==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-MAR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 16-MAR-12 4E74 . COMPND 2 MOLECULE: PLEXIN-A4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.GUAN,H.WANG,W.TEMPEL,A.DONG,Y.TONG,C.H.ARROWSMITH,A.M.EDWA . 101 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6433.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 60.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 20.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1496 A D 0 0 115 0, 0.0 2,-0.3 0, 0.0 84,-0.1 0.000 360.0 360.0 360.0 149.0 34.4 19.9 58.7 2 1497 A Y + 0 0 179 21,-0.1 2,-0.3 2,-0.0 20,-0.0 -0.789 360.0 137.3-145.2 88.0 36.3 18.8 55.6 3 1498 A K - 0 0 134 -2,-0.3 20,-3.2 2,-0.0 21,-0.3 -0.973 46.4-117.7-134.5 153.0 36.6 15.1 55.4 4 1499 A T E +A 22 0A 89 -2,-0.3 2,-0.3 18,-0.2 18,-0.2 -0.564 28.9 175.6 -87.9 150.5 36.3 12.4 52.6 5 1500 A L E -A 21 0A 14 16,-2.4 16,-2.6 -2,-0.2 2,-0.4 -0.960 25.1-121.0-142.6 164.1 33.7 9.7 52.5 6 1501 A V E -A 20 0A 30 -2,-0.3 86,-3.2 14,-0.2 87,-0.4 -0.927 17.5-165.9-104.0 135.2 32.8 6.9 50.0 7 1502 A L E -A 19 0A 0 12,-2.4 12,-2.8 -2,-0.4 2,-0.8 -0.938 19.2-136.9-113.0 139.9 29.4 6.5 48.3 8 1503 A S E -Ab 18 94A 24 85,-2.7 87,-2.3 -2,-0.4 2,-0.5 -0.865 27.6-154.2 -95.6 106.0 28.6 3.2 46.4 9 1504 A C E -Ab 17 95A 2 8,-2.8 8,-2.4 -2,-0.8 87,-0.2 -0.728 11.1-126.0 -95.9 125.8 26.8 4.5 43.2 10 1505 A V - 0 0 41 85,-2.7 87,-0.3 -2,-0.5 6,-0.1 -0.405 35.9-105.8 -65.7 136.4 24.3 2.3 41.3 11 1506 A S 0 0 42 3,-0.4 -1,-0.1 1,-0.1 5,-0.1 -0.389 360.0 360.0 -66.0 139.3 25.3 1.9 37.7 12 1507 A P 0 0 115 0, 0.0 -1,-0.1 0, 0.0 27,-0.1 0.962 360.0 360.0 -82.4 360.0 23.1 3.9 35.2 13 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 14 1512 A S 0 0 126 0, 0.0 -3,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 156.3 26.5 -4.1 36.7 15 1513 A P - 0 0 106 0, 0.0 2,-0.1 0, 0.0 -6,-0.0 -0.251 360.0-102.4 -73.2 154.9 28.5 -3.4 39.9 16 1514 A E - 0 0 92 -6,-0.1 -6,-0.2 -5,-0.1 -8,-0.1 -0.400 33.3-131.9 -65.4 150.2 28.2 -0.4 42.1 17 1515 A V E -A 9 0A 47 -8,-2.4 -8,-2.8 -2,-0.1 2,-0.6 -0.946 11.1-135.9-109.8 120.0 31.0 2.2 41.7 18 1516 A P E -A 8 0A 100 0, 0.0 2,-0.4 0, 0.0 -10,-0.2 -0.677 27.6-172.1 -80.5 121.7 32.7 3.6 44.9 19 1517 A V E -A 7 0A 13 -12,-2.8 -12,-2.4 -2,-0.6 2,-0.4 -0.917 17.7-134.8-117.8 127.9 33.1 7.3 44.6 20 1518 A K E +A 6 0A 136 -2,-0.4 2,-0.3 -14,-0.2 -14,-0.2 -0.698 34.4 157.5 -77.1 129.4 35.0 9.7 46.9 21 1519 A I E -A 5 0A 3 -16,-2.6 -16,-2.4 -2,-0.4 2,-0.4 -0.866 39.5-101.8-138.4 175.6 33.4 13.0 47.9 22 1520 A L E > -A 4 0A 21 -2,-0.3 3,-1.6 -18,-0.2 62,-0.4 -0.822 19.1-131.7 -99.7 147.3 33.7 15.5 50.7 23 1521 A N T 3 S+ 0 0 27 -20,-3.2 62,-1.8 -2,-0.4 63,-0.3 0.644 109.6 52.1 -70.0 -10.8 31.3 15.7 53.6 24 1522 A C T 3 S+ 0 0 47 -21,-0.3 -1,-0.3 59,-0.1 2,-0.2 0.282 80.5 115.2-101.4 -0.1 31.0 19.4 53.0 25 1523 A D S < S- 0 0 12 -3,-1.6 59,-0.7 1,-0.1 60,-0.2 -0.509 72.4-116.5 -67.0 139.8 30.2 19.3 49.3 26 1524 A T B > -E 83 0B 29 57,-0.2 4,-2.5 -2,-0.2 57,-0.2 -0.358 31.6-104.9 -64.0 162.9 26.8 20.6 48.5 27 1525 A I H > S+ 0 0 0 55,-1.7 4,-2.4 2,-0.2 5,-0.1 0.895 124.8 55.0 -61.8 -34.0 24.5 18.0 47.1 28 1526 A T H > S+ 0 0 47 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.943 108.7 48.6 -60.5 -43.6 24.9 19.6 43.6 29 1527 A Q H > S+ 0 0 95 1,-0.2 4,-1.9 2,-0.2 -2,-0.2 0.872 110.0 51.5 -66.0 -37.2 28.7 19.2 44.0 30 1528 A V H X S+ 0 0 0 -4,-2.5 4,-2.3 2,-0.2 -1,-0.2 0.916 109.2 50.1 -60.1 -51.9 28.2 15.5 45.1 31 1529 A K H X S+ 0 0 7 -4,-2.4 4,-2.5 -5,-0.2 -2,-0.2 0.911 107.3 54.9 -54.8 -41.6 26.1 14.9 42.0 32 1530 A E H X S+ 0 0 55 -4,-2.2 4,-2.2 1,-0.2 -2,-0.2 0.927 109.7 46.7 -58.3 -44.9 28.8 16.4 39.8 33 1531 A K H X S+ 0 0 68 -4,-1.9 4,-1.1 1,-0.2 -1,-0.2 0.877 111.4 50.9 -67.6 -35.1 31.5 14.1 41.2 34 1532 A I H >X S+ 0 0 2 -4,-2.3 4,-3.0 2,-0.2 3,-0.5 0.936 109.4 50.0 -67.1 -43.3 29.2 11.0 40.8 35 1533 A L H 3X S+ 0 0 9 -4,-2.5 4,-2.2 1,-0.2 -2,-0.2 0.901 106.1 57.4 -61.4 -40.9 28.6 11.9 37.2 36 1534 A D H 3< S+ 0 0 94 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.793 114.8 38.4 -56.5 -36.3 32.4 12.3 36.6 37 1535 A A H X< S+ 0 0 31 -4,-1.1 3,-1.5 -3,-0.5 -2,-0.2 0.943 118.9 42.4 -79.0 -58.8 32.8 8.7 37.8 38 1536 A I H 3< S+ 0 0 29 -4,-3.0 -2,-0.2 1,-0.3 -3,-0.2 0.699 125.9 33.7 -71.4 -21.6 29.8 6.9 36.3 39 1537 A F T >< S+ 0 0 42 -4,-2.2 3,-2.3 -5,-0.3 -1,-0.3 -0.071 77.0 136.4-118.1 30.3 30.0 8.6 32.9 40 1538 A K T < S+ 0 0 136 -3,-1.5 -1,-0.1 1,-0.3 -2,-0.1 0.806 73.4 45.2 -49.6 -37.3 33.9 8.9 32.8 41 1539 A N T 3 S+ 0 0 130 -4,-0.2 -1,-0.3 -3,-0.1 -2,-0.1 0.339 94.2 91.9 -93.6 8.7 34.1 7.8 29.2 42 1540 A V S < S- 0 0 48 -3,-2.3 5,-0.1 1,-0.0 -3,-0.1 -0.877 85.3-109.9-101.5 131.0 31.3 10.0 27.8 43 1541 A P > - 0 0 81 0, 0.0 3,-2.2 0, 0.0 4,-0.3 -0.252 28.0-114.5 -57.1 145.5 32.2 13.5 26.5 44 1542 A C G > S+ 0 0 102 1,-0.3 3,-1.5 2,-0.2 -2,-0.0 0.851 114.0 63.7 -47.2 -40.8 31.0 16.3 28.8 45 1543 A S G 3 S+ 0 0 95 1,-0.3 -1,-0.3 0, 0.0 -3,-0.0 0.701 107.6 40.2 -56.3 -26.7 28.7 17.5 26.0 46 1544 A H G < S+ 0 0 152 -3,-2.2 -1,-0.3 2,-0.1 -2,-0.2 0.229 92.2 104.1-115.4 12.2 26.6 14.2 26.1 47 1545 A R S < S- 0 0 48 -3,-1.5 -12,-0.0 -4,-0.3 -8,-0.0 -0.673 79.4-103.3 -87.9 149.8 26.4 13.7 29.9 48 1546 A P - 0 0 49 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.395 42.9-115.6 -61.9 149.3 23.3 14.3 31.9 49 1547 A K > - 0 0 85 1,-0.1 3,-1.8 -3,-0.0 4,-0.2 -0.696 12.3-123.9 -90.4 143.8 23.7 17.6 33.9 50 1548 A A G > S+ 0 0 14 -2,-0.3 3,-1.4 1,-0.3 -1,-0.1 0.831 111.5 57.2 -49.8 -40.8 23.8 17.6 37.7 51 1549 A A G 3 S+ 0 0 64 1,-0.3 -1,-0.3 3,-0.0 -23,-0.0 0.645 103.5 53.3 -71.4 -14.3 20.8 20.1 37.8 52 1550 A D G < S+ 0 0 102 -3,-1.8 48,-1.7 2,-0.0 2,-0.3 0.334 106.6 61.9 -98.5 5.2 18.7 17.7 35.8 53 1551 A M E < -C 99 0A 14 -3,-1.4 2,-0.3 -4,-0.2 46,-0.2 -0.872 68.3-143.6-127.8 157.2 19.2 14.7 38.2 54 1552 A D E -C 98 0A 32 44,-2.3 44,-2.5 -2,-0.3 2,-0.5 -0.950 20.2-120.7-121.4 147.5 18.5 14.0 41.9 55 1553 A L E -CD 97 67A 0 12,-1.0 12,-2.7 -2,-0.3 2,-0.6 -0.750 26.0-161.2 -86.1 123.8 20.5 12.1 44.4 56 1554 A E E -CD 96 66A 27 40,-3.1 40,-1.8 -2,-0.5 2,-0.7 -0.920 7.0-150.4-110.5 117.4 18.7 9.1 45.9 57 1555 A W E -CD 95 65A 28 8,-3.4 8,-2.4 -2,-0.6 2,-1.1 -0.783 6.2-158.0 -85.4 112.3 20.0 7.6 49.2 58 1556 A R E -CD 94 64A 69 36,-2.5 36,-0.6 -2,-0.7 6,-0.2 -0.783 20.1-155.1 -92.3 87.8 19.2 3.9 49.2 59 1557 A Q > - 0 0 54 4,-2.0 3,-2.1 -2,-1.1 36,-0.0 -0.252 27.1-118.2 -63.8 154.9 19.3 3.2 53.0 60 1558 A G T 3 S+ 0 0 93 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.796 114.9 68.4 -60.8 -27.1 20.0 -0.1 54.6 61 1559 A S T 3 S- 0 0 90 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.634 118.8-111.2 -59.5 -18.1 16.4 0.3 56.0 62 1560 A G S < S+ 0 0 60 -3,-2.1 -2,-0.1 1,-0.4 2,-0.1 0.214 77.8 130.7 93.7 -12.5 15.0 -0.1 52.5 63 1561 A A - 0 0 40 -5,-0.1 -4,-2.0 1,-0.0 2,-0.5 -0.469 47.3-151.1 -68.4 146.6 13.9 3.6 52.4 64 1562 A R E -D 58 0A 151 -6,-0.2 2,-0.4 -2,-0.1 -6,-0.2 -0.980 18.2-172.7-123.3 110.4 14.9 5.6 49.3 65 1563 A M E -D 57 0A 69 -8,-2.4 -8,-3.4 -2,-0.5 2,-0.5 -0.902 20.6-133.4-111.8 134.3 15.3 9.3 50.1 66 1564 A I E -D 56 0A 67 -2,-0.4 2,-0.4 -10,-0.2 -10,-0.2 -0.708 22.7-163.7 -86.9 122.8 15.9 12.2 47.8 67 1565 A L E +D 55 0A 0 -12,-2.7 -12,-1.0 -2,-0.5 2,-0.3 -0.859 16.9 160.7-105.2 142.2 18.7 14.6 48.9 68 1566 A Q - 0 0 78 -2,-0.4 3,-0.1 -14,-0.1 14,-0.1 -0.952 52.8 -95.5-154.7 170.1 19.1 18.1 47.5 69 1567 A D S S+ 0 0 36 -2,-0.3 13,-2.8 1,-0.2 2,-0.4 0.853 109.9 21.8 -61.2 -37.8 20.7 21.5 48.2 70 1568 A E S S+ 0 0 121 11,-0.2 2,-0.2 4,-0.1 -1,-0.2 -0.984 75.7 127.6-139.2 126.4 17.4 22.9 49.7 71 1569 A D S > S- 0 0 41 -2,-0.4 3,-1.5 -3,-0.1 -4,-0.0 -0.794 73.2 -63.4-153.3-167.5 14.4 21.1 51.3 72 1570 A I T 3 S+ 0 0 166 1,-0.2 -2,-0.0 -2,-0.2 0, 0.0 0.691 127.1 60.2 -63.9 -16.4 12.2 21.1 54.4 73 1571 A T T 3 S+ 0 0 46 2,-0.1 -1,-0.2 9,-0.0 2,-0.2 0.562 79.7 104.5 -86.5 -9.9 15.3 20.0 56.5 74 1572 A T < - 0 0 24 -3,-1.5 2,-0.4 8,-0.0 7,-0.1 -0.541 68.1-137.4 -71.2 132.4 17.3 23.2 55.6 75 1573 A K 0 0 154 -2,-0.2 5,-0.7 5,-0.2 -2,-0.1 -0.809 360.0 360.0 -93.7 136.1 17.4 25.7 58.5 76 1574 A I 0 0 122 -2,-0.4 3,-0.3 3,-0.2 -1,-0.0 -0.602 360.0 360.0 -75.1 360.0 16.9 29.4 57.7 77 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 78 1578 A W 0 0 138 0, 0.0 2,-0.5 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 118.5 20.6 33.0 55.3 79 1579 A K - 0 0 59 -3,-0.3 2,-0.3 -5,-0.0 -3,-0.2 -0.955 360.0-139.3-108.1 125.4 20.1 29.3 54.4 80 1580 A R - 0 0 79 -5,-0.7 -5,-0.2 -2,-0.5 2,-0.1 -0.651 30.1-110.1 -76.4 137.3 23.2 27.0 54.3 81 1581 A L - 0 0 84 -2,-0.3 -11,-0.2 1,-0.1 -12,-0.1 -0.449 39.4-101.3 -69.3 143.1 23.1 24.6 51.3 82 1582 A N - 0 0 2 -13,-2.8 -55,-1.7 -2,-0.1 2,-0.2 -0.377 42.1-176.4 -70.4 144.2 22.6 21.0 52.4 83 1583 A T B > -E 26 0B 28 -57,-0.2 4,-1.5 -56,-0.1 -57,-0.2 -0.719 44.7 -98.0-127.5 173.6 25.6 18.6 52.4 84 1584 A L H >>S+ 0 0 2 -59,-0.7 5,-2.1 -62,-0.4 4,-0.6 0.854 126.1 56.1 -64.4 -34.5 26.0 14.9 53.1 85 1585 A A H >45S+ 0 0 50 -62,-1.8 3,-0.8 1,-0.2 -1,-0.2 0.892 102.0 57.2 -63.4 -39.7 27.1 15.8 56.7 86 1586 A H H 345S+ 0 0 63 -63,-0.3 -1,-0.2 1,-0.2 -2,-0.2 0.899 112.2 40.4 -53.3 -44.0 23.7 17.7 57.0 87 1587 A Y H 3<5S- 0 0 28 -4,-1.5 -1,-0.2 2,-0.1 -2,-0.2 0.483 108.6-126.1 -86.4 -3.6 21.9 14.5 56.2 88 1588 A Q T <<5 - 0 0 164 -3,-0.8 -3,-0.2 -4,-0.6 -2,-0.1 0.872 39.4-179.4 58.6 44.9 24.2 12.3 58.4 89 1589 A V < - 0 0 12 -5,-2.1 -1,-0.2 -66,-0.1 3,-0.1 -0.619 22.0-130.0 -78.3 120.7 24.9 10.0 55.5 90 1590 A P > - 0 0 72 0, 0.0 3,-1.7 0, 0.0 -1,-0.1 -0.332 28.7 -91.1 -69.2 153.1 27.3 7.2 56.6 91 1591 A D T 3 S+ 0 0 111 1,-0.2 -84,-0.2 -87,-0.1 -86,-0.0 -0.337 113.8 27.1 -58.7 139.9 30.5 6.2 54.8 92 1592 A G T 3 S+ 0 0 39 -86,-3.2 -1,-0.2 1,-0.2 -85,-0.2 0.418 83.5 157.2 85.3 0.5 29.7 3.5 52.3 93 1593 A S < - 0 0 14 -3,-1.7 -85,-2.7 -87,-0.4 2,-0.4 -0.242 43.8-117.3 -58.1 146.6 26.1 4.4 51.8 94 1594 A V E +bC 8 58A 41 -36,-0.6 -36,-2.5 -87,-0.2 2,-0.3 -0.689 40.2 174.4 -88.2 132.6 24.4 3.2 48.5 95 1595 A V E -bC 9 57A 1 -87,-2.3 -85,-2.7 -2,-0.4 2,-0.3 -0.924 15.2-164.6-137.8 156.9 23.2 6.0 46.2 96 1596 A A E - C 0 56A 8 -40,-1.8 -40,-3.1 -2,-0.3 2,-0.5 -0.957 22.1-125.4-136.6 154.5 21.6 6.4 42.7 97 1597 A L E - C 0 55A 32 -87,-0.3 2,-0.4 -2,-0.3 -42,-0.2 -0.933 29.6-164.7-100.7 129.2 21.1 9.3 40.4 98 1598 A V E - C 0 54A 52 -44,-2.5 -44,-2.3 -2,-0.5 2,-0.1 -0.935 18.7-119.7-117.5 130.1 17.4 9.7 39.3 99 1599 A S E - C 0 53A 93 -2,-0.4 2,-0.3 -46,-0.2 -46,-0.2 -0.378 28.0-120.5 -67.7 147.0 16.2 11.7 36.4 100 1600 A K - 0 0 91 -48,-1.7 2,-0.2 -2,-0.1 -1,-0.1 -0.714 24.4-112.6 -86.9 137.3 13.7 14.6 37.0 101 1601 A Q - 0 0 175 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 -0.470 25.1-161.2 -62.1 135.1 10.2 14.6 35.4 102 1602 A V 0 0 147 -2,-0.2 -1,-0.1 -50,-0.0 -2,-0.0 0.712 360.0 360.0 -96.1 -19.0 10.2 17.5 32.9 103 1603 A T 0 0 137 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.687 360.0 360.0 -98.8 360.0 6.3 17.9 32.5