==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 09-FEB-07 2EBV . COMPND 2 MOLECULE: NUCLEAR PORE COMPLEX PROTEIN NUP153; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.P.ZHANG,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5308.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 10 17.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 131 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 137.7 19.0 -34.1 -22.8 2 2 A S - 0 0 130 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.996 360.0-162.4-135.1 136.7 18.7 -35.4 -19.3 3 3 A S + 0 0 132 -2,-0.4 3,-0.1 1,-0.1 5,-0.0 -0.721 44.0 102.7-113.6 164.6 16.6 -38.3 -17.8 4 4 A G + 0 0 73 1,-0.4 2,-0.3 -2,-0.2 -1,-0.1 0.606 67.2 70.5 130.6 40.1 15.6 -39.2 -14.3 5 5 A S S S- 0 0 98 0, 0.0 2,-0.7 0, 0.0 -1,-0.4 -0.960 83.8 -80.7-164.1 176.1 11.9 -38.3 -13.9 6 6 A S S S- 0 0 121 -2,-0.3 -3,-0.0 1,-0.1 0, 0.0 -0.816 95.3 -17.3 -95.6 111.2 8.3 -39.2 -14.8 7 7 A G S S- 0 0 53 -2,-0.7 2,-0.4 1,-0.1 -1,-0.1 0.573 95.0 -71.4 68.8 135.0 7.4 -37.8 -18.2 8 8 A S + 0 0 131 -3,-0.1 2,-0.5 1,-0.1 -1,-0.1 -0.423 57.1 178.2 -61.6 114.3 9.3 -35.0 -20.0 9 9 A S - 0 0 104 -2,-0.4 2,-0.2 2,-0.0 -1,-0.1 -0.898 14.7-153.8-126.1 102.4 8.6 -31.8 -18.1 10 10 A S - 0 0 121 -2,-0.5 2,-0.3 1,-0.0 -2,-0.0 -0.524 13.3-159.5 -75.9 137.7 10.4 -28.7 -19.3 11 11 A S - 0 0 97 -2,-0.2 4,-0.1 1,-0.1 -1,-0.0 -0.777 20.4-160.2-116.5 161.4 11.0 -26.0 -16.7 12 12 A C + 0 0 132 -2,-0.3 -1,-0.1 2,-0.1 3,-0.0 0.742 66.1 90.5-107.0 -37.9 11.6 -22.2 -16.9 13 13 A T S S- 0 0 107 1,-0.1 2,-0.6 5,-0.0 -2,-0.1 -0.236 86.9-104.9 -61.1 149.4 13.2 -21.5 -13.5 14 14 A V > - 0 0 86 3,-0.2 3,-0.8 1,-0.0 -1,-0.1 -0.681 34.9-133.8 -81.9 117.4 16.9 -21.8 -13.2 15 15 A T T 3 S+ 0 0 111 -2,-0.6 -1,-0.0 1,-0.2 -4,-0.0 -0.347 85.2 12.9 -69.2 149.3 17.9 -25.0 -11.3 16 16 A T T 3 S+ 0 0 142 -2,-0.0 -1,-0.2 1,-0.0 2,-0.1 0.870 126.2 62.0 52.0 40.0 20.5 -24.7 -8.6 17 17 A G < - 0 0 39 -3,-0.8 2,-0.4 2,-0.0 -3,-0.2 -0.345 62.6-166.8 167.5 106.3 20.2 -21.0 -8.6 18 18 A T - 0 0 133 -2,-0.1 2,-0.2 -5,-0.1 -3,-0.0 -0.848 10.5-172.4-107.3 140.8 17.2 -18.7 -7.9 19 19 A L - 0 0 132 -2,-0.4 2,-0.3 -5,-0.0 3,-0.2 -0.679 12.6-132.7-121.9 176.5 17.1 -15.0 -8.7 20 20 A G S S+ 0 0 64 -2,-0.2 -2,-0.0 1,-0.2 0, 0.0 -0.982 76.4 13.4-136.1 147.2 14.7 -12.1 -8.1 21 21 A F + 0 0 102 -2,-0.3 -1,-0.2 1,-0.1 4,-0.0 0.899 64.3 178.6 59.8 42.2 13.1 -9.3 -10.1 22 22 A G + 0 0 64 -3,-0.2 2,-0.2 2,-0.0 -1,-0.1 0.833 67.8 23.1 -42.6 -39.5 14.1 -11.1 -13.3 23 23 A D S S- 0 0 98 1,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.757 91.0 -97.4-125.1 172.0 12.4 -8.3 -15.2 24 24 A K - 0 0 176 -2,-0.2 2,-0.4 2,-0.0 -2,-0.0 -0.504 26.3-149.7 -88.6 159.4 11.4 -4.7 -14.6 25 25 A F - 0 0 90 -2,-0.2 2,-0.5 2,-0.0 8,-0.1 -0.950 14.4-131.7-135.7 114.6 8.0 -3.4 -13.4 26 26 A K + 0 0 216 -2,-0.4 -2,-0.0 1,-0.0 0, 0.0 -0.496 39.5 166.9 -66.4 114.1 6.6 -0.0 -14.4 27 27 A R - 0 0 127 -2,-0.5 -2,-0.0 6,-0.0 5,-0.0 -0.984 33.0-114.3-134.4 144.0 5.2 1.5 -11.1 28 28 A P - 0 0 71 0, 0.0 5,-0.2 0, 0.0 0, 0.0 -0.201 20.6-125.7 -69.7 163.6 4.1 5.1 -10.2 29 29 A I S S+ 0 0 176 3,-0.1 0, 0.0 1,-0.0 0, 0.0 0.978 103.3 32.9 -74.7 -60.8 5.9 7.3 -7.7 30 30 A G S S+ 0 0 57 2,-0.0 12,-0.0 12,-0.0 -1,-0.0 0.995 117.4 50.7 -59.3 -71.2 3.1 8.1 -5.3 31 31 A S S S- 0 0 45 1,-0.1 2,-0.4 11,-0.1 11,-0.2 0.076 83.3-126.0 -59.3 178.0 1.0 5.0 -5.5 32 32 A W - 0 0 23 9,-0.3 2,-0.7 7,-0.1 9,-0.5 -0.998 7.5-130.5-136.2 135.2 2.5 1.5 -5.0 33 33 A E - 0 0 52 -2,-0.4 7,-0.2 -5,-0.2 -6,-0.0 -0.744 30.4-127.7 -87.5 115.9 2.4 -1.6 -7.2 34 34 A C - 0 0 5 5,-1.4 -1,-0.1 -2,-0.7 21,-0.0 0.065 10.8-153.8 -52.1 169.7 1.3 -4.7 -5.2 35 35 A S S S+ 0 0 108 3,-0.1 -1,-0.1 2,-0.0 -2,-0.0 0.668 88.3 49.9-117.9 -37.5 3.4 -7.8 -5.3 36 36 A V S S+ 0 0 109 1,-0.1 -2,-0.0 3,-0.1 0, 0.0 0.895 139.7 4.1 -71.2 -41.6 1.0 -10.6 -4.6 37 37 A C S S- 0 0 42 2,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.573 89.4-137.1-116.5 -21.3 -1.6 -9.4 -7.2 38 38 A C + 0 0 61 1,-0.2 2,-0.3 -5,-0.0 -3,-0.1 0.916 49.3 152.5 62.0 44.7 0.4 -6.6 -8.7 39 39 A V - 0 0 47 1,-0.1 -5,-1.4 -7,-0.0 -1,-0.2 -0.828 52.1 -95.0-109.1 146.8 -2.7 -4.3 -8.7 40 40 A S + 0 0 102 -2,-0.3 9,-0.3 -7,-0.2 2,-0.3 -0.243 49.6 179.7 -57.1 141.2 -2.8 -0.5 -8.6 41 41 A N - 0 0 6 -9,-0.5 2,-0.5 7,-0.1 -9,-0.3 -0.827 30.5 -98.5-137.3 175.5 -3.2 0.9 -5.1 42 42 A N - 0 0 91 5,-0.4 3,-0.5 -2,-0.3 5,-0.2 -0.883 21.5-138.0-104.5 124.1 -3.5 4.2 -3.2 43 43 A A S S+ 0 0 50 -2,-0.5 -1,-0.1 1,-0.3 -12,-0.0 0.885 109.1 47.3 -40.9 -51.5 -0.5 5.6 -1.5 44 44 A E S S+ 0 0 172 -3,-0.1 2,-0.3 2,-0.1 -1,-0.3 0.888 93.1 92.0 -60.3 -40.5 -2.6 6.6 1.5 45 45 A D - 0 0 48 -3,-0.5 4,-0.1 1,-0.2 -3,-0.0 -0.413 63.6-160.6 -60.9 115.6 -4.3 3.2 1.5 46 46 A N S S+ 0 0 115 -2,-0.3 9,-2.3 8,-0.1 2,-0.3 0.203 74.3 40.6 -83.2 17.1 -2.2 1.0 3.9 47 47 A K B S-A 54 0A 120 7,-0.3 -5,-0.4 -5,-0.2 7,-0.2 -0.965 85.8-100.6-155.3 168.0 -3.7 -2.1 2.2 48 48 A C - 0 0 4 5,-1.0 -7,-0.1 -2,-0.3 -8,-0.1 -0.351 11.7-153.6 -89.0 172.5 -4.7 -3.5 -1.2 49 49 A V S S+ 0 0 84 -9,-0.3 -1,-0.1 -2,-0.1 -8,-0.1 0.628 92.2 47.0-116.8 -28.6 -8.1 -3.7 -2.8 50 50 A S S S+ 0 0 81 -10,-0.2 -9,-0.0 3,-0.1 -10,-0.0 0.871 138.7 7.0 -82.4 -40.9 -7.8 -6.7 -5.1 51 51 A C S S- 0 0 52 2,-0.1 -1,-0.1 -12,-0.1 -2,-0.1 0.543 92.3-132.5-115.3 -17.2 -6.1 -9.0 -2.6 52 52 A M + 0 0 134 1,-0.2 2,-0.4 -5,-0.0 -3,-0.1 0.928 46.8 162.5 62.9 46.6 -6.5 -6.8 0.5 53 53 A S - 0 0 32 1,-0.1 -5,-1.0 3,-0.0 -1,-0.2 -0.800 46.6 -97.6-101.8 140.8 -2.8 -7.3 1.5 54 54 A E B -A 47 0A 150 -2,-0.4 -7,-0.3 -7,-0.2 -1,-0.1 -0.260 46.5-106.3 -55.0 133.6 -1.0 -5.0 4.0 55 55 A K - 0 0 57 -9,-2.3 2,-0.2 1,-0.1 -1,-0.1 -0.396 36.3-111.2 -65.7 135.1 1.1 -2.4 2.2 56 56 A P 0 0 92 0, 0.0 -1,-0.1 0, 0.0 -9,-0.0 -0.450 360.0 360.0 -69.8 135.0 4.8 -3.1 2.3 57 57 A G 0 0 112 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 0.880 360.0 360.0 84.6 360.0 6.9 -0.7 4.4