==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 22-JAN-07 2E8O . COMPND 2 MOLECULE: SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.K.GORONCY,N.TOCHIO,S.KOSHIBA,S.WATANABE,T.HARADA,T.KIGAWA, . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8198.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 57.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 34.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 128 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 165.6 2.1 0.0 -1.2 2 2 A S + 0 0 131 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.816 360.0 166.4 -96.6 124.7 1.8 2.1 -4.4 3 3 A S + 0 0 119 -2,-0.5 2,-0.1 0, 0.0 0, 0.0 -0.996 27.8 71.0-141.0 132.5 -0.7 1.0 -7.0 4 4 A G + 0 0 73 -2,-0.4 2,-0.2 1,-0.1 -2,-0.0 -0.159 33.0 177.5 132.6 132.9 -2.1 2.8 -10.0 5 5 A S - 0 0 129 -2,-0.1 2,-0.3 0, 0.0 -1,-0.1 -0.776 6.2-170.0-165.5 115.0 -0.9 4.0 -13.4 6 6 A S + 0 0 129 -2,-0.2 2,-0.0 2,-0.0 -2,-0.0 -0.843 40.3 87.2-110.4 145.8 -2.8 5.8 -16.2 7 7 A G + 0 0 82 -2,-0.3 2,-0.3 1,-0.0 0, 0.0 0.160 33.7 169.5 130.9 110.8 -1.6 6.4 -19.8 8 8 A S - 0 0 123 -2,-0.0 2,-0.1 3,-0.0 -1,-0.0 -0.979 23.1-135.8-149.3 132.4 -1.7 4.3 -22.9 9 9 A N - 0 0 148 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.318 39.9 -84.4 -81.4 167.4 -1.0 5.1 -26.6 10 10 A T - 0 0 113 1,-0.1 -1,-0.1 -2,-0.1 0, 0.0 -0.546 46.0-126.3 -76.3 133.6 -3.2 4.0 -29.5 11 11 A P - 0 0 79 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.060 4.5-144.7 -69.8 175.6 -2.5 0.5 -30.8 12 12 A S S S+ 0 0 132 1,-0.4 2,-0.3 0, 0.0 -2,-0.0 0.737 77.7 12.1-111.0 -42.1 -1.7 -0.4 -34.5 13 13 A A - 0 0 89 2,-0.1 2,-0.4 0, 0.0 -1,-0.4 -0.998 53.6-163.2-142.3 143.7 -3.4 -3.8 -34.9 14 14 A E + 0 0 176 -2,-0.3 2,-0.3 -3,-0.1 0, 0.0 -0.816 41.8 115.7-130.7 92.8 -5.9 -5.9 -32.9 15 15 A A - 0 0 81 -2,-0.4 2,-0.3 2,-0.2 -2,-0.1 -0.891 69.1-106.3-146.4 175.2 -6.1 -9.5 -33.9 16 16 A D S S+ 0 0 177 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.368 91.6 67.6-103.7 52.1 -5.5 -13.0 -32.6 17 17 A W - 0 0 185 -2,-0.3 -2,-0.2 3,-0.0 4,-0.0 -0.955 55.2-166.0-166.7 147.3 -2.3 -13.7 -34.6 18 18 A S - 0 0 58 -2,-0.3 3,-0.2 1,-0.0 -2,-0.0 -0.971 32.9-122.3-139.8 153.7 1.3 -12.6 -34.8 19 19 A P S S+ 0 0 118 0, 0.0 2,-0.3 0, 0.0 -1,-0.0 0.563 107.0 42.0 -69.8 -7.8 4.2 -12.9 -37.3 20 20 A G + 0 0 37 1,-0.1 3,-0.1 3,-0.0 -3,-0.0 -0.795 60.4 134.8-146.6 100.7 6.2 -14.5 -34.5 21 21 A L - 0 0 117 1,-0.4 2,-0.3 -2,-0.3 -1,-0.1 0.810 67.2 -60.4-106.6 -62.2 4.8 -17.0 -32.1 22 22 A E - 0 0 175 0, 0.0 -1,-0.4 0, 0.0 2,-0.3 -0.957 42.4-110.8-171.0-176.4 7.2 -19.9 -31.7 23 23 A L - 0 0 49 -2,-0.3 4,-0.1 -3,-0.1 7,-0.0 -0.791 43.9 -73.7-128.7 171.8 9.1 -22.7 -33.4 24 24 A H - 0 0 105 -2,-0.3 3,-0.1 1,-0.1 -1,-0.1 -0.371 32.1-137.0 -67.6 142.5 9.2 -26.5 -33.5 25 25 A P S S+ 0 0 77 0, 0.0 2,-1.2 0, 0.0 72,-0.2 0.787 95.1 68.8 -69.7 -28.6 10.6 -28.3 -30.4 26 26 A D > + 0 0 94 1,-0.2 3,-2.6 3,-0.1 34,-0.1 -0.665 58.5 174.8 -95.3 80.9 12.5 -30.7 -32.7 27 27 A Y G > S+ 0 0 28 -2,-1.2 3,-2.1 1,-0.3 33,-0.6 0.751 72.0 79.0 -56.4 -23.4 15.1 -28.5 -34.3 28 28 A K G 3 S+ 0 0 136 1,-0.3 33,-0.3 32,-0.3 -1,-0.3 0.729 100.0 40.3 -58.0 -21.0 16.5 -31.7 -35.8 29 29 A T G < S+ 0 0 89 -3,-2.6 -1,-0.3 1,-0.1 -2,-0.2 -0.146 81.6 108.7-120.1 36.5 13.6 -31.3 -38.3 30 30 A W X> - 0 0 6 -3,-2.1 4,-1.9 3,-0.1 3,-0.5 0.789 58.1-171.9 -81.5 -30.1 13.8 -27.6 -38.8 31 31 A G H 3> - 0 0 16 -4,-0.3 4,-1.6 1,-0.2 5,-0.2 0.028 50.7 -51.5 63.3-177.0 15.2 -27.9 -42.3 32 32 A P H 3> S+ 0 0 37 0, 0.0 4,-0.5 0, 0.0 -1,-0.2 0.553 134.9 61.3 -69.8 -7.0 16.5 -25.0 -44.4 33 33 A E H X> S+ 0 0 146 -3,-0.5 4,-0.7 2,-0.2 3,-0.7 0.964 106.3 35.9 -82.5 -68.5 13.2 -23.2 -43.7 34 34 A Q H >X S+ 0 0 47 -4,-1.9 4,-3.0 1,-0.3 3,-1.7 0.896 115.2 58.5 -52.4 -44.2 13.1 -22.8 -39.9 35 35 A V H 3X S+ 0 0 0 -4,-1.6 4,-1.7 1,-0.3 -1,-0.3 0.872 99.8 57.1 -54.3 -39.5 16.8 -22.2 -39.9 36 36 A C H << S+ 0 0 19 -3,-0.7 4,-0.3 -4,-0.5 -1,-0.3 0.713 114.5 39.7 -65.4 -19.9 16.3 -19.3 -42.3 37 37 A S H X S+ 0 0 14 -4,-3.0 3,-1.6 1,-0.2 4,-0.9 0.941 103.7 48.6 -51.5 -54.2 15.9 -18.8 -36.5 39 39 A L H >X>S+ 0 0 1 -4,-1.7 5,-1.5 1,-0.3 4,-1.4 0.871 104.2 61.0 -55.2 -38.9 18.9 -16.6 -37.5 40 40 A R H 345S+ 0 0 127 -4,-0.3 -1,-0.3 1,-0.3 -2,-0.2 0.763 100.1 56.6 -60.3 -24.9 16.4 -13.7 -38.1 41 41 A R H <<5S+ 0 0 142 -3,-1.6 -1,-0.3 -4,-1.0 -2,-0.2 0.755 104.8 51.1 -78.2 -25.8 15.5 -14.0 -34.5 42 42 A G H <<5S- 0 0 37 -3,-1.0 -2,-0.2 -4,-0.9 -1,-0.2 0.741 127.1 -94.5 -82.8 -24.3 19.0 -13.4 -33.4 43 43 A G T <5S+ 0 0 53 -4,-1.4 2,-0.5 1,-0.4 -3,-0.2 0.180 84.1 127.4 130.5 -15.5 19.5 -10.3 -35.5 44 44 A F < + 0 0 12 -5,-1.5 -1,-0.4 1,-0.1 -2,-0.2 -0.623 17.2 159.2 -77.8 121.9 21.0 -11.8 -38.7 45 45 A E + 0 0 145 -2,-0.5 -1,-0.1 -3,-0.1 -5,-0.1 0.030 22.3 141.3-129.9 24.4 19.1 -10.7 -41.8 46 46 A E > - 0 0 53 1,-0.1 4,-1.7 2,-0.0 5,-0.2 -0.478 45.3-147.4 -72.9 137.5 21.8 -11.3 -44.4 47 47 A P H > S+ 0 0 99 0, 0.0 4,-2.0 0, 0.0 -1,-0.1 0.917 98.1 50.4 -69.8 -45.6 20.6 -12.7 -47.8 48 48 A V H > S+ 0 0 64 2,-0.2 4,-2.1 1,-0.2 5,-0.2 0.864 109.2 53.6 -61.6 -37.1 23.8 -14.7 -48.5 49 49 A L H > S+ 0 0 2 1,-0.2 4,-0.9 26,-0.2 -1,-0.2 0.956 114.9 37.7 -63.0 -52.4 23.6 -16.2 -45.0 50 50 A L H X S+ 0 0 21 -4,-1.7 4,-0.7 1,-0.2 -1,-0.2 0.739 111.8 63.4 -71.4 -22.8 20.1 -17.5 -45.4 51 51 A K H >X S+ 0 0 104 -4,-2.0 4,-1.3 1,-0.2 3,-1.2 0.939 99.1 50.8 -66.7 -48.5 20.8 -18.3 -49.0 52 52 A N H 3X S+ 0 0 22 -4,-2.1 4,-2.3 22,-0.5 6,-0.4 0.821 98.5 69.3 -59.1 -31.4 23.5 -20.9 -48.2 53 53 A I H 3<>S+ 0 0 2 -4,-0.9 5,-1.3 1,-0.3 -1,-0.3 0.854 107.9 36.0 -55.7 -36.4 21.0 -22.5 -45.8 54 54 A R H <<5S+ 0 0 194 -3,-1.2 -1,-0.3 -4,-0.7 -2,-0.2 0.680 114.8 56.6 -89.7 -21.2 18.9 -23.6 -48.8 55 55 A E H <5S+ 0 0 124 -4,-1.3 -2,-0.2 1,-0.2 -3,-0.2 0.721 120.5 29.3 -81.3 -23.0 22.0 -24.3 -50.9 56 56 A N T <5S- 0 0 86 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.197 105.9-120.4-119.3 11.9 23.4 -26.7 -48.3 57 57 A E T 5 - 0 0 147 1,-0.2 -3,-0.2 -5,-0.2 -4,-0.1 0.803 42.2-166.9 51.7 30.2 20.0 -27.9 -47.0 58 58 A I < - 0 0 6 -5,-1.3 2,-0.3 -6,-0.4 -23,-0.2 -0.243 8.2-174.9 -51.4 125.7 21.3 -26.5 -43.6 59 59 A T >> - 0 0 31 -3,-0.2 3,-1.9 -27,-0.1 4,-1.5 -0.767 42.0 -99.4-122.2 168.3 19.0 -27.8 -40.9 60 60 A G T 34 S+ 0 0 0 -33,-0.6 -32,-0.3 1,-0.3 5,-0.1 0.828 123.3 58.4 -54.7 -33.5 18.6 -27.3 -37.1 61 61 A A T 34 S+ 0 0 34 -34,-0.5 -1,-0.3 -33,-0.3 -33,-0.1 0.706 111.0 42.4 -69.8 -19.7 20.5 -30.6 -36.6 62 62 A L T X> S+ 0 0 70 -3,-1.9 4,-2.2 2,-0.1 3,-0.9 0.607 94.0 83.0 -99.5 -17.2 23.4 -29.1 -38.5 63 63 A L T 3< S+ 0 0 2 -4,-1.5 3,-0.5 1,-0.3 -2,-0.2 0.953 97.6 39.6 -49.9 -58.6 23.2 -25.6 -36.9 64 64 A P T 34 S+ 0 0 42 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.562 112.9 61.0 -69.8 -7.8 25.2 -26.7 -33.9 65 65 A C T <4 S+ 0 0 81 -3,-0.9 -2,-0.2 -5,-0.1 -3,-0.1 0.823 84.4 88.7 -87.4 -36.3 27.4 -28.7 -36.2 66 66 A L < - 0 0 14 -4,-2.2 2,-0.2 -3,-0.5 3,-0.0 -0.350 63.1-162.1 -64.8 141.6 28.6 -25.7 -38.3 67 67 A D > - 0 0 88 -2,-0.0 4,-2.8 1,-0.0 5,-0.2 -0.479 38.2 -79.8-114.3-173.8 31.8 -24.0 -37.0 68 68 A E H > S+ 0 0 77 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.954 129.9 47.8 -52.1 -57.4 33.4 -20.6 -37.5 69 69 A S H > S+ 0 0 93 1,-0.2 4,-0.8 2,-0.2 -1,-0.2 0.889 112.0 52.2 -51.9 -43.0 35.0 -21.7 -40.8 70 70 A R H >> S+ 0 0 144 1,-0.2 3,-1.7 2,-0.2 4,-1.5 0.967 109.0 47.1 -58.9 -56.5 31.7 -23.0 -41.9 71 71 A F H 3<>S+ 0 0 3 -4,-2.8 5,-2.2 1,-0.3 4,-0.5 0.871 106.2 60.1 -53.7 -39.5 29.7 -19.8 -41.2 72 72 A E H 3<5S+ 0 0 88 -4,-2.5 -1,-0.3 1,-0.2 -2,-0.2 0.761 109.3 43.8 -61.1 -24.5 32.5 -17.9 -43.0 73 73 A N H <<5S+ 0 0 132 -3,-1.7 -1,-0.2 -4,-0.8 -2,-0.2 0.692 103.8 63.4 -92.3 -22.9 31.6 -19.9 -46.1 74 74 A L T <5S- 0 0 10 -4,-1.5 -22,-0.5 -3,-0.2 -2,-0.2 0.481 132.7 -85.6 -79.5 -2.1 27.8 -19.6 -45.6 75 75 A G T 5S+ 0 0 11 -4,-0.5 2,-2.1 -5,-0.2 -26,-0.2 0.134 101.9 115.3 119.4 -18.9 28.2 -15.8 -46.0 76 76 A V < + 0 0 0 -5,-2.2 2,-2.1 -6,-0.2 6,-0.3 -0.333 31.1 157.1 -80.6 57.4 29.1 -14.9 -42.5 77 77 A S + 0 0 84 -2,-2.1 2,-0.4 -5,-0.2 -1,-0.1 -0.360 36.6 107.1 -81.5 59.3 32.5 -13.7 -43.4 78 78 A S > - 0 0 58 -2,-2.1 4,-2.4 1,-0.1 5,-0.4 -0.986 65.5-145.0-142.7 128.8 32.8 -11.4 -40.4 79 79 A L H > S+ 0 0 109 -2,-0.4 4,-1.2 1,-0.2 -1,-0.1 0.865 107.8 40.7 -57.3 -37.5 34.9 -11.9 -37.2 80 80 A G H > S+ 0 0 39 2,-0.2 4,-1.2 3,-0.1 -1,-0.2 0.915 113.3 51.9 -78.0 -45.4 32.1 -10.2 -35.3 81 81 A E H >> S+ 0 0 60 2,-0.2 4,-3.1 1,-0.2 3,-1.3 0.970 113.0 43.5 -54.8 -60.4 29.2 -11.9 -37.0 82 82 A R H 3X S+ 0 0 25 -4,-2.4 4,-3.3 -6,-0.3 5,-0.4 0.917 108.2 59.4 -52.1 -48.3 30.5 -15.4 -36.5 83 83 A K H 3X S+ 0 0 133 -4,-1.2 4,-0.7 -5,-0.4 -1,-0.3 0.797 114.6 38.5 -52.0 -29.4 31.5 -14.7 -33.0 84 84 A K H < S+ 0 0 20 -4,-1.9 3,-2.1 2,-0.2 4,-0.4 0.988 103.8 45.5 -66.3 -61.7 23.7 -17.9 -30.8 89 89 A I H >X S+ 0 0 2 -4,-2.5 4,-1.5 1,-0.3 3,-1.4 0.786 105.4 66.1 -53.0 -28.1 23.1 -21.4 -32.1 90 90 A Q H 3X S+ 0 0 109 -4,-0.9 4,-1.6 -5,-0.3 -1,-0.3 0.826 92.6 59.2 -64.1 -32.0 24.6 -22.5 -28.7 91 91 A R H << S+ 0 0 143 -3,-2.1 -1,-0.3 -4,-0.8 -2,-0.2 0.563 106.0 52.8 -73.7 -7.7 21.6 -21.0 -27.0 92 92 A L H X> S+ 0 0 8 -3,-1.4 4,-3.1 -4,-0.4 3,-2.1 0.928 110.3 37.8 -89.8 -67.4 19.4 -23.3 -29.0 93 93 A V H 3< S+ 0 0 40 -4,-1.5 -2,-0.2 1,-0.3 -3,-0.1 0.867 110.2 64.1 -53.0 -39.3 20.9 -26.8 -28.4 94 94 A Q T 3< S+ 0 0 122 -4,-1.6 -1,-0.3 -5,-0.3 -2,-0.1 0.749 118.2 27.3 -57.6 -23.4 21.5 -25.9 -24.8 95 95 A I T X4 S+ 0 0 90 -3,-2.1 3,-1.3 -5,-0.1 -2,-0.2 0.838 109.1 72.4-102.9 -57.6 17.7 -25.6 -24.5 96 96 A H T 3< S+ 0 0 46 -4,-3.1 3,-0.1 1,-0.3 -70,-0.1 -0.329 111.6 10.7 -62.9 141.1 16.2 -27.9 -27.1 97 97 A V T 3 S+ 0 0 117 -72,-0.2 2,-0.4 1,-0.2 -1,-0.3 0.813 98.8 144.7 59.2 30.7 16.5 -31.6 -26.3 98 98 A D < - 0 0 73 -3,-1.3 -1,-0.2 2,-0.2 -4,-0.1 -0.809 63.4-124.5-103.9 142.6 17.6 -30.6 -22.8 99 99 A T S S+ 0 0 123 -2,-0.4 2,-0.5 -3,-0.1 -1,-0.1 0.803 100.6 66.0 -51.0 -30.7 16.8 -32.5 -19.6 100 100 A M S S- 0 0 131 -5,-0.1 2,-0.4 -4,-0.1 -2,-0.2 -0.827 70.8-168.2 -99.7 131.4 15.4 -29.2 -18.3 101 101 A K + 0 0 201 -2,-0.5 2,-0.3 -4,-0.1 -5,-0.1 -0.944 10.4 167.8-121.1 140.4 12.3 -27.7 -20.0 102 102 A V 0 0 128 -2,-0.4 -2,-0.0 1,-0.2 0, 0.0 -0.988 360.0 360.0-152.3 140.0 10.9 -24.2 -19.6 103 103 A I 0 0 214 -2,-0.3 -1,-0.2 0, 0.0 0, 0.0 0.989 360.0 360.0 -73.5 360.0 8.3 -22.1 -21.3