==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL MOTILITY FACTOR 26-OCT-00 1E9T . COMPND 2 MOLECULE: INTESTINAL TREFOIL FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.LEMERCINIER,F.MUSKETT,B.CHEESEMAN,P.MCINTOSH,M.CARR . 59 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4817.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 18 30.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 235 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 46.3 0.7 -16.9 14.9 2 2 A E - 0 0 196 2,-0.0 2,-0.0 0, 0.0 0, 0.0 0.165 360.0 -60.3 52.4-179.8 1.6 -15.8 11.4 3 3 A Y - 0 0 128 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.101 45.1-162.3 -84.2-174.0 2.3 -12.2 10.7 4 4 A V - 0 0 93 3,-0.0 2,-1.0 -2,-0.0 -2,-0.0 -0.721 17.8-135.6-175.8 121.0 0.1 -9.1 11.0 5 5 A G + 0 0 48 -2,-0.2 3,-0.1 1,-0.1 4,-0.0 -0.733 41.7 147.6 -87.1 101.2 0.2 -5.7 9.5 6 6 A L + 0 0 131 -2,-1.0 2,-0.3 0, 0.0 -1,-0.1 -0.090 69.7 0.4-122.3 30.5 -0.6 -3.3 12.4 7 7 A S S S- 0 0 74 1,-0.3 4,-0.5 0, 0.0 3,-0.5 -0.967 103.9 -47.3 172.0-174.2 1.6 -0.4 11.1 8 8 A A S > S+ 0 0 58 -2,-0.3 3,-3.5 1,-0.2 2,-0.3 0.910 91.4 101.7 -40.6 -90.2 4.0 0.7 8.4 9 9 A N G > S+ 0 0 81 1,-0.3 3,-2.4 2,-0.3 43,-0.2 -0.131 93.3 34.6 41.5 -93.4 6.3 -2.3 8.2 10 10 A Q G 3 S+ 0 0 55 -3,-0.5 42,-3.4 -2,-0.3 -1,-0.3 0.871 130.4 38.0 -50.9 -41.3 4.7 -3.7 5.0 11 11 A a G < S+ 0 0 26 -3,-3.5 -1,-0.3 -4,-0.5 -2,-0.3 -0.244 83.2 118.5-104.4 41.3 4.2 -0.1 4.0 12 12 A A < + 0 0 48 -3,-2.4 -1,-0.2 -4,-0.3 -3,-0.1 -0.239 41.5 131.8 -99.9 42.1 7.5 1.0 5.4 13 13 A V - 0 0 13 1,-0.1 -2,-0.0 -5,-0.1 36,-0.0 -0.658 55.3-142.3 -95.7 152.1 8.7 2.1 2.0 14 14 A P - 0 0 76 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.967 50.0 -97.9 -75.0 -57.9 10.4 5.4 1.2 15 15 A A S > S+ 0 0 29 29,-0.0 3,-0.6 26,-0.0 -2,-0.0 0.078 113.9 73.6 160.2 -24.6 8.9 6.1 -2.2 16 16 A K T 3 S+ 0 0 168 1,-0.2 -3,-0.0 29,-0.1 0, 0.0 0.300 98.7 52.0 -92.7 7.1 11.7 5.0 -4.5 17 17 A D T 3 S+ 0 0 65 35,-0.0 2,-0.6 32,-0.0 -1,-0.2 0.173 77.1 127.1-124.2 11.1 10.8 1.4 -3.7 18 18 A R < - 0 0 24 -3,-0.6 30,-0.1 1,-0.2 29,-0.0 -0.636 39.3-170.4 -77.0 116.9 7.0 1.7 -4.4 19 19 A V - 0 0 91 -2,-0.6 -1,-0.2 31,-0.2 30,-0.1 0.550 38.5-130.3 -81.6 -8.9 6.0 -1.0 -6.8 20 20 A D - 0 0 82 26,-0.2 29,-0.3 30,-0.2 27,-0.1 0.809 14.2-148.9 58.8 116.0 2.7 0.9 -7.1 21 21 A b - 0 0 36 27,-2.1 28,-0.2 16,-0.2 -1,-0.1 0.681 35.3-131.3 -84.9 -20.9 -0.3 -1.4 -6.7 22 22 A G + 0 0 46 26,-1.0 27,-0.1 1,-0.2 -2,-0.0 0.952 39.9 166.8 66.6 93.4 -2.3 0.8 -9.0 23 23 A Y - 0 0 46 1,-0.2 3,-0.3 25,-0.1 25,-0.2 -0.985 35.0-147.3-140.2 149.0 -5.7 1.7 -7.5 24 24 A P S S+ 0 0 120 0, 0.0 2,-1.5 0, 0.0 -1,-0.2 0.986 95.1 31.3 -75.0 -75.4 -8.4 4.2 -8.1 25 25 A H S S+ 0 0 93 5,-0.1 2,-0.4 2,-0.0 0, 0.0 -0.673 82.2 174.2 -89.0 84.9 -9.9 5.1 -4.7 26 26 A V + 0 0 35 -2,-1.5 21,-0.1 -3,-0.3 12,-0.0 -0.778 5.9 154.2 -96.0 136.4 -6.8 4.7 -2.6 27 27 A T >> - 0 0 39 -2,-0.4 4,-1.4 20,-0.0 2,-1.4 -0.932 60.0 -85.7-151.6 171.5 -6.9 5.7 1.1 28 28 A P T 45S+ 0 0 101 0, 0.0 -2,-0.0 0, 0.0 12,-0.0 -0.095 129.3 10.2 -74.9 39.5 -5.4 5.0 4.5 29 29 A K T 45S+ 0 0 156 -2,-1.4 5,-0.1 8,-0.0 -3,-0.0 0.076 126.5 56.2-177.5 -45.4 -7.8 2.1 4.8 30 30 A E T >5S+ 0 0 71 2,-0.2 4,-2.6 1,-0.2 3,-0.3 0.864 112.0 45.2 -72.6 -38.3 -9.5 1.5 1.5 31 31 A c T <5S+ 0 0 1 -4,-1.4 4,-0.4 1,-0.2 -1,-0.2 0.778 117.9 44.8 -74.5 -27.8 -6.1 1.1 -0.3 32 32 A N T 4 - 0 0 60 1,-0.1 3,-0.7 3,-0.0 -1,-0.3 -0.978 54.3-154.1-150.6 133.9 3.9 12.2 -1.4 43 43 A P T 3 S+ 0 0 103 0, 0.0 4,-0.3 0, 0.0 -1,-0.1 0.798 89.8 79.0 -75.1 -30.6 1.7 12.1 -4.5 44 44 A G T 3 S+ 0 0 82 2,-0.1 -29,-0.0 3,-0.0 0, 0.0 0.771 97.9 52.2 -46.9 -29.0 4.8 12.1 -6.7 45 45 A V S < S- 0 0 27 -3,-0.7 2,-1.6 1,-0.0 3,-0.1 -0.563 112.3 -80.2-105.5 171.3 4.9 8.4 -5.8 46 46 A P - 0 0 34 0, 0.0 -26,-0.2 0, 0.0 -25,-0.2 -0.565 38.0-158.6 -75.0 88.9 2.2 5.7 -6.0 47 47 A W S S+ 0 0 86 -2,-1.6 2,-0.7 -4,-0.3 -6,-0.1 0.845 87.2 51.6 -30.4 -55.6 0.3 6.5 -2.8 48 48 A c S S+ 0 0 3 -10,-0.2 -27,-2.1 -25,-0.2 -26,-1.0 -0.811 81.3 155.5 -92.4 113.9 -0.9 2.9 -3.0 49 49 A F B -A 37 0A 0 -12,-1.0 -12,-1.5 -2,-0.7 3,-0.1 -0.890 44.9 -85.7-135.3 164.9 2.0 0.5 -3.4 50 50 A K - 0 0 108 -2,-0.3 2,-0.4 -14,-0.2 -31,-0.2 -0.196 57.7 -85.8 -65.7 161.6 2.9 -3.1 -2.7 51 51 A P - 0 0 56 0, 0.0 -40,-0.2 0, 0.0 3,-0.2 -0.587 56.3 -93.6 -75.0 124.2 4.2 -4.1 0.8 52 52 A L - 0 0 46 -42,-3.4 2,-2.4 -2,-0.4 -34,-0.1 0.014 48.7 -97.1 -35.1 133.9 7.9 -3.6 1.1 53 53 A Q - 0 0 123 -3,-0.1 -1,-0.2 1,-0.1 -43,-0.0 -0.364 45.3-140.0 -61.6 80.4 9.6 -6.9 0.2 54 54 A E + 0 0 124 -2,-2.4 -1,-0.1 -3,-0.2 2,-0.1 -0.224 39.2 157.3 -48.0 117.4 10.0 -8.0 3.8 55 55 A A + 0 0 85 2,-0.0 2,-0.4 0, 0.0 -1,-0.1 -0.544 15.7 130.9-148.6 74.3 13.4 -9.6 4.1 56 56 A E + 0 0 173 -2,-0.1 2,-0.4 0, 0.0 -2,-0.0 -0.992 23.3 176.2-134.3 125.8 14.7 -9.6 7.6 57 57 A C + 0 0 128 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.964 18.6 146.8-132.7 114.2 16.1 -12.5 9.5 58 58 A T 0 0 147 -2,-0.4 -1,-0.1 0, 0.0 0, 0.0 0.695 360.0 360.0-112.4 -37.0 17.5 -12.0 13.0 59 59 A F 0 0 237 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.304 360.0 360.0 -56.3 360.0 16.7 -15.3 14.6