==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 13-FEB-07 2ECL . COMPND 2 MOLECULE: RING-BOX PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.MIYAMOTO,T.TOMIZAWA,S.KOSHIBA,S.WATANABE,T.HARADA, . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6493.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 50.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 17.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 14.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 128.2 -13.3 -35.7 25.6 2 2 A S - 0 0 121 1,-0.1 2,-0.2 0, 0.0 0, 0.0 -0.062 360.0 -94.6 -65.5 172.3 -10.9 -32.8 25.4 3 3 A S - 0 0 111 1,-0.2 -1,-0.1 0, 0.0 0, 0.0 -0.501 36.5-112.2 -89.3 159.9 -10.1 -31.0 22.2 4 4 A G - 0 0 74 -2,-0.2 2,-0.3 1,-0.1 -1,-0.2 0.380 45.3 -75.0 -68.3-150.9 -7.2 -31.7 19.9 5 5 A S + 0 0 122 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.880 45.5 177.9-117.3 148.7 -4.2 -29.5 19.3 6 6 A S + 0 0 119 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.834 25.3 107.0-138.8 175.7 -3.9 -26.3 17.3 7 7 A G - 0 0 65 -2,-0.3 2,-0.6 1,-0.1 -2,-0.0 0.496 37.2-153.6 113.5 103.4 -1.4 -23.6 16.3 8 8 A M - 0 0 173 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.918 15.5-142.2-110.4 115.4 0.2 -23.1 12.9 9 9 A W - 0 0 233 -2,-0.6 2,-0.2 1,-0.1 -2,-0.0 -0.185 15.6-134.6 -68.0 164.5 3.6 -21.4 12.9 10 10 A S - 0 0 116 2,-0.0 2,-0.2 3,-0.0 -1,-0.1 -0.751 11.2-149.2-119.4 167.0 4.6 -19.0 10.1 11 11 A W - 0 0 179 -2,-0.2 3,-0.3 0, 0.0 -1,-0.0 -0.581 27.8-109.4-123.5-173.5 7.7 -18.5 8.0 12 12 A D S S+ 0 0 152 -2,-0.2 -2,-0.0 1,-0.2 0, 0.0 -0.190 70.8 123.8-113.3 39.1 9.6 -15.6 6.3 13 13 A V + 0 0 106 1,-0.1 2,-0.8 2,-0.0 -1,-0.2 0.752 53.5 88.0 -69.5 -24.0 8.7 -16.6 2.7 14 14 A E + 0 0 136 -3,-0.3 2,-0.2 3,-0.0 3,-0.2 -0.685 59.6 150.0 -81.8 109.2 7.2 -13.1 2.2 15 15 A C + 0 0 89 -2,-0.8 -2,-0.0 1,-0.2 -3,-0.0 -0.754 39.8 47.1-130.9 177.4 10.0 -10.8 1.0 16 16 A D S S+ 0 0 103 -2,-0.2 2,-0.4 1,-0.2 9,-0.3 0.944 73.4 161.7 53.0 54.0 10.5 -7.7 -1.1 17 17 A T - 0 0 32 -3,-0.2 2,-0.2 7,-0.1 -1,-0.2 -0.883 52.1 -94.5-109.7 137.3 7.5 -5.9 0.5 18 18 A C B >> -A 23 0A 0 5,-1.2 4,-2.3 -2,-0.4 5,-0.9 -0.250 35.1-167.9 -49.4 107.5 7.0 -2.2 0.4 19 19 A A T 45S+ 0 0 26 -2,-0.2 -1,-0.2 1,-0.2 33,-0.1 0.788 79.0 73.0 -70.5 -28.0 8.6 -1.0 3.6 20 20 A I T 45S+ 0 0 47 1,-0.2 -1,-0.2 3,-0.1 -2,-0.1 0.914 126.7 2.0 -51.9 -48.1 6.9 2.4 3.2 21 21 A C T 45S- 0 0 33 -3,-0.3 -1,-0.2 2,-0.2 -2,-0.2 0.450 97.3-123.6-117.7 -8.8 3.5 1.0 4.1 22 22 A R T <5 + 0 0 186 -4,-2.3 2,-0.3 1,-0.2 -3,-0.2 0.878 66.6 133.8 65.7 38.6 4.6 -2.6 4.8 23 23 A V B - 0 0 62 -2,-0.3 3,-2.2 1,-0.2 -7,-0.1 -0.227 36.7-147.2 -47.8 102.8 2.6 -6.5 -0.6 25 25 A V T 3 S+ 0 0 8 -2,-0.3 -1,-0.2 -9,-0.3 27,-0.1 0.784 99.1 60.9 -44.5 -30.0 4.1 -4.3 -3.3 26 26 A M T 3 S+ 0 0 94 2,-0.1 -1,-0.3 25,-0.1 2,-0.1 0.870 108.1 46.7 -67.3 -37.6 2.2 -6.6 -5.6 27 27 A D S < S- 0 0 91 -3,-2.2 -4,-0.1 1,-0.1 2,-0.1 -0.445 103.8 -78.0 -99.2 174.9 -1.1 -5.6 -4.1 28 28 A A - 0 0 8 -2,-0.1 -1,-0.1 1,-0.1 -4,-0.1 -0.368 49.6-110.5 -72.4 152.0 -2.5 -2.2 -3.3 29 29 A C >> - 0 0 1 -6,-0.1 4,-3.3 1,-0.1 3,-0.5 -0.176 33.3 -97.6 -75.4 173.1 -1.4 -0.4 -0.1 30 30 A L T 34 S+ 0 0 121 1,-0.2 4,-0.5 2,-0.2 -1,-0.1 0.654 127.2 53.2 -66.1 -14.2 -3.5 0.2 3.0 31 31 A R T 3> S+ 0 0 187 2,-0.1 4,-0.7 3,-0.1 -1,-0.2 0.746 115.8 36.2 -90.7 -28.2 -4.2 3.7 1.5 32 32 A C H <>>S+ 0 0 12 -3,-0.5 5,-2.6 2,-0.2 4,-1.2 0.780 112.4 57.8 -92.9 -33.1 -5.3 2.4 -1.9 33 33 A Q H <5S+ 0 0 99 -4,-3.3 -3,-0.2 3,-0.2 -2,-0.1 0.823 111.0 44.3 -66.6 -31.7 -7.2 -0.7 -0.6 34 34 A A H 45S+ 0 0 88 -4,-0.5 -1,-0.2 -5,-0.3 -2,-0.2 0.846 119.4 40.4 -80.6 -36.8 -9.3 1.5 1.6 35 35 A E H <5S- 0 0 139 -4,-0.7 -2,-0.2 -5,-0.0 -1,-0.2 0.535 109.4-123.7 -87.8 -8.1 -10.0 4.2 -1.1 36 36 A N T <5 + 0 0 117 -4,-1.2 -3,-0.2 1,-0.1 3,-0.2 0.910 69.8 133.2 66.0 43.5 -10.3 1.5 -3.8 37 37 A K >>< + 0 0 110 -5,-2.6 4,-1.9 1,-0.1 3,-1.8 0.049 20.8 123.6-110.6 23.2 -7.6 3.0 -5.9 38 38 A Q T 34 + 0 0 63 -6,-0.5 3,-0.4 1,-0.3 -1,-0.1 0.939 65.3 64.3 -47.1 -58.8 -5.8 -0.3 -6.5 39 39 A E T 34 S+ 0 0 193 1,-0.3 -1,-0.3 -3,-0.2 -2,-0.1 0.774 111.7 40.1 -37.1 -31.5 -6.1 0.0 -10.3 40 40 A D T <4 S+ 0 0 95 -3,-1.8 2,-1.6 1,-0.1 -1,-0.3 0.839 92.2 90.9 -88.2 -38.9 -3.8 3.0 -9.7 41 41 A C < + 0 0 3 -4,-1.9 2,-0.1 -3,-0.4 -1,-0.1 -0.398 63.0 166.9 -62.2 88.4 -1.6 1.5 -7.1 42 42 A V - 0 0 34 -2,-1.6 12,-1.5 -14,-0.0 2,-0.5 -0.417 37.8 -99.4 -99.1 176.9 1.1 0.1 -9.4 43 43 A V E -BC 53 80B 2 37,-0.8 37,-2.7 10,-0.2 2,-0.6 -0.857 28.0-162.0-103.3 131.0 4.5 -1.3 -8.8 44 44 A V E -BC 52 79B 4 8,-3.0 8,-1.5 -2,-0.5 2,-0.2 -0.932 7.2-155.8-116.1 112.1 7.6 0.9 -9.3 45 45 A W E -BC 51 78B 76 33,-2.5 32,-1.7 -2,-0.6 33,-1.4 -0.599 10.1-149.9 -85.7 144.8 11.0 -0.9 -9.7 46 46 A G E > - C 0 76B 0 4,-0.9 3,-2.4 -2,-0.2 4,-0.4 -0.728 29.6-108.0-113.2 163.7 14.2 0.9 -8.8 47 47 A E T 3 S+ 0 0 110 28,-1.6 29,-0.1 1,-0.3 27,-0.1 0.777 119.3 64.6 -57.2 -26.6 17.8 0.7 -10.1 48 48 A C T 3 S- 0 0 31 2,-0.2 -1,-0.3 27,-0.1 3,-0.1 0.350 121.6-109.6 -79.1 7.5 18.6 -0.9 -6.7 49 49 A N S < S+ 0 0 128 -3,-2.4 2,-0.4 1,-0.2 -2,-0.2 0.928 75.6 135.3 64.3 46.7 16.3 -3.8 -7.8 50 50 A H - 0 0 46 -4,-0.4 -4,-0.9 -6,-0.0 2,-0.3 -0.972 45.4-146.0-132.1 119.2 13.6 -2.9 -5.2 51 51 A S E +B 45 0B 16 -2,-0.4 2,-0.2 -6,-0.2 -6,-0.2 -0.598 27.0 165.4 -83.9 141.7 9.9 -2.8 -6.0 52 52 A F E -B 44 0B 0 -8,-1.5 -8,-3.0 -2,-0.3 2,-0.8 -0.839 43.8 -80.5-143.6 179.7 7.7 -0.2 -4.3 53 53 A H E >> -B 43 0B 0 -2,-0.2 4,-1.8 -10,-0.2 3,-0.5 -0.794 29.3-144.6 -93.1 108.3 4.3 1.5 -4.5 54 54 A N H 3> S+ 0 0 47 -12,-1.5 4,-1.2 -2,-0.8 -1,-0.2 0.798 105.7 48.3 -37.0 -35.8 4.3 4.2 -7.1 55 55 A C H 3> S+ 0 0 22 -13,-0.4 4,-1.1 2,-0.2 -1,-0.3 0.930 115.2 42.0 -73.7 -47.7 1.9 6.0 -4.7 56 56 A C H X> S+ 0 0 8 -3,-0.5 4,-2.6 2,-0.2 3,-1.8 0.992 112.1 51.7 -62.6 -64.4 4.1 5.4 -1.6 57 57 A M H 3X S+ 0 0 9 -4,-1.8 4,-3.2 1,-0.3 5,-0.3 0.884 106.9 55.0 -38.1 -55.2 7.5 6.2 -3.1 58 58 A S H 3< S+ 0 0 60 -4,-1.2 4,-0.4 -5,-0.4 -1,-0.3 0.849 115.4 39.6 -49.8 -37.4 6.1 9.5 -4.5 59 59 A L H << S+ 0 0 88 -3,-1.8 4,-0.4 -4,-1.1 -1,-0.3 0.747 113.6 55.7 -84.3 -26.2 5.1 10.3 -0.9 60 60 A W H >X S+ 0 0 62 -4,-2.6 4,-3.3 1,-0.2 3,-2.2 0.935 100.6 55.9 -71.2 -48.0 8.3 8.8 0.5 61 61 A V T 3< S+ 0 0 32 -4,-3.2 4,-0.3 1,-0.3 -1,-0.2 0.769 92.6 74.7 -55.7 -25.6 10.7 10.9 -1.5 62 62 A K T 34 S+ 0 0 149 -4,-0.4 -1,-0.3 -5,-0.3 -2,-0.2 0.819 118.0 14.4 -57.4 -31.4 8.8 13.9 -0.1 63 63 A Q T <4 S+ 0 0 157 -3,-2.2 2,-0.4 -4,-0.4 -2,-0.2 0.746 143.4 22.1-110.6 -43.4 10.7 13.2 3.2 64 64 A N < - 0 0 71 -4,-3.3 2,-1.6 -5,-0.1 -1,-0.2 -0.881 57.5-165.6-134.0 102.3 13.5 10.8 2.2 65 65 A N + 0 0 109 -2,-0.4 9,-0.7 -4,-0.3 2,-0.3 -0.180 67.0 89.7 -78.8 45.7 14.6 10.7 -1.4 66 66 A R B S-D 73 0C 160 -2,-1.6 5,-0.2 7,-0.2 7,-0.2 -0.984 91.8 -92.8-147.0 132.1 16.4 7.5 -0.7 67 67 A C > - 0 0 1 5,-1.8 4,-2.5 -2,-0.3 5,-0.1 -0.127 29.5-140.3 -43.8 122.7 15.3 3.8 -0.9 68 68 A P T 4 S+ 0 0 33 0, 0.0 -1,-0.2 0, 0.0 -3,-0.0 0.385 101.0 48.9 -69.8 6.3 14.1 2.9 2.5 69 69 A L T 4 S+ 0 0 73 3,-0.1 -2,-0.1 -19,-0.0 0, 0.0 0.739 132.4 9.0-111.7 -43.7 15.8 -0.5 1.9 70 70 A C T 4 S- 0 0 25 2,-0.1 -3,-0.1 -20,-0.0 3,-0.1 0.177 85.6-134.9-123.6 13.2 19.3 0.5 0.7 71 71 A Q < + 0 0 134 -4,-2.5 2,-0.3 -5,-0.2 -6,-0.0 0.792 59.2 144.9 33.5 38.2 19.1 4.2 1.4 72 72 A Q - 0 0 121 -5,-0.1 -5,-1.8 1,-0.1 2,-0.2 -0.739 67.6 -71.3-105.0 153.5 20.6 4.5 -2.1 73 73 A D B -D 66 0C 135 -2,-0.3 -7,-0.2 -7,-0.2 2,-0.2 -0.153 58.7-129.9 -43.1 99.6 19.9 7.2 -4.7 74 74 A W - 0 0 27 -9,-0.7 2,-0.4 -2,-0.2 -1,-0.1 -0.377 31.6-179.8 -60.0 124.3 16.4 6.2 -5.7 75 75 A V - 0 0 64 -2,-0.2 -28,-1.6 -3,-0.1 2,-0.5 -0.866 29.1-130.7-133.9 100.3 16.2 5.9 -9.5 76 76 A V E +C 46 0B 72 -2,-0.4 -30,-0.2 -30,-0.2 3,-0.1 -0.269 31.7 175.0 -50.7 100.0 12.8 4.9 -11.0 77 77 A Q E - 0 0 78 -32,-1.7 2,-0.3 -2,-0.5 -31,-0.2 0.964 60.9 -18.4 -74.7 -55.9 14.0 2.1 -13.3 78 78 A R E -C 45 0B 155 -33,-1.4 -33,-2.5 2,-0.1 2,-0.4 -0.992 57.0-145.4-153.3 153.8 10.6 1.0 -14.6 79 79 A I E +C 44 0B 109 -2,-0.3 2,-0.3 -35,-0.2 -35,-0.2 -0.950 43.4 85.9-125.4 144.3 6.9 1.2 -13.6 80 80 A G E C 43 0B 23 -37,-2.7 -37,-0.8 -2,-0.4 -26,-0.1 -0.878 360.0 360.0 153.8 175.0 4.1 -1.3 -14.1 81 81 A K 0 0 157 -2,-0.3 -1,-0.1 -39,-0.2 -37,-0.1 0.713 360.0 360.0 -62.8 360.0 2.2 -4.3 -12.6