==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 09-FEB-07 2EC3 . COMPND 2 MOLECULE: FIBRONECTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR R.SANO,F.HAYASHI,K.IZUMI,M.YOSHIDA,S.YOKOYAMA,RIKEN . 68 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6452.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 25 36.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 23.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-164.2 -3.4 15.6 -25.5 2 2 A S + 0 0 113 1,-0.2 0, 0.0 2,-0.1 0, 0.0 -0.860 360.0 45.4-143.6 176.8 -4.8 15.9 -22.0 3 3 A S + 0 0 112 -2,-0.3 -1,-0.2 1,-0.1 0, 0.0 0.904 64.4 151.1 50.7 46.2 -8.0 16.5 -20.0 4 4 A G + 0 0 80 -3,-0.1 2,-0.2 0, 0.0 -1,-0.1 0.975 56.7 39.2 -70.7 -56.9 -9.8 14.0 -22.3 5 5 A S + 0 0 116 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.483 66.6 167.6 -92.4 164.9 -12.4 12.8 -19.8 6 6 A S + 0 0 124 -2,-0.2 2,-0.1 0, 0.0 0, 0.0 -0.906 13.8 112.8-174.3 145.3 -14.4 14.8 -17.2 7 7 A G + 0 0 75 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.414 39.0 74.4 148.7 134.5 -17.3 14.5 -14.9 8 8 A G - 0 0 82 -2,-0.1 -1,-0.2 0, 0.0 2,-0.1 0.763 50.1-163.5 106.7 80.7 -18.2 14.3 -11.3 9 9 A S - 0 0 102 1,-0.0 2,-0.5 0, 0.0 3,-0.2 -0.229 26.3-112.8 -84.5 177.3 -17.9 17.5 -9.3 10 10 A G + 0 0 72 1,-0.2 -1,-0.0 -2,-0.1 0, 0.0 -0.563 51.9 148.1-113.8 68.1 -17.8 18.0 -5.5 11 11 A H + 0 0 154 -2,-0.5 -1,-0.2 2,-0.0 2,-0.1 0.934 64.0 57.4 -64.0 -47.8 -21.1 19.7 -4.6 12 12 A F S S- 0 0 195 -3,-0.2 2,-0.2 1,-0.0 0, 0.0 -0.454 71.4-148.8 -84.0 158.1 -21.3 18.0 -1.2 13 13 A R - 0 0 223 -2,-0.1 -1,-0.0 2,-0.0 -3,-0.0 -0.578 23.8-179.2-127.8 69.2 -18.6 18.2 1.5 14 14 A C - 0 0 108 -2,-0.2 2,-0.1 1,-0.1 0, 0.0 0.016 39.7-108.6 -59.8 173.3 -18.7 14.9 3.4 15 15 A D S S+ 0 0 140 1,-0.0 2,-0.8 2,-0.0 3,-0.3 -0.258 76.1 123.8-101.2 44.6 -16.4 14.3 6.4 16 16 A S + 0 0 67 1,-0.2 -2,-0.1 -2,-0.1 -1,-0.0 -0.818 18.1 120.2-110.0 92.8 -14.3 11.7 4.5 17 17 A S S S+ 0 0 65 -2,-0.8 34,-0.2 3,-0.0 -1,-0.2 0.615 78.2 41.1-120.3 -30.1 -10.6 12.9 4.6 18 18 A R S S+ 0 0 193 -3,-0.3 11,-0.5 35,-0.1 2,-0.3 -0.277 101.6 86.6-115.7 45.1 -8.9 10.0 6.4 19 19 A W - 0 0 109 33,-1.2 2,-0.3 9,-0.1 9,-0.1 -0.939 58.6-143.5-140.5 161.7 -10.7 7.1 4.7 20 20 A a B -A 27 0A 9 7,-1.1 7,-0.9 -2,-0.3 2,-0.3 -0.821 6.6-161.2-124.4 164.2 -10.5 4.9 1.6 21 21 A H + 0 0 130 32,-0.3 5,-0.1 -2,-0.3 -2,-0.0 -0.970 27.4 141.1-150.2 130.8 -12.9 3.4 -0.9 22 22 A D S S+ 0 0 56 3,-0.5 -1,-0.1 -2,-0.3 4,-0.1 0.569 87.0 5.7-130.6 -59.8 -12.6 0.5 -3.4 23 23 A N S S- 0 0 139 2,-0.2 3,-0.1 0, 0.0 -2,-0.0 -0.215 124.5 -66.3-126.2 41.9 -15.7 -1.7 -3.5 24 24 A G S S+ 0 0 59 1,-0.2 2,-0.4 0, 0.0 -3,-0.1 0.889 101.1 120.5 77.6 41.0 -18.0 0.2 -1.2 25 25 A V - 0 0 66 2,-0.0 2,-0.7 -5,-0.0 -3,-0.5 -0.998 60.5-130.7-141.0 135.1 -16.0 -0.3 2.0 26 26 A N - 0 0 113 -2,-0.4 2,-0.3 -5,-0.1 -5,-0.2 -0.749 28.9-169.1 -87.9 112.8 -14.5 2.1 4.4 27 27 A Y B -A 20 0A 21 -7,-0.9 -7,-1.1 -2,-0.7 2,-0.4 -0.789 16.9-128.1-104.0 145.6 -10.8 1.1 5.1 28 28 A K > - 0 0 128 -2,-0.3 3,-2.9 -9,-0.1 19,-0.3 -0.748 41.7 -86.8 -94.0 136.9 -8.7 2.6 7.9 29 29 A I T 3 S+ 0 0 95 -11,-0.5 19,-0.2 -2,-0.4 -1,-0.1 -0.114 118.9 15.5 -41.2 116.6 -5.2 3.9 7.1 30 30 A G T 3 S+ 0 0 31 17,-1.8 -1,-0.3 1,-0.3 18,-0.1 -0.149 96.6 122.9 107.6 -38.3 -2.9 0.9 7.2 31 31 A E < - 0 0 88 -3,-2.9 16,-1.2 15,-0.1 -1,-0.3 0.129 49.2-143.5 -48.5 172.3 -5.6 -1.7 7.2 32 32 A K E +B 46 0B 153 14,-0.2 2,-0.3 -3,-0.1 14,-0.2 -0.999 18.7 176.1-146.7 145.1 -5.5 -4.4 4.4 33 33 A W E -B 45 0B 21 12,-1.3 12,-1.7 -2,-0.3 2,-0.3 -0.868 28.5-104.2-140.7 173.2 -8.1 -6.3 2.4 34 34 A D E +B 44 0B 119 -2,-0.3 2,-0.3 10,-0.2 10,-0.2 -0.717 39.4 159.4-102.9 153.6 -8.4 -8.8 -0.5 35 35 A R E -B 43 0B 100 8,-1.1 8,-1.7 -2,-0.3 2,-0.3 -0.902 39.0 -80.2-156.0-178.0 -9.3 -8.1 -4.1 36 36 A Q E -B 42 0B 142 -2,-0.3 6,-0.2 6,-0.3 2,-0.2 -0.667 38.8-136.2 -95.9 150.8 -9.1 -9.5 -7.7 37 37 A G - 0 0 6 4,-2.5 -1,-0.0 -2,-0.3 6,-0.0 -0.496 26.5-104.5-100.7 172.3 -6.1 -9.2 -9.9 38 38 A E S S+ 0 0 197 -2,-0.2 -1,-0.1 1,-0.1 4,-0.0 0.892 122.4 32.9 -61.0 -41.1 -5.6 -8.3 -13.6 39 39 A N S S- 0 0 112 3,-0.0 -1,-0.1 2,-0.0 3,-0.0 0.955 127.7 -86.6 -80.0 -56.8 -5.1 -11.9 -14.5 40 40 A G S S+ 0 0 45 1,-0.1 -3,-0.2 2,-0.0 -2,-0.1 0.171 89.5 107.7 172.4 -30.7 -7.3 -13.6 -11.9 41 41 A Q S S- 0 0 88 -5,-0.2 -4,-2.5 1,-0.1 2,-0.3 0.077 74.2 -92.0 -59.2 178.2 -5.3 -14.2 -8.7 42 42 A M E -B 36 0B 93 -6,-0.2 18,-0.6 18,-0.1 2,-0.4 -0.742 34.6-155.1 -99.4 146.2 -6.0 -12.1 -5.6 43 43 A M E -BC 35 59B 32 -8,-1.7 -8,-1.1 -2,-0.3 2,-0.5 -0.940 9.2-136.2-122.6 143.7 -4.2 -8.9 -4.6 44 44 A S E -BC 34 58B 14 14,-1.6 14,-2.1 -2,-0.4 2,-0.4 -0.846 18.5-162.6-101.7 130.0 -3.7 -7.3 -1.2 45 45 A b E -BC 33 57B 0 -12,-1.7 -12,-1.3 -2,-0.5 2,-0.5 -0.864 4.5-159.2-112.6 145.6 -4.2 -3.6 -0.8 46 46 A T E -BC 32 56B 39 10,-1.9 10,-1.2 -2,-0.4 -14,-0.2 -0.952 20.3-128.3-128.5 113.5 -2.9 -1.4 2.1 47 47 A a E + C 0 55B 1 -16,-1.2 -17,-1.8 -2,-0.5 8,-0.2 -0.346 34.6 164.5 -59.5 129.4 -4.5 2.0 2.8 48 48 A L E - 0 0 72 6,-2.1 2,-0.8 -19,-0.2 7,-0.2 0.736 21.9-158.9-113.5 -47.4 -1.9 4.8 3.0 49 49 A G E >> + C 0 54B 5 5,-2.4 5,-2.8 1,-0.2 4,-0.7 -0.807 24.6 167.3 105.5 -95.6 -3.8 8.0 2.8 50 50 A N T 45S- 0 0 136 -2,-0.8 2,-0.4 1,-0.2 -1,-0.2 0.845 83.7 -23.1 45.2 38.8 -1.6 10.8 1.7 51 51 A G T 45S+ 0 0 53 -34,-0.2 -1,-0.2 1,-0.1 0, 0.0 -0.986 136.4 4.3 138.4-128.4 -4.7 12.9 1.1 52 52 A K T 45S- 0 0 166 -2,-0.4 -33,-1.2 -3,-0.1 -1,-0.1 0.917 127.2 -57.7 -61.4 -45.0 -8.3 11.7 0.5 53 53 A G T <5 - 0 0 5 -4,-0.7 -32,-0.3 -35,-0.2 -3,-0.2 0.270 67.7-177.2 163.6 47.7 -7.4 8.1 1.0 54 54 A E E < +C 49 0B 104 -5,-2.8 -5,-2.4 -7,-0.1 -6,-2.1 -0.062 10.5 172.3 -56.8 162.7 -4.7 6.9 -1.4 55 55 A F E -C 47 0B 58 -8,-0.2 2,-0.3 -7,-0.2 -8,-0.2 -0.982 20.0-140.5-166.7 164.8 -3.7 3.2 -1.3 56 56 A K E -C 46 0B 107 -10,-1.2 -10,-1.9 -2,-0.3 2,-0.3 -0.810 6.1-152.1-130.1 170.9 -1.6 0.6 -3.1 57 57 A b E +C 45 0B 41 -2,-0.3 -12,-0.2 -12,-0.2 -2,-0.0 -0.968 11.5 179.4-150.3 130.2 -1.8 -3.1 -4.0 58 58 A D E -C 44 0B 55 -14,-2.1 -14,-1.6 -2,-0.3 2,-0.3 -0.973 35.3-102.8-133.5 146.9 0.8 -5.8 -4.6 59 59 A P E -C 43 0B 82 0, 0.0 2,-0.4 0, 0.0 -16,-0.1 -0.499 34.8-141.9 -69.8 125.5 0.6 -9.5 -5.5 60 60 A H + 0 0 116 -18,-0.6 2,-0.3 -2,-0.3 -18,-0.1 -0.735 35.1 144.8 -92.2 135.8 1.2 -11.8 -2.5 61 61 A E - 0 0 153 -2,-0.4 2,-0.3 0, 0.0 0, 0.0 -0.984 54.8-116.8-162.4 161.9 3.2 -15.0 -2.9 62 62 A A + 0 0 96 -2,-0.3 2,-0.8 1,-0.1 -2,-0.0 -0.312 58.6 138.3-100.6 48.6 5.6 -17.3 -1.2 63 63 A T + 0 0 89 -2,-0.3 2,-0.6 2,-0.0 -1,-0.1 -0.209 30.9 127.5 -86.8 44.8 8.5 -16.8 -3.7 64 64 A C - 0 0 118 -2,-0.8 2,-0.1 0, 0.0 -2,-0.0 -0.911 47.6-149.6-108.3 119.4 11.0 -16.6 -0.9 65 65 A Y - 0 0 197 -2,-0.6 2,-0.3 1,-0.1 -2,-0.0 -0.311 17.8-113.0 -80.3 166.8 14.1 -18.9 -1.1 66 66 A D - 0 0 153 -2,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.743 25.9-155.8-102.9 150.5 16.0 -20.4 1.8 67 67 A D 0 0 165 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.728 360.0 360.0-119.4 169.5 19.5 -19.5 2.9 68 68 A G 0 0 119 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.757 360.0 360.0 126.7 360.0 22.3 -21.3 4.8