==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=16-OCT-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GLYCOPROTEIN 18-OCT-00 1E9J . COMPND 2 MOLECULE: CHORIONIC GONADOTROPIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR P.J.A.ERBEL,Y.KARIMI-NEJAD,J.A.VANKUIK,R.BOELENS, . 92 1 5 5 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8097.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 6.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 124 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 157.4 5.0 19.0 6.0 2 2 A P - 0 0 125 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.851 360.0 -44.4 -48.1 -40.8 6.1 21.0 2.9 3 3 A D - 0 0 76 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.681 67.2 -78.7-161.3-144.8 3.7 19.0 0.8 4 4 A V > - 0 0 99 -2,-0.2 3,-2.8 29,-0.0 29,-0.1 0.138 51.2-120.8-126.5 17.3 2.4 15.4 0.2 5 5 A Q T 3 - 0 0 120 1,-0.3 28,-0.0 28,-0.0 0, 0.0 0.735 67.7 -72.4 48.4 22.6 5.2 14.1 -1.9 6 6 A D T 3 S+ 0 0 154 1,-0.2 -1,-0.3 25,-0.0 0, 0.0 0.857 115.4 103.5 62.6 36.0 2.5 13.5 -4.5 7 7 A a < - 0 0 47 -3,-2.8 -1,-0.2 24,-0.1 23,-0.0 -0.956 58.1-147.6-151.8 128.2 1.2 10.6 -2.4 8 8 A P - 0 0 68 0, 0.0 2,-0.8 0, 0.0 25,-0.5 0.029 42.1 -74.1 -79.9-168.1 -1.8 10.4 -0.0 9 9 A E B -A 32 0A 130 21,-0.2 23,-0.3 23,-0.1 20,-0.1 -0.823 57.0-107.6 -97.7 105.3 -2.3 8.3 3.2 10 10 A b S S+ 0 0 16 21,-2.5 2,-0.3 -2,-0.8 20,-0.2 0.111 71.6 106.7 -28.8 130.0 -2.7 4.7 2.3 11 11 A T - 0 0 72 16,-0.1 18,-3.6 70,-0.1 2,-0.3 -0.971 69.7 -42.6 175.9-169.7 -6.3 3.7 2.9 12 12 A L - 0 0 44 16,-0.3 2,-0.4 -2,-0.3 16,-0.2 -0.641 35.3-157.2 -85.1 136.8 -9.6 2.8 1.3 13 13 A Q - 0 0 95 14,-0.5 -1,-0.1 -2,-0.3 13,-0.1 -0.516 36.1-119.0-112.4 62.7 -10.8 4.9 -1.7 14 14 A E - 0 0 100 -2,-0.4 12,-0.5 1,-0.2 11,-0.2 0.527 37.2 -90.3 -0.2 125.7 -14.5 4.2 -1.5 15 15 A N > - 0 0 3 10,-0.2 4,-1.6 1,-0.2 -1,-0.2 -0.329 30.6-154.5 -55.0 110.2 -15.8 2.5 -4.6 16 16 A P T 4 S+ 0 0 117 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.220 94.9 41.3 -73.5 18.6 -16.8 5.3 -7.0 17 17 A F T 4 S+ 0 0 106 3,-0.0 -2,-0.1 54,-0.0 -3,-0.0 0.600 115.5 40.8-127.0 -53.4 -19.1 2.7 -8.5 18 18 A F T 4 S+ 0 0 65 8,-0.1 2,-0.6 2,-0.0 7,-0.2 0.585 84.6 119.7 -77.3 -11.9 -20.7 0.7 -5.7 19 19 A S < + 0 0 31 -4,-1.6 7,-0.0 5,-0.2 -5,-0.0 -0.416 38.7 149.8 -61.0 107.7 -21.1 3.9 -3.7 20 20 A Q B > -B 23 0B 123 3,-2.8 3,-3.7 -2,-0.6 2,-3.6 -0.952 63.9 -76.4-139.7 158.2 -24.9 4.2 -3.1 21 21 A P T 3 S+ 0 0 146 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.180 131.9 15.8 -53.4 68.0 -27.2 5.7 -0.5 22 22 A G T 3 S+ 0 0 81 -2,-3.6 -3,-0.1 0, 0.0 0, 0.0 0.241 124.6 56.8 146.7 -10.3 -26.5 2.7 1.8 23 23 A A B < +B 20 0B 34 -3,-3.7 -3,-2.8 -5,-0.1 2,-0.6 -0.766 47.2 173.9-154.8 101.6 -23.4 1.1 0.4 24 24 A P - 0 0 66 0, 0.0 -5,-0.2 0, 0.0 -9,-0.1 -0.584 22.2-166.8-107.5 65.4 -20.1 3.0 -0.1 25 25 A I - 0 0 4 -2,-0.6 -10,-0.2 -11,-0.2 2,-0.2 0.411 7.0-160.7 -39.1-175.7 -17.8 0.2 -1.2 26 26 A L - 0 0 22 -12,-0.5 52,-0.2 50,-0.1 -1,-0.1 -0.713 24.8-153.4-150.9-158.7 -14.0 0.7 -1.3 27 27 A Q - 0 0 62 -2,-0.2 -14,-0.5 50,-0.1 -16,-0.1 -0.077 39.5-111.3 161.7 86.3 -10.6 -0.3 -2.6 28 28 A c + 0 0 29 -16,-0.2 2,-0.3 48,-0.2 -16,-0.3 0.026 52.8 159.8 -32.0 111.5 -7.5 0.5 -0.5 29 29 A M + 0 0 82 -18,-3.6 2,-0.3 -20,-0.1 -20,-0.1 -0.947 21.8 63.5-148.2 123.4 -5.7 3.1 -2.5 30 30 A G S S- 0 0 39 -2,-0.3 2,-0.4 -20,-0.2 -21,-0.2 -0.990 73.8 -63.6 162.0-163.2 -3.0 5.6 -1.4 31 31 A a - 0 0 29 -2,-0.3 -21,-2.5 -23,-0.3 3,-0.1 -0.981 19.5-156.3-125.2 130.6 0.5 6.0 -0.0 32 32 A d B -A 9 0A 37 -2,-0.4 -23,-0.1 24,-0.4 27,-0.1 -0.020 48.2-118.0 -91.9 30.7 1.7 4.8 3.4 33 33 A F - 0 0 121 -25,-0.5 25,-0.4 -29,-0.1 2,-0.3 -0.045 35.1 -83.8 61.9-170.9 4.6 7.3 3.4 34 34 A S - 0 0 61 -3,-0.1 2,-0.3 23,-0.1 22,-0.1 -0.970 24.3-164.5-135.6 151.0 8.2 6.3 3.5 35 35 A R + 0 0 249 20,-0.5 2,-0.3 -2,-0.3 21,-0.0 -0.682 28.5 156.0-135.8 80.3 10.7 5.3 6.2 36 36 A A + 0 0 72 -2,-0.3 -2,-0.1 2,-0.0 19,-0.1 -0.770 16.5 179.7-107.8 153.0 14.3 5.4 4.9 37 37 A Y - 0 0 189 -2,-0.3 -2,-0.0 2,-0.0 2,-0.0 -0.761 21.7-138.4-155.3 101.4 17.5 5.8 6.8 38 38 A P - 0 0 118 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.309 21.0-172.0 -62.2 140.3 21.0 5.9 5.1 39 39 A T - 0 0 79 -2,-0.0 2,-1.5 0, 0.0 -2,-0.0 -0.990 27.3-124.8-140.1 128.0 23.8 4.0 6.8 40 40 A P + 0 0 129 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.536 45.9 163.7 -73.5 89.2 27.5 3.9 5.9 41 41 A L - 0 0 139 -2,-1.5 0, 0.0 1,-0.0 0, 0.0 0.388 46.0-106.7 -80.9-141.4 28.1 0.2 5.5 42 42 A R - 0 0 217 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 0.620 31.6-147.7-124.1 -35.2 31.1 -1.4 3.7 43 43 A S - 0 0 32 6,-0.1 5,-0.0 0, 0.0 0, 0.0 0.974 6.7-151.1 58.4 86.9 29.8 -2.7 0.4 44 44 A K S S+ 0 0 181 5,-0.0 5,-0.1 0, 0.0 4,-0.0 0.966 74.4 30.0 -48.7 -81.3 31.9 -5.8 -0.3 45 45 A K S S- 0 0 147 2,-0.0 4,-0.1 0, 0.0 0, 0.0 0.379 121.3 -11.7 -61.8-155.9 31.8 -5.9 -4.1 46 46 A T S S- 0 0 95 1,-0.2 0, 0.0 0, 0.0 0, 0.0 0.236 104.3 -64.4 -34.7 167.5 31.6 -2.8 -6.3 47 47 A M S S+ 0 0 170 2,-0.0 2,-0.2 -3,-0.0 -1,-0.2 0.765 130.6 28.8 -27.2 -40.4 30.7 0.5 -4.7 48 48 A L S S- 0 0 101 -5,-0.0 2,-0.4 -4,-0.0 3,-0.1 -0.753 77.8-135.9-121.9 169.6 27.4 -1.3 -4.0 49 49 A V - 0 0 54 -2,-0.2 -6,-0.1 1,-0.1 -2,-0.0 -0.988 61.5 -29.1-132.7 125.4 26.3 -4.9 -3.3 50 50 A Q S S- 0 0 154 -2,-0.4 2,-0.4 1,-0.1 -1,-0.1 0.011 91.0 -60.2 62.1-176.1 23.2 -6.6 -4.8 51 51 A K + 0 0 192 -3,-0.1 2,-0.3 2,-0.0 -1,-0.1 -0.894 54.4 176.3-108.8 132.6 20.1 -4.6 -5.7 52 52 A N - 0 0 141 -2,-0.4 2,-0.2 3,-0.0 -2,-0.0 -0.977 17.3-140.3-134.8 147.4 18.1 -2.6 -3.2 53 53 A V - 0 0 65 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.659 25.7-117.5-104.8 161.8 15.0 -0.3 -3.4 54 54 A T - 0 0 90 -2,-0.2 -19,-0.2 -18,-0.1 -1,-0.1 0.658 50.9-133.2 -69.4 -15.5 14.2 2.9 -1.6 55 55 A S + 0 0 72 -21,-0.1 -20,-0.5 -19,-0.1 3,-0.1 0.888 62.9 120.8 60.2 105.1 11.3 1.2 -0.1 56 56 A E + 0 0 114 -22,-0.1 2,-3.4 -21,-0.0 -24,-0.4 0.313 40.4 94.9-160.8 -34.7 8.1 3.3 -0.3 57 57 A S - 0 0 114 -26,-0.1 -23,-0.1 -25,-0.0 -26,-0.0 -0.281 62.2-177.4 -69.9 60.2 5.5 1.3 -2.2 58 58 A T - 0 0 57 -2,-3.4 2,-0.5 -25,-0.4 -26,-0.2 -0.281 17.6-138.0 -61.5 145.0 4.0 -0.0 1.0 59 59 A e - 0 0 29 -28,-0.1 2,-0.2 -27,-0.1 -1,-0.1 -0.935 19.2-175.6-113.6 122.8 1.1 -2.5 0.7 60 60 A b - 0 0 15 -2,-0.5 2,-1.1 24,-0.3 24,-0.3 -0.379 11.0-170.3-109.8 52.5 -2.0 -2.2 2.9 61 61 A V - 0 0 78 24,-0.5 22,-0.1 25,-0.3 -2,-0.1 -0.188 52.0 -88.3 -46.9 87.2 -3.8 -5.3 1.7 62 62 A A - 0 0 12 -2,-1.1 20,-0.4 1,-0.2 -1,-0.2 0.485 33.0-141.1 -0.9 111.8 -7.0 -4.6 3.5 63 63 A K S S+ 0 0 148 -3,-0.2 2,-0.3 1,-0.2 19,-0.2 0.855 90.0 12.5 -56.1 -33.3 -6.6 -6.2 7.0 64 64 A S B S-C 81 0C 57 17,-1.5 16,-2.2 13,-0.1 17,-1.9 -0.981 77.5-158.5-143.3 149.3 -10.2 -7.1 6.6 65 65 A Y - 0 0 142 -2,-0.3 13,-0.4 14,-0.3 14,-0.3 -0.934 24.3-166.7-132.1 158.5 -12.6 -7.0 3.6 66 66 A N - 0 0 107 11,-0.7 12,-0.5 -2,-0.3 11,-0.1 -0.089 38.1-154.1-129.2 29.0 -16.3 -6.9 3.0 67 67 A R - 0 0 125 1,-0.1 8,-0.1 10,-0.1 -2,-0.0 0.463 22.0-179.6 -7.1 129.5 -15.8 -7.8 -0.7 68 68 A V - 0 0 30 -42,-0.1 -1,-0.1 5,-0.0 6,-0.1 -0.316 22.5-146.5-139.1 48.9 -18.6 -6.6 -2.9 69 69 A T - 0 0 75 4,-0.1 6,-0.2 1,-0.1 2,-0.1 0.195 27.8-178.5 -22.2 118.3 -17.5 -7.8 -6.3 70 70 A V >> - 0 0 14 1,-0.3 4,-2.7 2,-0.1 3,-1.0 -0.311 36.8 -9.9-112.5-164.1 -18.7 -5.1 -8.8 71 71 A M G >4 S+ 0 0 89 1,-0.3 3,-2.2 2,-0.3 -1,-0.3 0.226 132.5 13.3 -26.8 147.5 -18.6 -4.5 -12.5 72 72 A G G 34 S- 0 0 88 1,-0.3 -1,-0.3 -3,-0.1 -2,-0.1 0.732 137.7 -65.4 48.7 21.9 -16.4 -6.9 -14.5 73 73 A G G <4 S- 0 0 38 -3,-1.0 -1,-0.3 -4,-0.1 -2,-0.3 0.862 81.6-173.2 70.4 36.6 -16.4 -8.9 -11.3 74 74 A F << - 0 0 71 -4,-2.7 2,-0.2 -3,-2.2 -2,-0.1 0.097 14.7-146.9 -52.6 174.7 -14.5 -6.3 -9.4 75 75 A K + 0 0 117 -6,-0.2 -8,-0.1 -7,-0.1 -1,-0.1 -0.660 29.6 162.1-154.1 91.0 -13.2 -7.0 -5.9 76 76 A V > - 0 0 1 -2,-0.2 3,-2.0 -10,-0.1 -10,-0.3 0.225 40.7-142.6 -91.2 11.5 -13.1 -4.1 -3.3 77 77 A E T 3 - 0 0 53 1,-0.3 -11,-0.7 -12,-0.2 3,-0.3 0.820 42.6-107.5 24.9 41.0 -12.9 -6.7 -0.6 78 78 A N T 3 - 0 0 25 -12,-0.5 -1,-0.3 -13,-0.4 -51,-0.0 0.553 45.2-128.0 -0.4 68.0 -15.1 -3.9 0.8 79 79 A H < + 0 0 21 -3,-2.0 -14,-0.3 -14,-0.3 -1,-0.2 -0.056 43.0 170.9 -41.1 118.7 -12.1 -3.1 2.9 80 80 A T S S+ 0 0 82 -16,-2.2 2,-0.3 1,-0.4 -15,-0.2 0.559 75.2 17.2-103.9 -16.6 -13.0 -2.9 6.5 81 81 A A B -C 64 0C 28 -17,-1.9 -17,-1.5 -21,-0.1 2,-0.4 -0.982 64.0-162.8-156.0 144.7 -9.4 -2.6 7.6 82 82 A c - 0 0 38 -20,-0.4 2,-0.5 -2,-0.3 -21,-0.2 -0.986 4.8-176.8-137.1 125.9 -6.1 -1.8 5.8 83 83 A H - 0 0 62 -2,-0.4 -22,-0.3 2,-0.1 -24,-0.1 -0.927 22.7-135.2-126.8 108.4 -2.5 -2.6 7.0 84 84 A d S S+ 0 0 29 -2,-0.5 -24,-0.3 -24,-0.3 -26,-0.1 0.117 71.8 20.8 -48.9 170.7 0.4 -1.4 5.0 85 85 A S S S+ 0 0 71 -28,-0.0 -24,-0.5 -25,-0.0 -2,-0.1 -0.055 81.6 91.4 58.7-165.6 3.4 -3.8 4.4 86 86 A T + 0 0 73 1,-0.1 -25,-0.3 -26,-0.1 2,-0.2 0.898 56.5 169.8 42.6 97.9 2.9 -7.5 4.7 87 87 A e - 0 0 52 -27,-0.1 3,-0.4 -29,-0.0 -1,-0.1 -0.718 52.3 -96.4-127.6 177.9 1.9 -8.7 1.2 88 88 A Y S S+ 0 0 215 1,-0.3 -2,-0.0 -2,-0.2 2,-0.0 0.413 117.3 1.4 -77.2 4.7 1.5 -12.1 -0.6 89 89 A Y S S- 0 0 165 0, 0.0 -1,-0.3 0, 0.0 2,-0.1 -0.200 76.8-156.6 169.2 89.1 5.0 -11.6 -1.9 90 90 A H + 0 0 143 -3,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.355 66.6 50.0 -74.9 156.6 7.2 -8.6 -1.0 91 91 A K 0 0 144 -2,-0.1 -1,-0.1 1,-0.0 0, 0.0 0.965 360.0 360.0 78.5 79.6 10.1 -7.4 -3.2 92 92 A S 0 0 161 0, 0.0 -2,-0.0 0, 0.0 -1,-0.0 0.100 360.0 360.0-169.1 360.0 8.8 -7.1 -6.7