.9 4.7 -6.0 56 468 A L E < -B 16 0A 13 -4,-2.1 2,-0.3 -40,-0.2 -40,-0.2 -0.691 65.9-176.4 -92.6 143.4 -3.6 1.6 -3.9 57 469 A R E -B 15 0A 163 -42,-2.1 -42,-2.2 -2,-0.3 2,-0.5 -1.000 26.9-119.5-142.1 139.0 -6.4 -0.8 -4.8 58 470 A K E B 14 0A 158 -2,-0.3 -44,-0.2 -44,-0.2 -42,-0.0 -0.643 360.0 360.0 -80.0 124.9 -7.7 -4.0 -3.1 59 471 A Y 0 0 175 -46,-0.7 -1,-0.2 -2,-0.5 -45,-0.1 0.484 360.0 360.0-116.6 360.0 -7.5 -7.1 -5.4