==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-MAR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 16-MAR-12 4E71 . COMPND 2 MOLECULE: PLEXIN-B2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.GUAN,H.WANG,W.TEMPEL,Y.TONG,C.H.ARROWSMITH,A.M.EDWARDS,C.B . 89 4 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5580.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 58.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 20.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1459 A E 0 0 143 0, 0.0 2,-0.3 0, 0.0 24,-0.0 0.000 360.0 360.0 360.0 141.6 -10.5 -1.5 9.3 2 1460 A Y + 0 0 72 23,-0.1 22,-0.0 24,-0.0 0, 0.0 -0.790 360.0 164.0 -98.8 141.8 -10.0 2.3 9.7 3 1461 A A - 0 0 49 -2,-0.3 22,-2.1 2,-0.0 23,-0.2 -0.985 34.8-104.9-156.1 150.3 -7.3 4.1 7.7 4 1462 A P E +A 24 0A 99 0, 0.0 2,-0.3 0, 0.0 20,-0.2 -0.324 35.3 173.5 -75.7 161.5 -6.2 7.7 6.6 5 1463 A L E -A 23 0A 11 18,-2.2 18,-3.0 77,-0.1 2,-0.4 -0.957 25.3-127.1-157.8 157.8 -6.7 9.1 3.1 6 1464 A T E -A 22 0A 61 -2,-0.3 78,-3.1 16,-0.2 2,-0.3 -0.945 18.7-164.5-114.1 134.9 -6.3 12.5 1.4 7 1465 A V E -A 21 0A 2 14,-2.3 14,-2.5 -2,-0.4 2,-0.6 -0.803 19.5-128.8-110.4 155.3 -9.0 14.2 -0.6 8 1466 A S E -Ab 20 86A 33 77,-2.7 79,-3.0 -2,-0.3 2,-0.5 -0.945 25.5-151.8-109.3 115.0 -8.4 17.1 -3.0 9 1467 A V E -Ab 19 87A 0 10,-3.4 10,-2.7 -2,-0.6 2,-0.5 -0.806 9.1-164.4 -99.1 123.7 -10.7 20.0 -2.3 10 1468 A I E - b 0 88A 69 77,-2.8 79,-3.2 -2,-0.5 2,-0.8 -0.869 16.7-141.4-101.9 122.8 -11.9 22.5 -4.9 11 1469 A V E > - b 0 89A 17 -2,-0.5 3,-1.5 77,-0.2 5,-0.5 -0.819 35.9-114.2 -86.7 107.7 -13.4 25.7 -3.5 12 1470 A Q T 3 S- 0 0 80 77,-2.9 79,-0.2 -2,-0.8 -1,-0.0 -0.185 83.0 -9.3 -53.8 132.5 -16.3 26.3 -6.0 13 1471 A D T 3 S+ 0 0 149 1,-0.1 -1,-0.2 3,-0.1 77,-0.1 0.435 103.4 105.5 58.5 11.4 -16.2 29.4 -8.3 14 1472 A E S < S- 0 0 137 -3,-1.5 -2,-0.1 2,-0.1 -1,-0.1 0.605 78.7-136.0 -90.8 -10.8 -13.1 30.9 -6.4 15 1473 A G + 0 0 80 -4,-0.4 2,-0.2 1,-0.2 -3,-0.1 0.867 57.4 133.4 58.3 40.3 -10.7 30.0 -9.2 16 1474 A V - 0 0 82 -5,-0.5 -1,-0.2 1,-0.1 -5,-0.2 -0.741 61.4 -85.0-116.9 164.6 -8.0 28.7 -6.8 17 1475 A D - 0 0 145 -2,-0.2 -6,-0.1 1,-0.1 -8,-0.1 -0.431 52.0 -93.1 -68.9 148.1 -5.9 25.5 -6.7 18 1476 A A - 0 0 45 -2,-0.1 -8,-0.2 -8,-0.1 -1,-0.1 -0.266 40.1-139.2 -57.6 138.6 -7.2 22.3 -5.2 19 1477 A I E -A 9 0A 35 -10,-2.7 -10,-3.4 -3,-0.1 2,-0.3 -0.929 9.4-131.9-107.3 123.0 -6.3 21.9 -1.5 20 1478 A P E -A 8 0A 86 0, 0.0 2,-0.4 0, 0.0 -12,-0.2 -0.601 24.7-169.7 -75.3 135.8 -5.2 18.5 -0.1 21 1479 A V E -A 7 0A 1 -14,-2.5 -14,-2.3 -2,-0.3 2,-0.6 -0.990 18.1-137.7-131.3 124.4 -7.0 17.5 3.1 22 1480 A K E +A 6 0A 68 -2,-0.4 -16,-0.2 -16,-0.2 2,-0.2 -0.718 38.4 159.3 -82.5 119.9 -6.0 14.5 5.3 23 1481 A V E -A 5 0A 2 -18,-3.0 -18,-2.2 -2,-0.6 2,-0.3 -0.710 35.3-116.2-129.4 176.7 -9.2 12.7 6.5 24 1482 A L E > -A 4 0A 63 -20,-0.2 3,-1.4 -2,-0.2 52,-0.4 -0.908 18.6-127.8-118.4 150.7 -10.1 9.2 7.8 25 1483 A N T 3 S+ 0 0 22 -22,-2.1 52,-1.7 -2,-0.3 51,-0.3 0.794 113.3 52.6 -67.0 -25.4 -12.4 6.6 6.1 26 1484 A C T 3 S+ 0 0 59 -23,-0.2 2,-0.3 49,-0.1 -1,-0.3 0.336 83.1 115.6 -91.7 5.4 -14.4 6.4 9.4 27 1485 A D < - 0 0 5 -3,-1.4 49,-1.1 4,-0.1 50,-0.2 -0.617 66.7-130.9 -73.1 131.9 -14.9 10.2 9.6 28 1486 A T B > -E 75 0B 26 -2,-0.3 4,-2.3 47,-0.2 47,-0.3 -0.329 31.1 -99.4 -70.9 169.5 -18.5 11.1 9.2 29 1487 A I H > S+ 0 0 0 45,-1.5 4,-3.1 1,-0.2 5,-0.2 0.905 126.3 53.8 -60.5 -40.9 -19.3 13.8 6.6 30 1488 A S H > S+ 0 0 41 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.869 109.7 48.3 -60.3 -36.6 -19.5 16.4 9.4 31 1489 A Q H > S+ 0 0 82 -3,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.856 111.4 50.1 -68.6 -38.4 -16.0 15.4 10.6 32 1490 A V H >X S+ 0 0 0 -4,-2.3 4,-2.2 2,-0.2 3,-0.5 0.980 110.3 50.2 -63.1 -51.5 -14.7 15.5 7.0 33 1491 A K H 3X S+ 0 0 21 -4,-3.1 4,-2.9 1,-0.3 -2,-0.2 0.846 108.5 52.4 -55.0 -41.9 -16.3 19.1 6.6 34 1492 A E H 3X S+ 0 0 102 -4,-2.0 4,-2.3 2,-0.2 -1,-0.3 0.868 111.1 46.8 -61.6 -41.7 -14.6 20.3 9.9 35 1493 A K H < S+ 0 0 62 -4,-1.5 3,-1.0 -3,-0.2 -2,-0.2 0.959 119.2 42.1 -73.7 -57.6 -7.4 23.3 6.3 40 1498 A V H 3< S+ 0 0 34 -4,-3.2 -2,-0.2 1,-0.2 -3,-0.2 0.863 124.0 36.2 -60.9 -43.2 -9.0 25.6 3.6 41 1499 A Y T 3< 0 0 134 -4,-2.7 -1,-0.2 -5,-0.3 -2,-0.2 0.145 360.0 360.0-105.2 24.4 -9.5 28.6 6.0 42 1500 A R < 0 0 236 -3,-1.0 -1,-0.2 -4,-0.1 -2,-0.1 0.745 360.0 360.0 -35.9 360.0 -6.3 28.3 8.2 43 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 44 1510 A P 0 0 60 0, 0.0 -11,-0.1 0, 0.0 -10,-0.0 0.000 360.0 360.0 360.0 -34.0 -20.5 22.9 8.3 45 1511 A D + 0 0 167 1,-0.2 -15,-0.0 3,-0.1 0, 0.0 0.757 360.0 46.3 -80.0 -32.2 -24.2 23.9 8.1 46 1512 A S S S+ 0 0 63 45,-0.0 46,-2.6 2,-0.0 2,-0.3 0.522 107.3 74.2 -84.0 -13.1 -23.3 26.9 5.8 47 1513 A V E -C 91 0A 18 44,-0.2 2,-0.4 42,-0.0 44,-0.2 -0.829 64.1-153.3-110.9 149.4 -21.0 24.7 3.6 48 1514 A V E -C 90 0A 41 42,-3.5 42,-2.0 -2,-0.3 2,-0.4 -0.918 5.5-156.7-117.0 140.7 -21.8 22.1 1.0 49 1515 A L E +C 89 0A 0 10,-0.5 10,-3.0 -2,-0.4 2,-0.3 -0.989 15.4 179.6-122.9 125.2 -19.6 19.1 0.0 50 1516 A E E -CD 88 58A 40 38,-2.7 38,-3.4 -2,-0.4 2,-0.3 -0.904 10.7-168.5-125.8 154.4 -19.9 17.5 -3.4 51 1517 A W E CD 87 57A 56 6,-2.1 6,-3.3 -2,-0.3 36,-0.2 -0.962 360.0 360.0-139.5 147.3 -18.1 14.6 -5.2 52 1518 A R 0 0 87 34,-0.7 4,-0.2 -2,-0.3 34,-0.1 -0.647 360.0 360.0-123.8 360.0 -18.2 13.5 -8.9 53 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 54 1521 A S 0 0 150 0, 0.0 2,-0.5 0, 0.0 -2,-0.0 0.000 360.0 360.0 360.0 -38.7 -20.5 11.3 -14.2 55 1522 A T - 0 0 82 2,-0.0 2,-0.2 0, 0.0 -4,-0.1 -0.880 360.0-127.9-102.9 127.5 -23.2 12.5 -11.8 56 1523 A A - 0 0 61 -2,-0.5 2,-0.4 -4,-0.2 -4,-0.2 -0.517 25.3-159.9 -72.7 136.1 -22.3 14.9 -9.0 57 1524 A Q E -D 51 0A 66 -6,-3.3 -6,-2.1 -2,-0.2 2,-0.3 -0.985 14.6-132.7-125.3 129.8 -23.4 13.8 -5.5 58 1525 A I E -D 50 0A 96 -2,-0.4 2,-0.5 -8,-0.2 -8,-0.3 -0.630 24.6-139.8 -73.5 130.2 -23.8 15.9 -2.3 59 1526 A L + 0 0 0 -10,-3.0 -10,-0.5 -2,-0.3 2,-0.3 -0.823 33.0 160.0 -96.0 129.4 -22.1 14.2 0.7 60 1527 A S - 0 0 40 -2,-0.5 3,-0.2 1,-0.1 14,-0.2 -0.985 50.6-118.0-147.9 154.3 -24.0 14.4 4.0 61 1528 A D S S+ 0 0 39 -2,-0.3 13,-3.2 1,-0.2 2,-0.4 0.943 107.6 20.0 -54.4 -52.1 -24.2 12.6 7.3 62 1529 A L S S+ 0 0 109 11,-0.2 -1,-0.2 -3,-0.1 2,-0.2 -0.992 81.4 135.8-127.7 123.4 -27.8 11.5 6.7 63 1530 A D > - 0 0 49 -2,-0.4 3,-1.1 -3,-0.2 -4,-0.0 -0.801 68.9 -78.3-146.5-173.5 -29.4 11.4 3.3 64 1531 A L T 3 S+ 0 0 187 1,-0.2 -2,-0.0 -2,-0.2 0, 0.0 0.640 126.8 56.6 -70.0 -16.2 -31.6 9.1 1.1 65 1532 A T T 3 S+ 0 0 62 2,-0.1 -1,-0.2 3,-0.0 3,-0.1 0.584 81.1 125.5 -87.8 -15.7 -28.5 6.8 0.4 66 1533 A S S < S- 0 0 11 -3,-1.1 7,-0.1 1,-0.1 2,-0.1 -0.069 76.7 -88.6 -50.0 142.9 -27.8 6.2 4.2 67 1534 A Q 0 0 41 5,-0.5 5,-2.8 1,-0.1 -1,-0.1 -0.364 360.0 360.0 -58.5 122.2 -27.6 2.6 5.4 68 1535 A R 0 0 128 3,-0.2 -1,-0.1 -3,-0.1 3,-0.1 -0.054 360.0 360.0-118.6 360.0 -31.2 1.4 6.4 69 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 70 1539 A W 0 0 141 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 130.2 -33.4 3.8 11.3 71 1540 A K - 0 0 63 -3,-0.1 2,-0.2 -9,-0.0 -3,-0.2 -0.978 360.0-136.6-121.0 125.0 -30.7 5.4 9.1 72 1541 A R - 0 0 180 -5,-2.8 -5,-0.5 -2,-0.4 2,-0.0 -0.575 31.3 -99.2 -82.2 141.0 -26.9 5.0 9.9 73 1542 A V - 0 0 77 -2,-0.2 2,-0.3 -7,-0.1 -11,-0.2 -0.306 39.7-118.8 -63.7 134.2 -24.5 8.0 9.6 74 1543 A N - 0 0 1 -13,-3.2 -45,-1.5 -14,-0.2 2,-0.2 -0.573 30.8-178.8 -77.1 138.0 -22.5 8.3 6.4 75 1544 A T B > -E 28 0B 18 -2,-0.3 4,-1.3 -47,-0.3 3,-0.3 -0.712 47.7 -99.0-120.7 175.1 -18.7 8.2 6.3 76 1545 A L H >>S+ 0 0 0 -49,-1.1 5,-2.4 -52,-0.4 4,-1.2 0.883 127.5 59.5 -63.3 -33.1 -16.4 8.5 3.3 77 1546 A M H 45S+ 0 0 110 -52,-1.7 -1,-0.2 3,-0.2 3,-0.2 0.856 99.8 56.9 -58.1 -40.8 -16.3 4.6 3.4 78 1547 A H H 45S+ 0 0 66 -3,-0.3 -1,-0.2 -53,-0.3 -2,-0.2 0.914 112.2 39.1 -58.0 -49.8 -20.1 4.6 3.0 79 1548 A Y H <5S- 0 0 16 -4,-1.3 -1,-0.2 -3,-0.1 -2,-0.2 0.642 113.4-120.2 -73.9 -17.7 -19.9 6.6 -0.4 80 1549 A N T <5 + 0 0 97 -4,-1.2 2,-0.5 1,-0.2 -3,-0.2 0.839 47.8 172.0 72.5 42.4 -16.8 4.6 -1.4 81 1550 A V < - 0 0 10 -5,-2.4 -1,-0.2 -6,-0.1 2,-0.2 -0.723 16.7-160.1 -79.6 117.1 -14.6 7.8 -1.6 82 1551 A R > - 0 0 66 -2,-0.5 3,-2.0 1,-0.1 -77,-0.1 -0.556 30.5 -67.1-100.5 168.0 -11.1 6.5 -2.1 83 1552 A D T 3 S+ 0 0 115 1,-0.2 -76,-0.2 -2,-0.2 -1,-0.1 -0.275 121.9 22.7 -52.3 128.4 -7.6 8.1 -1.5 84 1553 A G T 3 S+ 0 0 50 -78,-3.1 -1,-0.2 1,-0.3 -77,-0.1 0.177 85.6 152.4 96.6 -13.8 -7.0 10.9 -4.0 85 1554 A A < - 0 0 19 -3,-2.0 -77,-2.7 -79,-0.2 2,-0.5 -0.102 44.5-122.8 -51.9 142.5 -10.7 11.6 -4.7 86 1555 A T E -b 8 0A 68 -79,-0.2 -34,-0.7 -34,-0.1 2,-0.3 -0.794 29.0-171.3 -92.5 126.6 -11.7 15.2 -5.8 87 1556 A L E -bC 9 51A 0 -79,-3.0 -77,-2.8 -2,-0.5 2,-0.5 -0.859 14.0-141.0-117.4 151.8 -14.3 17.0 -3.6 88 1557 A I E -bC 10 50A 41 -38,-3.4 -38,-2.7 -2,-0.3 2,-0.4 -0.970 12.4-162.7-118.2 124.2 -16.1 20.3 -4.2 89 1558 A L E +bC 11 49A 1 -79,-3.2 -77,-2.9 -2,-0.5 2,-0.3 -0.925 15.6 166.5-109.2 128.8 -16.7 22.8 -1.4 90 1559 A S E - C 0 48A 23 -42,-2.0 -42,-3.5 -2,-0.4 2,-0.3 -0.940 23.5-132.5-138.2 153.7 -19.3 25.6 -1.8 91 1560 A K E C 0 47A 71 -2,-0.3 -44,-0.2 -44,-0.2 -45,-0.0 -0.747 360.0 360.0-110.5 162.8 -20.9 27.9 0.8 92 1561 A V 0 0 119 -46,-2.6 -2,-0.1 -2,-0.3 0, 0.0 -0.556 360.0 360.0 68.3 360.0 -24.5 29.1 1.5