==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-JAN-07 2E72 . COMPND 2 MOLECULE: POGO TRANSPOSABLE ELEMENT WITH ZNF DOMAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, . 49 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4724.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 34.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 22.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 363 A G 0 0 129 0, 0.0 3,-0.0 0, 0.0 4,-0.0 0.000 360.0 360.0 360.0 122.2 -6.4 14.2 9.6 2 364 A S + 0 0 115 1,-0.0 5,-0.2 2,-0.0 3,-0.0 0.756 360.0 80.0-112.9 -59.2 -3.6 16.7 10.2 3 365 A S S S+ 0 0 131 1,-0.2 2,-0.5 3,-0.1 3,-0.1 -0.285 94.2 27.4 -56.2 131.8 -2.3 16.3 13.8 4 366 A G S S+ 0 0 66 1,-0.1 2,-0.3 -3,-0.0 -1,-0.2 -0.815 88.9 85.3 122.5 -92.8 0.1 13.4 14.1 5 367 A S S S- 0 0 92 -2,-0.5 2,-1.6 1,-0.2 3,-0.1 -0.282 80.5-129.4 -51.6 105.7 2.0 12.6 10.8 6 368 A S S S- 0 0 122 -2,-0.3 -1,-0.2 1,-0.2 -3,-0.1 -0.402 84.6 -5.5 -62.7 88.4 4.9 15.0 11.0 7 369 A G S S- 0 0 54 -2,-1.6 -1,-0.2 -5,-0.2 -5,-0.0 0.783 89.8-105.0 89.0 101.1 4.5 16.5 7.6 8 370 A Q - 0 0 184 -3,-0.1 2,-0.3 1,-0.1 -6,-0.0 -0.231 36.8-119.5 -55.3 139.6 1.9 15.1 5.2 9 371 A D - 0 0 63 1,-0.1 3,-0.4 4,-0.0 2,-0.1 -0.654 24.7-124.1 -85.9 137.1 3.4 13.0 2.4 10 372 A G S S+ 0 0 73 -2,-0.3 3,-0.3 1,-0.2 -1,-0.1 -0.423 86.8 21.2 -79.0 154.7 2.8 14.1 -1.2 11 373 A G S S- 0 0 66 1,-0.2 -1,-0.2 -2,-0.1 -2,-0.0 0.944 89.7-130.3 55.1 52.9 1.3 11.9 -3.8 12 374 A R - 0 0 143 -3,-0.4 2,-0.7 1,-0.1 -1,-0.2 -0.053 26.4-160.2 -36.7 102.5 -0.4 9.6 -1.3 13 375 A K + 0 0 129 -3,-0.3 9,-0.6 9,-0.2 2,-0.4 -0.841 21.2 160.6 -98.4 111.9 0.7 6.2 -2.6 14 376 A I - 0 0 73 -2,-0.7 7,-0.1 7,-0.1 -2,-0.0 -0.993 44.3-107.7-134.3 138.8 -1.5 3.4 -1.4 15 377 A C > - 0 0 1 5,-0.4 4,-0.7 -2,-0.4 -2,-0.0 -0.465 19.4-148.4 -66.3 120.8 -2.1 -0.1 -2.7 16 378 A P T 4 S+ 0 0 88 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.427 94.0 47.1 -69.7 3.1 -5.5 -0.4 -4.3 17 379 A R T 4 S+ 0 0 131 19,-0.0 15,-0.0 3,-0.0 -2,-0.0 0.788 130.8 7.0-106.1 -75.1 -5.5 -4.0 -3.2 18 380 A C T 4 S- 0 0 59 2,-0.0 -4,-0.0 18,-0.0 0, 0.0 0.789 88.7-138.3 -81.8 -30.1 -4.5 -4.5 0.4 19 381 A N < + 0 0 104 -4,-0.7 2,-0.1 1,-0.1 -5,-0.0 0.966 40.2 165.6 70.0 55.0 -4.4 -0.7 1.1 20 382 A A - 0 0 33 1,-0.0 2,-0.5 0, 0.0 -5,-0.4 -0.311 38.1-104.2 -93.4 179.8 -1.2 -0.7 3.1 21 383 A Q + 0 0 154 -7,-0.1 2,-0.3 -2,-0.1 -7,-0.1 -0.935 40.5 170.5-112.9 123.8 1.1 2.2 4.1 22 384 A F - 0 0 44 -9,-0.6 -9,-0.2 -2,-0.5 3,-0.1 -0.934 23.0-172.7-130.8 153.9 4.4 2.8 2.4 23 385 A R S S+ 0 0 211 -2,-0.3 2,-0.2 1,-0.2 -1,-0.1 0.778 72.5 53.0-109.2 -50.2 7.0 5.6 2.4 24 386 A V S > S- 0 0 90 1,-0.1 4,-1.1 4,-0.0 -1,-0.2 -0.631 75.4-131.8 -91.6 149.4 9.5 4.8 -0.3 25 387 A T H > S+ 0 0 92 -2,-0.2 4,-1.9 1,-0.2 -1,-0.1 0.658 103.4 67.2 -71.3 -15.3 8.5 4.0 -3.9 26 388 A E H > S+ 0 0 155 2,-0.2 4,-2.1 1,-0.2 5,-0.3 0.969 95.6 50.5 -69.0 -55.7 10.7 0.9 -3.7 27 389 A A H > S+ 0 0 40 1,-0.2 4,-2.6 2,-0.2 5,-0.3 0.918 113.9 45.9 -47.9 -51.6 8.6 -1.0 -1.1 28 390 A L H X S+ 0 0 16 -4,-1.1 4,-3.1 1,-0.2 5,-0.5 0.933 105.9 60.5 -59.0 -48.5 5.5 -0.5 -3.2 29 391 A R H X S+ 0 0 143 -4,-1.9 4,-2.0 2,-0.2 -1,-0.2 0.923 119.4 26.5 -44.4 -57.0 7.2 -1.4 -6.5 30 392 A G H X S+ 0 0 33 -4,-2.1 4,-2.0 2,-0.2 5,-0.3 0.987 119.3 54.1 -72.7 -62.2 8.0 -4.9 -5.1 31 393 A H H X S+ 0 0 60 -4,-2.6 4,-3.2 -5,-0.3 5,-0.2 0.856 115.6 43.9 -38.9 -46.3 5.2 -5.4 -2.6 32 394 A M H X S+ 0 0 9 -4,-3.1 4,-1.6 -5,-0.3 -1,-0.2 0.974 103.0 62.4 -66.1 -56.6 2.8 -4.6 -5.4 33 395 A C H < S+ 0 0 46 -4,-2.0 -1,-0.2 -5,-0.5 -2,-0.2 0.830 121.8 25.9 -36.7 -43.1 4.5 -6.7 -8.1 34 396 A Y H < S+ 0 0 204 -4,-2.0 -2,-0.2 2,-0.2 -1,-0.2 0.932 126.7 44.3 -87.8 -59.7 3.7 -9.7 -5.9 35 397 A C H < S+ 0 0 37 -4,-3.2 -3,-0.2 -5,-0.3 -2,-0.2 0.960 138.0 5.7 -49.2 -63.7 0.7 -8.6 -3.9 36 398 A C X + 0 0 10 -4,-1.6 4,-0.9 -5,-0.2 3,-0.4 -0.760 64.2 173.2-129.2 86.1 -1.1 -7.1 -6.9 37 399 A P T 4 + 0 0 67 0, 0.0 -4,-0.1 0, 0.0 -1,-0.1 0.467 68.1 83.8 -69.8 -0.2 0.7 -7.7 -10.2 38 400 A E T 4 S+ 0 0 139 -6,-0.2 -5,-0.1 1,-0.1 -2,-0.0 0.995 95.2 33.3 -66.3 -65.5 -2.3 -6.2 -11.9 39 401 A M T 4 S+ 0 0 107 -3,-0.4 -1,-0.1 -7,-0.1 -6,-0.1 0.966 94.3 96.3 -55.5 -58.1 -1.4 -2.5 -11.7 40 402 A V < + 0 0 41 -4,-0.9 2,-0.4 -11,-0.1 -11,-0.0 -0.089 55.2 159.0 -39.0 101.1 2.4 -3.1 -11.9 41 403 A E + 0 0 160 2,-0.0 2,-0.3 0, 0.0 -1,-0.0 -0.985 4.6 147.1-138.4 125.6 2.8 -2.5 -15.7 42 404 A Y - 0 0 192 -2,-0.4 2,-0.7 0, 0.0 -2,-0.0 -0.982 50.6-102.9-157.2 144.0 6.0 -1.5 -17.5 43 405 A Q + 0 0 170 -2,-0.3 4,-0.1 1,-0.2 -2,-0.0 -0.568 54.8 144.9 -71.9 109.0 7.6 -2.1 -20.9 44 406 A S + 0 0 118 -2,-0.7 -1,-0.2 2,-0.1 3,-0.1 0.776 41.3 143.1-110.1 -52.7 10.3 -4.8 -20.4 45 407 A G S S- 0 0 44 1,-0.4 2,-0.2 0, 0.0 -1,-0.1 -0.513 79.4-133.5 115.0 175.4 10.3 -7.0 -23.5 46 408 A P - 0 0 137 0, 0.0 -1,-0.4 0, 0.0 -2,-0.1 0.594 60.6-144.3 -69.8 174.2 10.8 -8.6 -25.8 47 409 A S - 0 0 98 -2,-0.2 2,-0.2 -3,-0.1 -4,-0.0 -0.446 28.5 -74.2 -99.7 175.2 8.6 -6.5 -28.1 48 410 A S 0 0 122 -2,-0.1 -1,-0.1 1,-0.1 0, 0.0 -0.474 360.0 360.0 -71.8 137.0 6.4 -7.6 -31.1 49 411 A G 0 0 129 -2,-0.2 -1,-0.1 -3,-0.1 0, 0.0 -0.671 360.0 360.0-105.0 360.0 8.3 -8.6 -34.2