==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 13-FEB-07 2ECC . COMPND 2 MOLECULE: HOMEOBOX AND LEUCINE ZIPPER PROTEIN HOMEZ; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,Y.O.KAMATARI,N.TOCHIO,N.NAMEKI,K.MIYAMOTO,H.LI, . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6379.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 60.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 42.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 139 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 152.9 10.2 -12.7 15.4 2 2 A S - 0 0 108 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.984 360.0 -79.1-149.9 157.2 11.8 -13.8 12.2 3 3 A S - 0 0 85 -2,-0.3 2,-1.3 1,-0.2 -1,-0.1 0.127 57.0 -92.3 -47.1 170.6 15.1 -15.1 10.8 4 4 A G S S+ 0 0 84 2,-0.1 2,-0.8 1,-0.0 -1,-0.2 -0.320 76.6 137.4 -87.4 53.9 17.9 -12.6 10.2 5 5 A S - 0 0 90 -2,-1.3 2,-0.6 2,-0.0 -2,-0.0 -0.863 28.5-178.1-105.6 103.8 17.0 -12.0 6.6 6 6 A S + 0 0 129 -2,-0.8 2,-0.3 2,-0.0 -2,-0.1 -0.890 15.6 150.1-105.6 114.9 17.2 -8.3 5.7 7 7 A G + 0 0 40 -2,-0.6 -2,-0.0 1,-0.1 0, 0.0 -0.938 15.6 151.7-149.4 123.1 16.2 -7.5 2.1 8 8 A K + 0 0 162 -2,-0.3 2,-1.6 2,-0.1 -1,-0.1 0.125 30.0 134.8-133.2 17.3 14.7 -4.3 0.6 9 9 A R + 0 0 219 2,-0.0 2,-0.3 0, 0.0 -2,-0.0 -0.539 32.2 154.4 -73.9 88.9 16.0 -4.5 -2.9 10 10 A K - 0 0 45 -2,-1.6 2,-0.4 32,-0.0 -2,-0.1 -0.744 39.6-121.6-115.4 164.3 12.9 -3.7 -4.9 11 11 A T > - 0 0 64 -2,-0.3 4,-2.9 1,-0.1 5,-0.4 -0.867 22.9-119.8-109.3 140.3 12.2 -2.2 -8.3 12 12 A K H > S+ 0 0 175 -2,-0.4 4,-2.5 1,-0.2 5,-0.1 0.847 116.8 53.5 -40.1 -43.1 10.2 0.9 -9.0 13 13 A E H > S+ 0 0 152 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.965 111.4 42.4 -59.2 -55.9 7.9 -1.3 -11.1 14 14 A Q H >> S+ 0 0 38 -3,-0.2 4,-0.9 1,-0.2 3,-0.5 0.931 116.4 48.5 -57.2 -48.9 7.3 -3.8 -8.3 15 15 A L H >X S+ 0 0 45 -4,-2.9 4,-3.1 1,-0.2 3,-0.6 0.863 102.5 64.4 -60.4 -36.7 6.9 -1.1 -5.7 16 16 A A H 3X S+ 0 0 49 -4,-2.5 4,-1.3 -5,-0.4 -1,-0.2 0.891 101.0 49.9 -53.9 -42.9 4.5 0.7 -8.0 17 17 A I H - 0 0 146 -2,-0.3 4,-2.5 1,-0.1 3,-0.4 -0.398 30.5-103.0 -96.7 176.2 -4.5 -10.4 4.3 30 30 A R H > S+ 0 0 229 1,-0.2 4,-0.9 2,-0.2 -1,-0.1 0.709 123.3 53.5 -71.4 -20.0 -3.0 -13.8 3.6 31 31 A E H 4 S+ 0 0 157 2,-0.1 -1,-0.2 1,-0.1 4,-0.2 0.693 113.0 42.3 -86.4 -21.5 -5.6 -14.2 0.8 32 32 A D H >> S+ 0 0 53 -3,-0.4 4,-1.5 2,-0.1 3,-1.3 0.843 105.5 61.1 -90.9 -41.1 -4.6 -10.9 -0.8 33 33 A Y H 3X S+ 0 0 22 -4,-2.5 4,-2.1 1,-0.3 3,-0.4 0.929 94.0 63.9 -51.3 -51.5 -0.8 -11.2 -0.5 34 34 A Q H 3< S+ 0 0 106 -4,-0.9 -1,-0.3 1,-0.3 -2,-0.1 0.813 105.0 48.8 -43.0 -34.9 -0.7 -14.4 -2.6 35 35 A K H X> S+ 0 0 114 -3,-1.3 3,-2.4 -4,-0.2 4,-1.2 0.913 104.1 56.8 -73.7 -44.7 -2.0 -12.2 -5.4 36 36 A L H 3X>S+ 0 0 0 -4,-1.5 4,-3.3 -3,-0.4 5,-0.6 0.860 100.5 59.3 -54.8 -37.5 0.6 -9.4 -4.8 37 37 A E H 3<5S+ 0 0 67 -4,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.578 106.8 49.6 -68.8 -8.1 3.3 -12.1 -5.3 38 38 A Q H <45S+ 0 0 161 -3,-2.4 -1,-0.2 -5,-0.3 -2,-0.2 0.688 117.5 36.3-100.9 -26.2 1.8 -12.6 -8.7 39 39 A I H <5S+ 0 0 80 -4,-1.2 -2,-0.2 -3,-0.4 -3,-0.2 0.778 130.0 31.6 -95.2 -34.1 1.7 -9.0 -9.8 40 40 A T T <5S- 0 0 6 -4,-3.3 -3,-0.2 -5,-0.2 -2,-0.1 0.635 93.8-139.2 -96.8 -18.8 5.0 -7.9 -8.1 41 41 A G < + 0 0 53 -5,-0.6 -4,-0.2 1,-0.2 -3,-0.1 0.717 59.7 130.0 66.5 20.0 6.7 -11.2 -8.6 42 42 A L - 0 0 11 -6,-0.4 -1,-0.2 1,-0.1 -2,-0.2 -0.850 67.3 -92.1-110.2 144.0 8.1 -10.8 -5.1 43 43 A P >> - 0 0 69 0, 0.0 4,-1.5 0, 0.0 3,-0.9 -0.087 33.0-119.0 -48.9 145.6 8.1 -13.3 -2.2 44 44 A R H 3> S+ 0 0 136 1,-0.3 4,-3.2 2,-0.2 3,-0.4 0.904 116.4 53.4 -54.2 -44.4 5.1 -13.1 0.2 45 45 A P H 3> S+ 0 0 92 0, 0.0 4,-1.1 0, 0.0 -1,-0.3 0.767 106.6 53.4 -63.0 -26.4 7.5 -12.4 3.1 46 46 A E H <> S+ 0 0 55 -3,-0.9 4,-0.8 2,-0.1 -2,-0.2 0.791 115.6 38.6 -79.2 -29.7 9.0 -9.6 1.1 47 47 A I H X S+ 0 0 0 -4,-1.5 4,-2.0 -3,-0.4 5,-0.2 0.906 111.4 55.4 -85.5 -48.6 5.7 -7.9 0.5 48 48 A I H X S+ 0 0 76 -4,-3.2 4,-1.2 1,-0.2 -2,-0.1 0.920 111.5 45.2 -49.9 -50.7 4.1 -8.6 3.9 49 49 A Q H X S+ 0 0 123 -4,-1.1 4,-1.8 -5,-0.2 3,-0.4 0.902 106.2 61.6 -61.5 -42.8 7.0 -6.9 5.7 50 50 A W H X S+ 0 0 33 -4,-0.8 4,-2.7 1,-0.3 -1,-0.2 0.935 99.2 54.2 -48.7 -55.3 6.9 -4.0 3.2 51 51 A F H X S+ 0 0 4 -4,-2.0 4,-1.8 1,-0.2 -1,-0.3 0.876 106.0 55.4 -48.0 -42.6 3.4 -3.0 4.2 52 52 A G H X S+ 0 0 20 -4,-1.2 4,-1.2 -3,-0.4 3,-0.4 0.961 109.9 42.1 -56.8 -56.7 4.6 -2.8 7.8 53 53 A D H X S+ 0 0 111 -4,-1.8 4,-1.7 1,-0.2 3,-0.2 0.890 107.8 62.8 -58.3 -41.4 7.4 -0.4 7.1 54 54 A T H X S+ 0 0 8 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.896 99.5 54.3 -50.8 -45.1 5.1 1.6 4.8 55 55 A R H X S+ 0 0 80 -4,-1.8 4,-3.0 -3,-0.4 -1,-0.2 0.918 104.6 55.3 -56.6 -46.4 2.8 2.4 7.8 56 56 A Y H X S+ 0 0 115 -4,-1.2 4,-2.0 -3,-0.2 5,-0.3 0.970 109.8 43.0 -50.7 -66.7 5.7 3.8 9.8 57 57 A A H X>S+ 0 0 9 -4,-1.7 4,-2.4 1,-0.2 5,-1.9 0.922 115.0 51.3 -45.9 -55.2 6.8 6.4 7.2 58 58 A L H ><5S+ 0 0 36 -4,-2.3 3,-0.6 3,-0.3 -1,-0.2 0.947 105.9 53.4 -48.4 -59.5 3.2 7.4 6.5 59 59 A K H 3<5S+ 0 0 158 -4,-3.0 -1,-0.3 1,-0.3 -2,-0.2 0.858 116.2 40.8 -44.8 -41.5 2.4 7.9 10.2 60 60 A H H 3<5S- 0 0 111 -4,-2.0 -1,-0.3 -3,-0.4 -2,-0.2 0.755 122.8-109.2 -79.9 -26.1 5.4 10.2 10.4 61 61 A G T <<5S+ 0 0 34 -4,-2.4 -3,-0.3 -3,-0.6 -2,-0.1 0.815 77.8 127.6 99.5 40.2 4.6 11.7 7.0 62 62 A Q < + 0 0 122 -5,-1.9 -4,-0.2 -8,-0.2 -5,-0.1 0.876 41.6 95.8 -91.3 -47.4 7.4 10.3 4.8 63 63 A L - 0 0 20 -9,-0.2 -9,-0.0 1,-0.2 0, 0.0 -0.138 49.7-171.6 -46.9 134.5 5.3 8.8 1.9 64 64 A K S S+ 0 0 162 1,-0.1 -1,-0.2 4,-0.0 -2,-0.0 0.594 83.7 50.1-104.8 -17.9 5.0 11.3 -1.0 65 65 A W S > S+ 0 0 39 2,-0.0 3,-0.9 0, 0.0 2,-0.1 0.737 95.4 85.4 -90.8 -27.1 2.5 9.3 -3.0 66 66 A F T 3 S+ 0 0 36 1,-0.3 -47,-0.0 2,-0.1 -44,-0.0 -0.384 104.0 1.8 -75.0 153.8 0.1 8.8 -0.1 67 67 A R T 3 S+ 0 0 161 1,-0.2 -1,-0.3 -2,-0.1 -2,-0.0 0.823 93.2 130.5 36.0 42.1 -2.5 11.4 0.8 68 68 A D < + 0 0 98 -3,-0.9 -1,-0.2 0, 0.0 -2,-0.1 -0.185 32.3 168.9-113.9 38.7 -1.1 13.3 -2.2 69 69 A N - 0 0 137 1,-0.1 3,-0.1 3,-0.0 -3,-0.0 0.040 17.6-175.7 -46.8 160.4 -4.5 14.1 -3.9 70 70 A A + 0 0 109 1,-0.4 2,-0.2 0, 0.0 -1,-0.1 0.595 62.0 33.1-129.2 -42.6 -4.5 16.5 -6.8 71 71 A S S S- 0 0 102 0, 0.0 -1,-0.4 0, 0.0 0, 0.0 -0.730 73.9-120.0-117.3 167.3 -8.1 17.0 -7.8 72 72 A G - 0 0 66 -2,-0.2 -3,-0.0 -3,-0.1 0, 0.0 -0.726 36.1-174.1-111.7 83.5 -11.5 17.0 -6.0 73 73 A P + 0 0 118 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.173 11.1 155.9 -69.7 166.2 -13.6 14.3 -7.5 74 74 A S - 0 0 122 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.972 29.4-127.6-174.0 178.9 -17.3 13.7 -6.5 75 75 A S 0 0 112 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.993 360.0 360.0-149.4 139.0 -20.6 12.2 -7.6 76 76 A G 0 0 134 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.389 360.0 360.0 -77.1 360.0 -24.2 13.5 -7.8