==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=17-MAY-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 26-MAR-12 4EC2 . COMPND 2 MOLECULE: FRATAXIN HOMOLOG, MITOCHONDRIAL; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR C.A.G.SODERBERG,S.RAJAN,O.GAKH,G.ISAYA,S.AL-KARADAGHI . 112 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7585.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 58.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 23.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 61 A V 0 0 179 0, 0.0 2,-1.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -74.2 -1.8 32.1 -65.0 2 62 A P >> - 0 0 83 0, 0.0 3,-1.5 0, 0.0 4,-0.6 -0.226 360.0-178.2 -69.9 87.6 -2.1 34.7 -62.1 3 63 A Q T 34 S+ 0 0 137 -2,-1.0 4,-0.2 1,-0.3 3,-0.0 0.662 70.8 70.3 -55.5 -26.5 1.5 35.9 -61.7 4 64 A E T 34 S+ 0 0 137 1,-0.2 3,-0.5 2,-0.1 -1,-0.3 0.762 95.3 55.3 -69.8 -23.2 0.7 38.3 -58.7 5 65 A V T X4 S+ 0 0 71 -3,-1.5 3,-1.7 1,-0.2 -1,-0.2 0.939 99.2 54.5 -72.7 -51.5 0.1 35.4 -56.3 6 66 A L T 3< S+ 0 0 110 -4,-0.6 -1,-0.2 1,-0.3 -2,-0.1 0.241 95.0 67.9 -80.9 13.7 3.2 33.3 -56.5 7 67 A N T 3 S+ 0 0 106 -3,-0.5 -1,-0.3 -4,-0.2 -2,-0.1 0.234 85.2 94.4-106.6 9.8 5.6 36.2 -55.6 8 68 A L S < S- 0 0 85 -3,-1.7 2,-2.9 1,-0.0 -3,-0.0 -0.629 98.7 -97.8 -91.8 153.8 4.1 36.3 -52.1 9 69 A P - 0 0 123 0, 0.0 -3,-0.1 0, 0.0 -2,-0.1 -0.436 63.3-170.9 -68.6 76.9 5.6 34.5 -49.1 10 70 A L + 0 0 102 -2,-2.9 2,-0.3 -5,-0.1 -4,-0.0 -0.289 16.8 174.4 -74.8 154.8 3.1 31.7 -49.7 11 71 A E - 0 0 170 -2,-0.0 2,-0.2 0, 0.0 -3,-0.0 -0.965 33.5-114.0-156.6 144.6 2.4 28.8 -47.5 12 72 A K - 0 0 195 -2,-0.3 2,-0.0 1,-0.1 0, 0.0 -0.571 43.8-110.2 -74.2 143.6 -0.1 26.0 -47.4 13 73 A A - 0 0 82 -2,-0.2 2,-0.1 1,-0.1 -1,-0.1 -0.337 32.4-107.7 -74.2 160.3 -2.5 26.3 -44.5 14 74 A H - 0 0 124 1,-0.1 2,-0.5 2,-0.0 -1,-0.1 -0.492 34.6 -97.2 -80.8 155.7 -2.3 23.8 -41.6 15 75 A E >> - 0 0 83 -2,-0.1 4,-1.8 1,-0.1 3,-0.7 -0.644 33.2-134.9 -64.8 123.2 -4.9 21.1 -40.9 16 76 A E H 3> S+ 0 0 121 -2,-0.5 4,-1.0 1,-0.3 -1,-0.1 0.755 107.0 53.8 -59.9 -23.6 -7.1 22.7 -38.3 17 77 A A H 3> S+ 0 0 1 2,-0.2 4,-2.2 1,-0.2 -1,-0.3 0.862 104.8 55.1 -73.0 -37.5 -7.0 19.5 -36.3 18 78 A D H <> S+ 0 0 50 -3,-0.7 4,-1.9 1,-0.2 -2,-0.2 0.852 103.1 55.3 -61.7 -38.0 -3.2 19.6 -36.4 19 79 A D H X S+ 0 0 66 -4,-1.8 4,-1.7 1,-0.2 -1,-0.2 0.881 110.9 45.2 -64.1 -36.8 -3.2 23.1 -34.9 20 80 A Y H X S+ 0 0 25 -4,-1.0 4,-2.1 2,-0.2 -2,-0.2 0.906 110.9 50.7 -73.4 -44.2 -5.3 21.8 -31.9 21 81 A L H X S+ 0 0 1 -4,-2.2 4,-2.3 2,-0.2 -2,-0.2 0.863 110.8 49.2 -65.7 -36.7 -3.3 18.6 -31.3 22 82 A D H X S+ 0 0 91 -4,-1.9 4,-1.8 2,-0.2 5,-0.3 0.952 114.2 45.4 -66.2 -47.8 0.0 20.6 -31.2 23 83 A H H X S+ 0 0 128 -4,-1.7 4,-1.0 -5,-0.2 -2,-0.2 0.795 113.1 52.6 -60.5 -31.4 -1.5 23.1 -28.8 24 84 A L H < S+ 0 0 16 -4,-2.1 -1,-0.2 2,-0.2 -2,-0.2 0.909 106.6 52.6 -72.7 -41.0 -2.9 20.2 -26.8 25 85 A L H >X S+ 0 0 32 -4,-2.3 4,-3.1 1,-0.2 3,-1.9 0.954 111.6 40.9 -63.4 -57.4 0.4 18.4 -26.5 26 86 A D H 3< S+ 0 0 94 -4,-1.8 4,-0.4 1,-0.3 -1,-0.2 0.829 114.3 55.5 -63.3 -28.5 2.6 21.2 -25.1 27 87 A S T 3< S+ 0 0 61 -4,-1.0 -1,-0.3 -5,-0.3 -2,-0.2 0.107 115.7 39.9 -87.0 21.6 -0.3 22.2 -22.9 28 88 A L T <4 S+ 0 0 19 -3,-1.9 -2,-0.2 3,-0.0 4,-0.2 0.500 110.8 50.9-136.2 -39.7 -0.3 18.6 -21.6 29 89 A E S < S+ 0 0 94 -4,-3.1 -3,-0.2 2,-0.2 -2,-0.1 0.428 111.3 53.0 -82.2 0.8 3.4 17.8 -21.3 30 90 A E S S+ 0 0 145 -4,-0.4 3,-0.4 -5,-0.3 4,-0.4 0.596 110.2 47.9 -93.5 -24.2 3.6 21.1 -19.3 31 91 A L S S+ 0 0 59 1,-0.2 -2,-0.2 2,-0.2 -4,-0.1 0.475 92.5 80.2 -90.8 -5.4 0.8 19.6 -17.3 32 92 A S S S+ 0 0 14 1,-0.2 -1,-0.2 -4,-0.2 -3,-0.1 0.085 87.5 59.0 -88.5 22.8 2.8 16.3 -17.0 33 93 A E S S+ 0 0 138 -3,-0.4 -1,-0.2 -5,-0.1 -2,-0.2 0.681 93.5 60.5-111.1 -44.8 4.8 17.9 -14.2 34 94 A A S S+ 0 0 60 -4,-0.4 -2,-0.1 3,-0.1 3,-0.1 0.039 83.3 107.4 -76.1 25.7 1.9 18.7 -11.8 35 95 A H S S- 0 0 48 1,-0.2 75,-0.1 4,-0.1 -3,-0.0 -0.792 70.1-142.9 -89.6 144.9 1.2 15.0 -11.7 36 96 A P S S- 0 0 103 0, 0.0 -1,-0.2 0, 0.0 74,-0.1 0.977 84.1 -56.0 -61.2 -63.5 2.2 13.3 -8.5 37 97 A D S S+ 0 0 132 -3,-0.1 -3,-0.1 0, 0.0 -5,-0.0 -0.114 123.0 108.9-154.0 29.3 3.2 10.3 -10.6 38 98 A C S S+ 0 0 29 1,-0.2 17,-0.4 2,-0.1 -6,-0.0 0.570 74.5 34.4-103.2 -17.4 -0.3 10.3 -12.1 39 99 A I S S+ 0 0 8 14,-0.1 -1,-0.2 1,-0.1 14,-0.1 -0.511 74.1 162.6-128.7 69.6 -0.2 11.5 -15.7 40 100 A P + 0 0 57 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.862 50.4 33.4 -59.1 -53.0 3.2 10.1 -16.6 41 101 A D + 0 0 55 11,-0.4 11,-1.9 2,-0.0 2,-0.4 -0.884 45.0 176.2-122.9 138.5 3.3 10.1 -20.4 42 102 A V E +A 51 0A 8 -2,-0.4 2,-0.4 9,-0.2 9,-0.2 -0.995 16.4 175.0-126.6 137.6 2.1 12.1 -23.4 43 103 A E E -A 50 0A 96 7,-2.2 7,-3.6 -2,-0.4 2,-0.8 -0.956 23.4-163.7-147.8 125.0 3.1 11.2 -26.9 44 104 A L E +A 49 0A 43 -2,-0.4 5,-0.3 5,-0.3 -2,-0.0 -0.871 18.0 178.0-105.6 97.8 2.1 12.5 -30.3 45 105 A S - 0 0 80 3,-2.5 -1,-0.2 -2,-0.8 4,-0.1 0.994 66.6 -43.0 -66.7 -72.5 3.2 9.7 -32.7 46 106 A H S S- 0 0 184 2,-0.2 -1,-0.1 0, 0.0 3,-0.1 -0.298 122.9 -26.0-160.4 69.4 2.1 10.9 -36.2 47 107 A G S S+ 0 0 21 1,-0.1 16,-1.2 -29,-0.1 2,-0.5 0.414 121.7 97.8 95.7 2.8 -1.4 12.4 -36.0 48 108 A V E - B 0 62A 49 14,-0.2 -3,-2.5 2,-0.0 2,-0.5 -0.952 57.2-162.0-127.2 113.0 -2.1 10.2 -33.0 49 109 A M E -AB 44 61A 0 12,-2.0 12,-2.4 -2,-0.5 2,-0.5 -0.791 6.7-163.9 -91.4 130.6 -1.8 11.6 -29.5 50 110 A T E -AB 43 60A 36 -7,-3.6 -7,-2.2 -2,-0.5 2,-0.5 -0.961 5.1-173.2-114.3 129.6 -1.6 9.0 -26.7 51 111 A L E -AB 42 59A 11 8,-1.5 8,-4.5 -2,-0.5 2,-0.6 -0.988 9.5-155.2-121.5 128.2 -2.2 10.0 -23.1 52 112 A E E + B 0 58A 75 -11,-1.9 -11,-0.4 -2,-0.5 6,-0.2 -0.910 19.4 167.4-101.6 120.3 -1.6 7.6 -20.2 53 113 A I E >> - B 0 57A 1 4,-3.2 4,-3.5 -2,-0.6 3,-1.0 -0.847 20.2-160.4-129.3 96.6 -3.6 8.2 -17.0 54 114 A P T 34 S+ 0 0 90 0, 0.0 4,-0.1 0, 0.0 -15,-0.1 0.656 87.7 60.1 -57.3 -25.0 -3.1 5.0 -15.0 55 115 A A T 34 S+ 0 0 86 -17,-0.4 -16,-0.1 2,-0.1 -17,-0.0 0.959 126.3 14.4 -64.4 -52.0 -6.2 5.8 -12.9 56 116 A F T <4 S- 0 0 64 -3,-1.0 2,-0.3 1,-0.3 -1,-0.1 0.909 111.6-116.0 -89.7 -53.2 -8.5 5.7 -15.9 57 117 A G E < -B 53 0A 24 -4,-3.5 -4,-3.2 2,-0.0 2,-0.6 -0.998 52.4 -21.8 152.7-148.2 -6.4 4.1 -18.6 58 118 A T E -B 52 0A 87 -2,-0.3 -6,-0.3 -6,-0.2 2,-0.2 -0.898 56.0-150.9-102.0 123.0 -4.9 5.0 -21.9 59 119 A Y E -B 51 0A 4 -8,-4.5 -8,-1.5 -2,-0.6 2,-0.4 -0.590 5.4-160.9 -84.2 150.7 -6.4 7.9 -23.9 60 120 A V E -BC 50 73A 50 13,-1.6 13,-1.8 -2,-0.2 2,-0.5 -0.945 6.5-174.1-133.3 114.9 -6.4 8.2 -27.6 61 121 A I E -BC 49 72A 2 -12,-2.4 -12,-2.0 -2,-0.4 2,-0.3 -0.926 21.9-170.8-102.7 134.4 -6.9 11.5 -29.4 62 122 A N E -BC 48 71A 41 9,-2.3 9,-4.1 -2,-0.5 2,-0.6 -0.959 29.7-132.7-140.1 142.8 -7.1 11.0 -33.1 63 123 A K E - C 0 70A 64 -16,-1.2 7,-0.2 -2,-0.3 6,-0.1 -0.837 39.6-168.0 -94.9 118.6 -7.3 12.9 -36.4 64 124 A Q - 0 0 57 5,-4.4 3,-0.1 -2,-0.6 4,-0.1 -0.869 27.1-103.7-123.2 142.0 -10.1 11.4 -38.6 65 125 A P - 0 0 87 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 -0.232 68.2 -69.7 -51.2 147.1 -11.4 11.6 -42.2 66 126 A P S S+ 0 0 95 0, 0.0 17,-0.0 0, 0.0 0, 0.0 0.262 97.7 98.2 -57.7-176.3 -14.5 13.8 -42.3 67 127 A N S S- 0 0 129 -3,-0.1 16,-0.0 14,-0.0 -3,-0.0 0.444 128.2 -31.1 70.5 31.3 -17.9 13.2 -41.0 68 128 A K S S- 0 0 97 1,-0.1 15,-0.2 13,-0.1 14,-0.2 0.767 72.9-121.0 90.6 129.9 -16.0 15.4 -38.6 69 129 A Q S S+ 0 0 35 12,-0.1 -5,-4.4 -6,-0.1 2,-0.6 0.600 75.5 63.7 -86.4 -34.3 -12.3 15.5 -37.8 70 130 A I E -CD 63 82A 0 12,-2.5 12,-2.0 -7,-0.2 2,-0.6 -0.846 59.1-156.6-103.6 124.6 -11.1 14.9 -34.2 71 131 A W E -CD 62 81A 79 -9,-4.1 -9,-2.3 -2,-0.6 2,-0.5 -0.836 2.7-161.9-103.2 119.7 -11.7 11.5 -32.5 72 132 A L E +CD 61 80A 3 8,-2.7 8,-2.3 -2,-0.6 2,-0.4 -0.840 10.2 179.4 -99.8 129.9 -11.8 11.1 -28.7 73 133 A A E -CD 60 79A 34 -13,-1.8 -13,-1.6 -2,-0.5 -2,-0.0 -0.831 14.3-179.1-125.5 89.4 -11.4 7.6 -27.2 74 134 A S E > - D 0 78A 8 4,-2.8 4,-1.5 -2,-0.4 -15,-0.1 -0.773 28.1-149.4 -96.0 132.4 -11.6 8.2 -23.4 75 135 A P T 4 S+ 0 0 57 0, 0.0 -1,-0.1 0, 0.0 -16,-0.1 0.516 101.3 38.2 -75.6 -3.2 -11.2 5.2 -21.1 76 136 A L T 4 S+ 0 0 91 2,-0.2 -2,-0.0 -19,-0.0 -17,-0.0 0.781 128.9 23.0-108.0 -52.5 -13.6 7.0 -18.7 77 137 A S T 4 S- 0 0 62 1,-0.3 28,-0.0 3,-0.0 0, 0.0 0.406 101.3-127.9-103.4 -0.3 -16.3 8.8 -20.8 78 138 A G E < -D 74 0A 24 -4,-1.5 -4,-2.8 2,-0.0 -1,-0.3 -0.460 46.8 -26.7 90.5-160.9 -16.1 6.6 -24.0 79 139 A P E +D 73 0A 68 0, 0.0 2,-0.3 0, 0.0 -6,-0.2 -0.590 57.6 168.6 -93.5 155.6 -15.8 7.7 -27.6 80 140 A N E -D 72 0A 23 -8,-2.3 -8,-2.7 -2,-0.2 2,-0.4 -0.981 22.7-135.0-159.3 167.5 -16.7 11.0 -29.3 81 141 A R E -D 71 0A 69 -2,-0.3 11,-2.1 -10,-0.2 2,-0.4 -0.979 18.4-164.8-134.5 138.4 -16.4 13.1 -32.5 82 142 A F E +DE 70 91A 0 -12,-2.0 -12,-2.5 -2,-0.4 2,-0.3 -0.953 13.6 162.7-133.7 140.6 -15.6 16.7 -33.0 83 143 A D E - E 0 90A 44 7,-1.5 7,-2.2 -2,-0.4 2,-0.3 -0.906 46.5 -74.6-139.1 173.9 -15.7 19.4 -35.7 84 144 A L E + E 0 89A 62 -2,-0.3 5,-0.2 5,-0.2 -16,-0.0 -0.504 44.6 160.6 -74.7 130.1 -15.6 23.2 -35.8 85 145 A L S S- 0 0 123 3,-1.5 -1,-0.1 -2,-0.3 4,-0.1 0.561 84.0 -14.9-102.6 -94.4 -18.6 25.3 -34.8 86 146 A N S S- 0 0 161 2,-0.2 3,-0.1 1,-0.0 -2,-0.1 -0.282 124.5 -58.7-105.0 47.8 -17.5 28.8 -34.0 87 147 A G S S+ 0 0 59 1,-0.3 2,-0.3 -2,-0.0 -3,-0.1 0.429 116.4 87.9 96.4 -1.1 -13.8 28.1 -33.8 88 148 A E S S- 0 0 58 -5,-0.1 -3,-1.5 10,-0.0 2,-0.3 -0.938 84.3 -98.2-125.4 157.3 -13.8 25.5 -31.0 89 149 A W E -E 84 0A 12 -2,-0.3 9,-2.3 -5,-0.2 2,-0.4 -0.565 43.5-169.6 -84.2 132.8 -14.2 21.8 -31.3 90 150 A V E -EF 83 97A 25 -7,-2.2 -7,-1.5 -2,-0.3 2,-0.2 -0.935 23.8-109.9-133.1 136.5 -17.6 20.4 -30.6 91 151 A S E > -E 82 0A 3 5,-2.0 4,-0.6 -2,-0.4 -9,-0.2 -0.445 13.2-150.0 -68.2 129.7 -19.2 17.0 -30.1 92 152 A L T 4 S+ 0 0 80 -11,-2.1 -1,-0.1 -2,-0.2 -10,-0.1 0.785 95.8 54.4 -66.1 -29.4 -21.5 15.7 -32.8 93 153 A R T 4 S- 0 0 157 -12,-0.3 -1,-0.2 3,-0.1 -11,-0.0 0.972 134.9 -9.2 -69.6 -56.3 -23.5 13.8 -30.2 94 154 A N T 4 S- 0 0 94 2,-0.1 -2,-0.1 0, 0.0 -1,-0.1 0.658 91.2-106.7-121.7 -27.5 -24.4 16.5 -27.7 95 155 A G < + 0 0 42 -4,-0.6 2,-0.2 1,-0.3 -3,-0.1 0.613 62.0 152.6 105.4 17.5 -22.5 19.7 -28.6 96 156 A T - 0 0 62 -6,-0.1 -5,-2.0 1,-0.1 -1,-0.3 -0.572 49.2-105.8 -85.6 142.1 -20.0 19.7 -25.8 97 157 A K B > -F 90 0A 88 -2,-0.2 4,-0.7 -7,-0.2 -7,-0.2 -0.397 15.9-144.2 -64.4 135.9 -16.5 21.3 -26.1 98 158 A L H >> S+ 0 0 0 -9,-2.3 4,-1.5 2,-0.2 3,-0.9 0.911 103.6 51.9 -63.9 -44.3 -13.6 18.9 -26.5 99 159 A T H 3> S+ 0 0 38 -10,-0.4 4,-1.1 1,-0.2 -1,-0.2 0.940 105.1 56.1 -57.0 -48.2 -11.4 21.2 -24.5 100 160 A D H 3> S+ 0 0 86 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.698 106.1 52.9 -57.7 -23.3 -14.0 21.3 -21.7 101 161 A I H