==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOPTOSIS 14-FEB-07 2ECY . COMPND 2 MOLECULE: TNF RECEPTOR-ASSOCIATED FACTOR 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.ABE,K.MIYAMOTO,N.TOCHIO,M.YONEYAMA,T.KIGAWA,S.YOKOYAMA, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5386.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 43.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 141 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 39.4 -44.6 13.6 -17.0 2 2 A S + 0 0 117 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.953 360.0 115.7-140.7 118.0 -40.9 14.0 -16.4 3 3 A S - 0 0 120 -2,-0.4 0, 0.0 0, 0.0 0, 0.0 -0.927 61.4 -80.2-175.0 150.5 -39.2 14.1 -13.0 4 4 A G + 0 0 65 -2,-0.3 3,-0.1 1,-0.1 4,-0.1 0.023 35.8 172.0 -52.1 164.9 -36.7 12.2 -10.9 5 5 A S + 0 0 113 1,-0.2 2,-1.0 2,-0.2 -1,-0.1 0.446 56.8 76.9-145.1 -37.9 -37.7 9.0 -9.0 6 6 A S S S- 0 0 119 1,-0.0 3,-0.3 3,-0.0 -1,-0.2 -0.740 109.9 -58.2 -89.0 102.2 -34.6 7.4 -7.6 7 7 A G - 0 0 50 -2,-1.0 -2,-0.2 1,-0.2 -1,-0.0 0.199 54.8-104.8 50.8 178.8 -33.6 9.4 -4.5 8 8 A F S S+ 0 0 207 -4,-0.1 2,-0.5 -3,-0.1 -1,-0.2 -0.074 77.7 115.0-130.1 32.2 -32.9 13.1 -4.7 9 9 A V - 0 0 106 -3,-0.3 2,-0.4 4,-0.0 4,-0.0 -0.911 47.1-157.7-109.9 128.9 -29.1 13.0 -4.4 10 10 A K + 0 0 175 -2,-0.5 -2,-0.0 2,-0.1 -3,-0.0 -0.850 56.5 0.1-106.8 139.8 -26.8 14.2 -7.2 11 11 A T S S- 0 0 117 -2,-0.4 2,-0.6 1,-0.1 0, 0.0 0.295 106.0 -50.7 67.5 157.8 -23.2 13.1 -7.6 12 12 A V - 0 0 122 1,-0.1 2,-0.6 2,-0.0 -1,-0.1 -0.503 53.7-173.7 -67.1 111.9 -21.3 10.8 -5.3 13 13 A E + 0 0 155 -2,-0.6 2,-0.3 -4,-0.0 -1,-0.1 -0.558 53.5 68.4-107.6 66.4 -21.8 12.1 -1.8 14 14 A D + 0 0 124 -2,-0.6 2,-0.2 2,-0.0 -2,-0.0 -0.910 47.6 168.8-175.8 148.2 -19.5 9.8 0.2 15 15 A K - 0 0 123 -2,-0.3 2,-0.2 12,-0.0 11,-0.2 -0.851 26.9-105.9-151.4-174.7 -15.9 9.0 0.8 16 16 A Y E -A 25 0A 99 9,-3.1 9,-1.7 -2,-0.2 2,-0.3 -0.684 20.0-155.5-118.4 172.8 -13.4 7.1 3.0 17 17 A K E -A 24 0A 99 7,-0.3 19,-0.3 -2,-0.2 7,-0.3 -0.989 27.1-102.7-152.3 140.8 -10.9 8.1 5.7 18 18 A C > - 0 0 0 5,-2.1 4,-0.9 -2,-0.3 19,-0.3 -0.348 22.9-136.0 -63.4 139.6 -7.7 6.5 7.1 19 19 A E T 4 S+ 0 0 68 17,-2.7 -1,-0.1 2,-0.1 18,-0.1 0.076 100.5 40.2 -84.4 25.3 -8.2 4.8 10.5 20 20 A K T 4 S+ 0 0 81 3,-0.1 -1,-0.1 16,-0.1 17,-0.1 0.533 130.1 15.6-132.6 -63.0 -4.9 6.4 11.6 21 21 A C T 4 S- 0 0 48 2,-0.1 3,-0.2 0, 0.0 -2,-0.1 0.344 94.6-123.1-100.4 3.8 -4.6 10.0 10.5 22 22 A H < + 0 0 129 -4,-0.9 2,-0.6 1,-0.2 -3,-0.1 0.769 48.3 173.3 59.4 25.3 -8.3 10.3 9.5 23 23 A L - 0 0 94 -6,-0.1 -5,-2.1 1,-0.1 2,-0.5 -0.539 31.6-129.6 -70.0 114.7 -7.1 11.2 6.0 24 24 A V E +A 17 0A 89 -2,-0.6 -7,-0.3 -7,-0.3 2,-0.3 -0.523 38.1 172.2 -69.2 117.6 -10.2 11.4 3.8 25 25 A L E -A 16 0A 34 -9,-1.7 -9,-3.1 -2,-0.5 13,-0.0 -0.816 36.8-144.9-124.6 165.4 -9.5 9.4 0.7 26 26 A C S S+ 0 0 99 -2,-0.3 -1,-0.1 1,-0.2 -9,-0.1 0.807 97.4 25.7 -96.4 -39.0 -11.6 8.2 -2.3 27 27 A S S S+ 0 0 97 -11,-0.1 -1,-0.2 -12,-0.0 -12,-0.0 -0.698 80.4 172.3-130.2 80.4 -10.0 4.8 -2.8 28 28 A P - 0 0 9 0, 0.0 10,-0.1 0, 0.0 8,-0.1 0.209 43.5-100.6 -69.8-163.8 -8.5 3.5 0.4 29 29 A K - 0 0 71 8,-0.8 9,-0.1 37,-0.1 6,-0.0 -0.401 36.7-158.3-122.4 54.6 -7.1 0.0 1.1 30 30 A Q - 0 0 79 35,-0.1 36,-1.1 6,-0.1 6,-0.2 -0.038 15.0-148.8 -36.3 116.1 -9.9 -1.7 2.9 31 31 A T - 0 0 10 4,-1.2 29,-0.2 34,-0.2 35,-0.1 0.328 35.1 -80.2 -71.5-152.7 -8.2 -4.6 4.8 32 32 A E S S+ 0 0 137 27,-1.5 28,-0.1 20,-0.3 -1,-0.1 0.207 127.1 51.4-100.0 13.5 -9.8 -7.9 5.6 33 33 A C S S- 0 0 47 2,-0.2 -1,-0.1 26,-0.2 3,-0.1 0.628 113.4-105.9-117.8 -29.8 -11.7 -6.5 8.6 34 34 A G S S+ 0 0 18 1,-0.4 -4,-0.0 0, 0.0 -2,-0.0 -0.295 80.3 111.1 133.0 -51.3 -13.4 -3.5 7.0 35 35 A H - 0 0 60 -5,-0.1 -4,-1.2 1,-0.1 -1,-0.4 0.159 54.9-139.9 -46.5 173.6 -11.5 -0.4 8.3 36 36 A R - 0 0 66 -19,-0.3 -17,-2.7 -6,-0.2 2,-0.3 -0.966 15.7-170.3-142.0 157.0 -9.4 1.6 5.9 37 37 A F - 0 0 0 -19,-0.3 -8,-0.8 -2,-0.3 2,-0.2 -0.886 25.6-101.0-141.2 171.1 -6.1 3.4 5.8 38 38 A C > - 0 0 12 -2,-0.3 4,-3.3 -10,-0.1 5,-0.3 -0.556 41.6 -99.4 -94.3 160.6 -4.0 5.8 3.7 39 39 A E H > S+ 0 0 158 -2,-0.2 4,-2.5 3,-0.2 5,-0.2 0.881 122.2 44.5 -41.6 -49.4 -1.2 4.9 1.4 40 40 A S H >> S+ 0 0 92 2,-0.2 4,-2.0 1,-0.2 3,-0.8 0.981 116.9 37.8 -60.3 -85.5 1.3 6.0 4.1 41 41 A C H 3> S+ 0 0 25 1,-0.3 4,-2.6 2,-0.2 5,-0.2 0.827 117.4 57.0 -34.3 -45.1 -0.1 4.4 7.3 42 42 A M H 3X S+ 0 0 4 -4,-3.3 4,-2.3 1,-0.2 -1,-0.3 0.957 106.8 45.2 -54.6 -56.2 -1.0 1.4 5.1 43 43 A A H < S+ 0 0 28 -4,-2.6 3,-2.3 1,-0.2 -2,-0.2 0.949 111.9 54.8 -56.1 -53.1 1.5 -1.4 9.1 46 46 A L H >< S+ 0 0 47 -4,-2.3 3,-0.7 1,-0.3 -1,-0.2 0.811 103.0 59.0 -51.2 -31.4 2.2 -3.9 6.2 47 47 A S T 3< S+ 0 0 104 -4,-0.9 -1,-0.3 -3,-0.4 -2,-0.2 0.094 85.0 83.7 -86.8 23.7 5.9 -3.2 7.0 48 48 A S T < S- 0 0 79 -3,-2.3 2,-3.0 1,-0.1 -1,-0.2 0.184 95.4-128.7-109.2 13.9 5.3 -4.5 10.5 49 49 A S S < S+ 0 0 117 -3,-0.7 -1,-0.1 1,-0.1 -4,-0.0 -0.353 102.1 45.2 73.0 -64.6 5.7 -8.2 9.6 50 50 A S S S- 0 0 88 -2,-3.0 2,-0.3 -3,-0.1 -1,-0.1 -0.573 80.9-177.6-110.6 67.4 2.4 -9.0 11.3 51 51 A P + 0 0 22 0, 0.0 9,-2.4 0, 0.0 -5,-0.1 -0.508 15.0 155.6 -69.7 123.1 0.1 -6.2 10.1 52 52 A K - 0 0 104 -2,-0.3 7,-1.8 7,-0.3 6,-0.4 0.759 57.1 -75.5-110.3 -70.9 -3.4 -6.5 11.6 53 53 A C > - 0 0 1 5,-0.2 4,-1.2 4,-0.2 3,-0.1 -0.147 20.2-136.9 159.7 98.1 -5.2 -3.1 11.6 54 54 A T T 4 S+ 0 0 52 1,-0.2 -34,-0.0 2,-0.2 -1,-0.0 0.799 105.7 61.0 -33.0 -40.7 -4.5 -0.2 14.0 55 55 A A T 4 S- 0 0 35 1,-0.1 -1,-0.2 -3,-0.1 -2,-0.1 0.983 141.0 -26.5 -53.0 -76.5 -8.3 0.1 14.1 56 56 A C T 4 S- 0 0 67 -4,-0.1 -2,-0.2 -3,-0.1 -3,-0.1 0.636 89.5-118.7-114.0 -27.5 -9.2 -3.4 15.6 57 57 A Q < + 0 0 106 -4,-1.2 -4,-0.2 -5,-0.1 -3,-0.1 0.875 60.1 134.0 83.8 93.6 -6.2 -5.4 14.4 58 58 A E - 0 0 126 -6,-0.4 -5,-0.2 0, 0.0 2,-0.2 0.546 68.2 -44.8-131.4 -64.4 -7.1 -8.3 12.1 59 59 A S - 0 0 54 -7,-1.8 -27,-1.5 5,-0.0 2,-0.5 -0.706 39.9-162.1 178.8 125.6 -4.9 -8.6 9.0 60 60 A I + 0 0 1 -9,-2.4 2,-0.4 -2,-0.2 3,-0.1 -0.933 20.9 161.1-121.8 109.4 -3.5 -6.1 6.4 61 61 A V >> - 0 0 53 -2,-0.5 4,-1.6 1,-0.1 3,-0.7 -0.976 37.9-143.2-132.2 120.7 -2.2 -7.6 3.1 62 62 A K T 34 S+ 0 0 159 -2,-0.4 3,-0.4 1,-0.3 -1,-0.1 0.866 107.8 51.7 -44.1 -43.6 -1.8 -5.6 -0.1 63 63 A D T 34 S+ 0 0 128 1,-0.2 -1,-0.3 -3,-0.1 -3,-0.0 0.896 116.3 38.7 -62.5 -41.7 -3.0 -8.6 -2.0 64 64 A K T <4 S+ 0 0 119 -3,-0.7 -1,-0.2 2,-0.0 -2,-0.2 0.476 104.7 94.0 -87.1 -3.3 -6.1 -8.9 0.2 65 65 A V < 0 0 20 -4,-1.6 -34,-0.2 -3,-0.4 -35,-0.1 -0.608 360.0 360.0 -91.1 151.1 -6.4 -5.1 0.2 66 66 A F 0 0 175 -36,-1.1 -1,-0.1 -2,-0.2 -37,-0.1 0.615 360.0 360.0-129.1 360.0 -8.6 -3.2 -2.2