==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 05-JAN-07 2E70 . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION FACTOR SPT5; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6066.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 54.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 28.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 15.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 687 A G 0 0 128 0, 0.0 2,-1.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-166.3 27.3 13.0 -16.2 2 688 A S + 0 0 140 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.632 360.0 147.1 -87.5 83.4 27.9 9.4 -15.2 3 689 A S + 0 0 123 -2,-1.5 2,-0.3 2,-0.0 0, 0.0 -0.890 15.4 162.6-120.1 150.0 27.9 9.7 -11.4 4 690 A G - 0 0 71 -2,-0.3 2,-0.5 0, 0.0 4,-0.1 -0.942 43.6 -75.1-154.7 174.5 26.8 7.3 -8.7 5 691 A S - 0 0 99 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.662 35.9-133.1 -81.8 125.0 27.0 6.5 -5.0 6 692 A S S S+ 0 0 129 -2,-0.5 2,-0.4 2,-0.1 -1,-0.1 0.871 95.3 48.8 -40.3 -48.1 30.3 4.8 -4.0 7 693 A G - 0 0 42 2,-0.1 -2,-0.1 1,-0.1 -1,-0.0 -0.799 67.8-156.3-101.8 140.4 28.3 2.2 -2.1 8 694 A M + 0 0 157 -2,-0.4 2,-0.5 -4,-0.1 -1,-0.1 -0.215 58.4 114.0-104.2 41.3 25.3 0.3 -3.5 9 695 A S + 0 0 105 1,-0.1 3,-0.1 0, 0.0 -2,-0.1 -0.958 27.3 161.9-118.2 125.3 23.7 -0.5 -0.1 10 696 A R + 0 0 214 -2,-0.5 2,-0.3 1,-0.4 -1,-0.1 0.834 68.4 11.6-103.0 -55.8 20.4 0.9 0.9 11 697 A G - 0 0 42 1,-0.2 -1,-0.4 2,-0.1 4,-0.0 -0.959 53.7-146.9-130.5 148.1 19.2 -1.2 3.8 12 698 A R S S+ 0 0 253 -2,-0.3 -1,-0.2 -3,-0.1 -2,-0.1 0.984 85.7 2.2 -73.0 -62.1 20.8 -3.9 5.9 13 699 A G S S- 0 0 70 1,-0.1 2,-0.7 0, 0.0 -2,-0.1 0.403 117.6 -36.0 -96.9-127.9 17.8 -6.2 6.6 14 700 A R - 0 0 204 2,-0.0 4,-0.1 4,-0.0 -1,-0.1 -0.871 60.7-136.6-107.5 103.4 14.3 -5.9 5.3 15 701 A R > - 0 0 139 -2,-0.7 3,-1.4 1,-0.2 4,-0.2 -0.201 14.6-126.5 -55.6 144.3 13.1 -2.3 5.0 16 702 A D T 3 S+ 0 0 108 1,-0.3 3,-0.3 2,-0.1 -1,-0.2 0.611 109.2 66.3 -68.5 -10.8 9.6 -1.7 6.3 17 703 A N T 3 S+ 0 0 51 1,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.102 73.1 97.3 -96.9 21.1 8.9 -0.0 2.9 18 704 A E S < S+ 0 0 127 -3,-1.4 -1,-0.2 1,-0.2 -2,-0.1 0.955 82.6 45.7 -72.9 -53.0 9.3 -3.4 1.1 19 705 A L S > S+ 0 0 52 -3,-0.3 3,-2.0 -4,-0.2 2,-0.7 0.638 88.4 113.3 -65.5 -12.7 5.6 -4.2 0.9 20 706 A I T 3 S+ 0 0 42 1,-0.3 19,-0.2 19,-0.1 3,-0.1 -0.489 79.6 23.9 -65.8 108.2 5.2 -0.7 -0.3 21 707 A G T 3 S+ 0 0 40 17,-1.2 -1,-0.3 -2,-0.7 -2,-0.1 0.150 92.3 120.7 122.9 -17.7 4.1 -0.9 -3.9 22 708 A Q S < S- 0 0 94 -3,-2.0 16,-1.8 16,-0.2 2,-0.7 -0.406 70.9-105.1 -77.8 155.3 2.6 -4.4 -3.9 23 709 A T E -A 37 0A 59 44,-0.2 44,-2.9 14,-0.2 2,-0.4 -0.725 43.4-177.8 -85.6 112.3 -1.0 -5.1 -4.8 24 710 A V E -AB 36 66A 1 12,-2.8 12,-1.7 -2,-0.7 2,-0.5 -0.866 16.7-150.8-112.8 145.7 -3.0 -5.8 -1.7 25 711 A R E -AB 35 65A 81 40,-1.8 40,-1.7 -2,-0.4 10,-0.2 -0.942 19.8-129.4-119.7 112.2 -6.7 -6.8 -1.5 26 712 A I E + B 0 64A 2 8,-2.1 7,-3.1 -2,-0.5 8,-0.5 -0.276 26.0 176.9 -57.8 138.1 -8.6 -5.8 1.7 27 713 A S + 0 0 45 36,-1.8 2,-0.2 5,-0.2 -1,-0.1 0.640 63.4 42.0-114.4 -28.4 -10.6 -8.7 3.2 28 714 A Q S S+ 0 0 106 35,-0.7 3,-0.5 32,-0.1 5,-0.1 -0.588 89.3 39.5-114.0 177.1 -12.0 -7.0 6.3 29 715 A G S > S- 0 0 40 1,-0.2 3,-1.2 -2,-0.2 30,-0.0 -0.072 107.8 -52.8 75.4 179.6 -13.6 -3.6 7.1 30 716 A P T 3 S+ 0 0 119 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 0.525 134.7 63.5 -69.9 -4.7 -16.0 -1.7 4.9 31 717 A Y T > S+ 0 0 84 -3,-0.5 3,-1.5 3,-0.1 2,-0.3 -0.048 71.2 152.2-109.5 29.7 -13.5 -2.0 2.1 32 718 A K T < + 0 0 149 -3,-1.2 -5,-0.2 1,-0.3 3,-0.1 -0.446 69.2 19.2 -64.8 124.4 -13.7 -5.8 1.9 33 719 A G T 3 S+ 0 0 47 -7,-3.1 2,-0.4 1,-0.3 -1,-0.3 0.679 95.7 131.7 89.1 19.6 -13.0 -7.0 -1.6 34 720 A Y < - 0 0 102 -3,-1.5 -8,-2.1 -8,-0.5 -1,-0.3 -0.845 47.7-138.6-108.5 143.1 -11.2 -3.8 -2.6 35 721 A I E +A 25 0A 63 -2,-0.4 16,-1.4 -10,-0.2 17,-0.3 -0.664 30.8 151.6 -98.1 153.9 -7.8 -3.5 -4.3 36 722 A G E -AC 24 50A 1 -12,-1.7 -12,-2.8 14,-0.3 2,-0.5 -0.966 41.5-107.9-173.4 158.5 -5.0 -1.1 -3.5 37 723 A V E -AC 23 49A 24 12,-2.0 12,-2.6 -2,-0.3 2,-0.5 -0.859 37.2-117.2-101.7 125.3 -1.3 -0.4 -3.6 38 724 A V E + C 0 48A 0 -16,-1.8 -17,-1.2 -2,-0.5 10,-0.3 -0.426 37.5 171.1 -61.5 111.1 0.5 -0.3 -0.2 39 725 A K E + 0 0 93 8,-2.9 2,-0.3 -2,-0.5 9,-0.2 0.820 66.7 13.2 -90.5 -37.2 1.9 3.2 0.1 40 726 A D E - C 0 47A 75 7,-2.1 7,-1.1 -21,-0.1 2,-0.5 -0.991 65.5-140.3-142.1 148.8 3.1 3.0 3.7 41 727 A A E - C 0 46A 17 -2,-0.3 5,-0.2 5,-0.2 2,-0.2 -0.941 21.5-171.6-114.7 118.6 3.7 0.1 6.2 42 728 A T - 0 0 40 3,-2.6 19,-0.1 -2,-0.5 17,-0.0 -0.573 35.3-113.3-102.8 167.9 2.7 0.7 9.8 43 729 A E S S+ 0 0 167 1,-0.2 -1,-0.1 -2,-0.2 3,-0.0 0.905 117.8 8.4 -65.3 -42.7 3.3 -1.5 12.9 44 730 A S S S+ 0 0 79 17,-0.1 2,-0.3 16,-0.1 -1,-0.2 0.092 136.5 35.5-125.3 19.4 -0.4 -2.2 13.4 45 731 A T - 0 0 46 15,-0.2 -3,-2.6 16,-0.1 2,-0.3 -0.960 61.9-140.6-160.1 173.2 -1.6 -0.8 10.1 46 732 A A E -CD 41 59A 0 13,-1.0 13,-1.9 -2,-0.3 2,-1.0 -0.908 16.9-135.3-150.9 118.2 -0.8 -0.2 6.4 47 733 A R E +CD 40 58A 125 -7,-1.1 -8,-2.9 -2,-0.3 -7,-2.1 -0.608 34.4 179.0 -76.0 101.5 -1.6 2.9 4.3 48 734 A V E -CD 38 57A 1 9,-3.1 9,-2.9 -2,-1.0 2,-0.8 -0.853 24.6-139.4-108.2 141.6 -3.0 1.5 1.1 49 735 A E E -CD 37 56A 70 -12,-2.6 -12,-2.0 -2,-0.4 7,-0.3 -0.850 22.9-136.4-103.0 104.2 -4.1 3.6 -1.9 50 736 A L E -C 36 0A 2 5,-2.6 -14,-0.3 -2,-0.8 -13,-0.1 -0.031 2.6-140.3 -51.8 159.3 -7.3 2.1 -3.4 51 737 A H S S+ 0 0 108 -16,-1.4 -1,-0.1 3,-0.1 -15,-0.1 0.858 95.8 35.7 -91.1 -43.8 -7.6 1.9 -7.2 52 738 A S S S+ 0 0 104 -17,-0.3 -16,-0.1 1,-0.2 -18,-0.0 0.992 128.1 32.4 -73.0 -69.1 -11.2 2.9 -7.7 53 739 A T S S- 0 0 54 2,-0.1 -1,-0.2 1,-0.1 3,-0.1 0.576 95.8-146.2 -65.7 -7.5 -11.7 5.5 -4.9 54 740 A C + 0 0 93 1,-0.2 2,-0.3 -5,-0.1 -3,-0.1 0.867 51.2 136.6 40.3 47.3 -8.1 6.4 -5.5 55 741 A Q - 0 0 125 -7,-0.0 -5,-2.6 2,-0.0 2,-0.9 -0.928 59.2-123.3-125.0 148.9 -7.8 7.2 -1.8 56 742 A T E +D 49 0A 79 -2,-0.3 2,-0.3 -7,-0.3 -7,-0.3 -0.794 38.6 171.8 -94.3 104.9 -5.1 6.4 0.8 57 743 A I E -D 48 0A 27 -9,-2.9 -9,-3.1 -2,-0.9 2,-0.4 -0.876 28.8-127.1-115.1 146.9 -6.7 4.4 3.6 58 744 A S E +D 47 0A 41 -2,-0.3 2,-0.3 -11,-0.3 -11,-0.2 -0.776 33.2 169.3 -94.9 132.1 -5.0 2.7 6.6 59 745 A V E -D 46 0A 18 -13,-1.9 -13,-1.0 -2,-0.4 -17,-0.2 -0.995 44.8 -81.0-142.7 147.3 -5.8 -0.9 7.3 60 746 A D > - 0 0 46 -2,-0.3 4,-1.0 -15,-0.3 -15,-0.2 -0.168 38.3-129.1 -46.8 127.7 -4.4 -3.6 9.6 61 747 A R T 4 S+ 0 0 120 1,-0.2 3,-0.3 2,-0.2 -1,-0.2 0.844 111.9 45.0 -48.9 -37.0 -1.3 -5.2 7.9 62 748 A Q T 4 S+ 0 0 173 1,-0.2 -1,-0.2 3,-0.1 -2,-0.1 0.908 101.5 63.4 -74.7 -44.1 -2.9 -8.5 8.5 63 749 A R T 4 S+ 0 0 115 -36,-0.1 -36,-1.8 2,-0.1 -35,-0.7 0.666 91.7 87.7 -55.1 -14.4 -6.4 -7.5 7.4 64 750 A L E < S-B 26 0A 13 -4,-1.0 2,-0.9 -3,-0.3 -38,-0.2 -0.769 71.5-150.0 -92.8 129.2 -4.7 -7.0 4.0 65 751 A T E -B 25 0A 62 -40,-1.7 -40,-1.8 -2,-0.5 -3,-0.1 -0.803 21.8-128.5-101.6 95.7 -4.5 -10.0 1.7 66 752 A T E -B 24 0A 97 -2,-0.9 -42,-0.3 -42,-0.2 2,-0.1 -0.142 28.1-139.7 -43.5 118.8 -1.3 -9.7 -0.4 67 753 A V + 0 0 64 -44,-2.9 -44,-0.2 2,-0.0 2,-0.1 -0.344 27.1 170.4 -81.2 165.0 -2.5 -10.1 -4.0 68 754 A G - 0 0 54 -2,-0.1 -44,-0.0 -46,-0.1 -46,-0.0 -0.475 38.8-109.7-179.6 101.9 -0.6 -12.0 -6.7 69 755 A S + 0 0 129 -2,-0.1 2,-0.2 1,-0.1 -2,-0.0 0.019 48.2 176.3 -35.5 131.7 -1.7 -13.0 -10.2 70 756 A R 0 0 218 1,-0.1 -1,-0.1 0, 0.0 -2,-0.0 -0.725 360.0 360.0-133.3-177.3 -2.2 -16.8 -10.3 71 757 A R 0 0 258 -2,-0.2 -1,-0.1 0, 0.0 -2,-0.0 0.725 360.0 360.0-116.3 360.0 -3.3 -19.6 -12.6