==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 14-FEB-07 2EDF . COMPND 2 MOLECULE: OBSCURIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.WAKABAYASHI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7117.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 58.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 26.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 23 22.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 134 0, 0.0 2,-0.8 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 122.5 8.8 38.0 2.3 2 2 A S - 0 0 134 4,-0.0 4,-0.1 0, 0.0 2,-0.1 -0.829 360.0-167.4-101.5 100.9 8.5 34.4 1.0 3 3 A S + 0 0 125 -2,-0.8 0, 0.0 2,-0.1 0, 0.0 -0.330 52.6 46.5 -81.4 166.3 11.9 32.6 1.4 4 4 A G S S- 0 0 60 -2,-0.1 3,-0.1 2,-0.1 0, 0.0 0.872 99.1 -85.5 66.8 105.5 12.8 29.3 -0.2 5 5 A S - 0 0 128 1,-0.1 -2,-0.1 2,-0.0 0, 0.0 0.002 60.4 -87.4 -38.8 138.7 11.9 29.0 -3.9 6 6 A S + 0 0 124 -4,-0.1 -1,-0.1 1,-0.0 -2,-0.1 -0.150 69.4 136.0 -51.8 144.0 8.3 27.9 -4.3 7 7 A G - 0 0 37 -3,-0.1 -1,-0.0 27,-0.0 -2,-0.0 -0.088 29.2-165.1 165.7 84.9 7.9 24.1 -4.3 8 8 A P - 0 0 76 0, 0.0 24,-0.0 0, 0.0 0, 0.0 0.015 23.5-129.4 -69.8-178.5 5.1 22.2 -2.4 9 9 A A + 0 0 0 24,-0.2 25,-0.2 23,-0.1 74,-0.2 0.042 53.3 144.3-123.3 23.3 5.0 18.5 -1.7 10 10 A A - 0 0 31 22,-0.2 23,-2.8 1,-0.1 2,-0.6 -0.031 57.9 -97.3 -57.7 166.8 1.5 17.7 -3.0 11 11 A I E +A 32 0A 18 21,-0.2 21,-0.2 1,-0.2 75,-0.2 -0.816 41.5 169.3 -95.2 118.6 0.7 14.5 -4.7 12 12 A I E S+ 0 0 101 19,-1.1 -1,-0.2 -2,-0.6 20,-0.1 0.799 72.0 53.5 -94.0 -36.1 0.8 14.6 -8.5 13 13 A K E S-A 31 0A 130 18,-0.8 18,-1.0 74,-0.0 -1,-0.2 -0.822 79.6-158.7-106.3 96.0 0.6 10.9 -9.2 14 14 A P - 0 0 82 0, 0.0 15,-0.1 0, 0.0 73,-0.1 -0.269 22.9-101.0 -69.7 157.3 -2.4 9.4 -7.3 15 15 A L - 0 0 13 63,-0.1 2,-0.3 13,-0.1 73,-0.1 0.053 36.0-144.3 -67.0-176.6 -2.6 5.7 -6.5 16 16 A E - 0 0 137 73,-0.0 2,-0.4 0, 0.0 73,-0.1 -0.949 28.6 -76.0-148.5 166.5 -4.7 3.2 -8.5 17 17 A D - 0 0 75 -2,-0.3 2,-0.4 72,-0.1 74,-0.2 -0.522 47.9-156.7 -69.6 121.8 -6.9 0.1 -8.0 18 18 A Q E -b 91 0B 51 72,-0.6 74,-1.9 -2,-0.4 2,-0.5 -0.808 6.4-156.7-103.7 142.5 -4.7 -3.0 -7.4 19 19 A W E +b 92 0B 159 -2,-0.4 2,-0.2 72,-0.1 74,-0.2 -0.924 31.6 139.9-122.5 107.0 -5.7 -6.6 -8.1 20 20 A V E -b 93 0B 41 72,-1.3 74,-1.8 -2,-0.5 6,-0.1 -0.696 45.1 -97.1-132.1-175.5 -3.9 -9.3 -6.2 21 21 A A > - 0 0 12 72,-0.2 3,-2.0 -2,-0.2 2,-1.8 -0.677 45.7 -88.0-107.1 162.0 -4.5 -12.6 -4.4 22 22 A P T 3 S+ 0 0 38 0, 0.0 49,-0.2 0, 0.0 74,-0.1 -0.477 119.9 27.6 -69.7 85.2 -5.1 -13.4 -0.7 23 23 A G T 3 S+ 0 0 50 -2,-1.8 46,-0.3 47,-1.2 2,-0.2 0.278 94.0 110.1 144.9 -6.8 -1.5 -13.9 0.4 24 24 A E S < S- 0 0 101 -3,-2.0 46,-2.2 46,-0.5 2,-0.4 -0.497 70.4-104.2 -92.8 164.2 0.5 -11.8 -2.0 25 25 A D - 0 0 85 44,-0.2 2,-0.4 -2,-0.2 43,-0.2 -0.747 30.5-152.3 -92.0 132.3 2.4 -8.6 -1.2 26 26 A V E -C 67 0C 2 41,-0.6 41,-2.3 -2,-0.4 2,-0.5 -0.869 7.6-167.5-107.3 136.7 0.9 -5.2 -2.3 27 27 A E E -C 66 0C 99 -2,-0.4 2,-0.8 39,-0.2 39,-0.2 -0.952 2.7-170.5-127.4 113.0 2.9 -2.1 -3.1 28 28 A L E -C 65 0C 4 37,-1.2 37,-0.5 -2,-0.5 2,-0.2 -0.841 14.4-177.3-105.6 98.9 1.2 1.2 -3.5 29 29 A R + 0 0 170 -2,-0.8 2,-0.3 35,-0.2 35,-0.2 -0.489 3.1 174.9 -91.5 163.4 3.7 3.8 -4.8 30 30 A C - 0 0 6 -2,-0.2 2,-0.4 -15,-0.1 33,-0.1 -0.870 23.7-116.6-152.5-176.4 3.1 7.5 -5.4 31 31 A E E -A 13 0A 57 -18,-1.0 -19,-1.1 -2,-0.3 -18,-0.8 -0.998 18.6-166.1-137.5 138.5 4.7 10.8 -6.5 32 32 A L E -A 11 0A 9 29,-1.1 -21,-0.2 -2,-0.4 -22,-0.2 -0.952 30.6-128.8-125.8 144.6 5.2 14.1 -4.6 33 33 A S S S+ 0 0 61 -23,-2.8 2,-0.3 -2,-0.4 -24,-0.2 0.601 99.6 21.3 -63.8 -9.2 6.2 17.5 -5.8 34 34 A R S S- 0 0 144 -24,-0.3 3,-0.2 -25,-0.2 2,-0.1 -0.990 77.5-125.7-157.6 152.3 8.8 17.4 -3.1 35 35 A A S S+ 0 0 45 -2,-0.3 25,-0.1 1,-0.2 24,-0.0 -0.399 81.2 50.2 -94.4 174.0 10.7 14.9 -1.0 36 36 A G S S+ 0 0 70 1,-0.2 -1,-0.2 23,-0.2 24,-0.1 0.930 77.7 140.1 64.2 46.8 11.0 14.6 2.8 37 37 A T - 0 0 15 -3,-0.2 -1,-0.2 -28,-0.1 2,-0.1 -0.971 52.2-116.7-126.7 138.2 7.3 15.0 3.5 38 38 A P - 0 0 106 0, 0.0 45,-0.5 0, 0.0 2,-0.3 -0.357 30.7-161.8 -69.8 147.8 5.2 13.1 6.0 39 39 A V - 0 0 45 43,-0.1 2,-0.4 -2,-0.1 43,-0.2 -0.890 12.8-148.1-130.2 160.7 2.3 10.8 4.9 40 40 A H - 0 0 76 41,-0.4 41,-2.2 -2,-0.3 2,-0.7 -0.911 8.1-158.1-134.8 107.2 -0.8 9.3 6.4 41 41 A W E -E 80 0D 9 -2,-0.4 7,-2.0 7,-0.2 2,-0.6 -0.750 12.1-171.8 -87.9 112.4 -2.0 5.9 5.2 42 42 A L E -EF 79 47D 35 37,-1.3 37,-2.2 -2,-0.7 2,-0.6 -0.916 3.2-171.9-109.6 116.8 -5.7 5.5 6.0 43 43 A K E S-E 78 0D 21 3,-2.1 35,-0.2 -2,-0.6 3,-0.1 -0.920 74.8 -16.1-111.6 113.5 -7.2 2.0 5.5 44 44 A D S S- 0 0 80 33,-1.2 -1,-0.2 -2,-0.6 3,-0.1 0.894 128.6 -53.1 63.6 41.1 -11.0 1.8 5.8 45 45 A R S S+ 0 0 250 32,-0.5 2,-0.4 1,-0.2 -1,-0.2 0.823 115.6 122.0 63.8 31.5 -11.2 5.1 7.6 46 46 A K - 0 0 122 -3,-0.1 -3,-2.1 0, 0.0 2,-0.4 -0.986 67.6-116.6-129.6 136.9 -8.6 3.9 10.1 47 47 A A B -F 42 0D 64 -2,-0.4 2,-0.2 -5,-0.2 -5,-0.2 -0.559 32.2-148.9 -73.0 124.0 -5.2 5.3 10.9 48 48 A I - 0 0 22 -7,-2.0 2,-0.4 -2,-0.4 -7,-0.2 -0.620 2.1-146.6 -93.9 153.7 -2.4 2.9 10.0 49 49 A R - 0 0 205 -2,-0.2 5,-0.4 -9,-0.1 -9,-0.0 -0.979 26.5-108.0-125.1 126.1 1.0 2.6 11.8 50 50 A K + 0 0 155 -2,-0.4 2,-0.3 3,-0.1 5,-0.2 -0.264 63.9 133.1 -51.3 119.4 4.3 1.8 10.1 51 51 A S S S- 0 0 55 3,-2.4 5,-0.0 1,-0.0 -1,-0.0 -0.944 73.1 -65.8-158.9 176.1 5.1 -1.8 11.2 52 52 A Q S S+ 0 0 171 -2,-0.3 16,-0.3 1,-0.2 3,-0.1 0.854 134.5 42.9 -35.7 -50.0 6.3 -5.2 9.9 53 53 A K S S+ 0 0 67 1,-0.2 15,-1.7 14,-0.1 2,-0.8 0.989 118.9 42.2 -63.2 -62.4 3.0 -5.5 8.0 54 54 A Y E S-D 67 0C 25 -5,-0.4 -3,-2.4 13,-0.2 2,-0.9 -0.789 72.6-169.8 -93.2 107.0 2.9 -1.9 6.7 55 55 A D E -D 66 0C 52 11,-1.6 11,-1.4 -2,-0.8 2,-1.1 -0.804 9.7-154.6-100.2 97.0 6.4 -0.9 5.5 56 56 A V E -D 65 0C 44 -2,-0.9 2,-1.0 9,-0.2 9,-0.2 -0.584 12.0-172.9 -74.0 100.8 6.3 2.8 4.7 57 57 A V E -D 64 0C 52 7,-2.8 7,-2.2 -2,-1.1 2,-1.1 -0.766 2.6-176.1 -99.7 91.2 9.1 3.3 2.2 58 58 A C E +D 63 0C 66 -2,-1.0 5,-0.2 5,-0.2 2,-0.1 -0.728 19.9 157.8 -90.6 94.5 9.4 7.1 1.6 59 59 A E E > -D 62 0C 134 3,-2.8 3,-3.1 -2,-1.1 -23,-0.2 -0.391 55.4 -27.7-105.7-175.0 12.0 7.4 -1.1 60 60 A G T 3 S- 0 0 52 1,-0.3 -1,-0.2 -2,-0.1 -28,-0.1 -0.057 126.2 -38.0 -37.2 104.5 12.8 10.2 -3.6 61 61 A T T 3 S+ 0 0 43 1,-0.1 -29,-1.1 -3,-0.1 2,-0.3 0.829 121.3 114.7 37.0 42.8 9.5 11.9 -3.9 62 62 A M E < - D 0 59C 33 -3,-3.1 -3,-2.8 -31,-0.2 2,-0.7 -0.953 49.1-166.3-145.5 121.9 8.0 8.4 -3.8 63 63 A A E + D 0 58C 2 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.899 14.5 179.0-112.4 105.9 5.8 6.9 -1.1 64 64 A M E - D 0 57C 26 -7,-2.2 -7,-2.8 -2,-0.7 2,-0.5 -0.846 12.6-160.4-107.9 142.3 5.4 3.1 -1.2 65 65 A L E -CD 28 56C 0 -37,-0.5 -37,-1.2 -2,-0.4 2,-0.6 -0.936 5.6-156.3-126.0 109.5 3.4 1.0 1.2 66 66 A V E -CD 27 55C 23 -11,-1.4 -11,-1.6 -2,-0.5 2,-0.8 -0.737 2.8-165.5 -87.4 121.2 4.1 -2.7 1.5 67 67 A I E -CD 26 54C 0 -41,-2.3 -41,-0.6 -2,-0.6 -13,-0.2 -0.651 16.0-149.8-106.8 74.9 1.2 -4.8 2.8 68 68 A R S S+ 0 0 165 -15,-1.7 -43,-0.1 -2,-0.8 -44,-0.1 -0.074 75.5 2.5 -43.2 135.9 2.8 -8.1 3.7 69 69 A G S S- 0 0 34 -46,-0.3 2,-1.0 1,-0.2 -44,-0.2 0.939 80.8-153.2 44.0 82.4 0.3 -10.9 3.3 70 70 A A - 0 0 0 -46,-2.2 -47,-1.2 -49,-0.3 -46,-0.5 -0.749 15.4-168.7 -89.6 102.0 -2.7 -9.1 1.9 71 71 A S > - 0 0 52 -2,-1.0 4,-0.8 -49,-0.2 3,-0.5 -0.326 43.4 -90.6 -84.1 169.6 -5.8 -11.1 2.9 72 72 A L T 4 S+ 0 0 102 1,-0.3 3,-0.4 2,-0.2 21,-0.1 0.785 131.2 52.8 -49.2 -28.4 -9.4 -10.6 1.6 73 73 A K T 4 S+ 0 0 161 1,-0.2 -1,-0.3 3,-0.0 -3,-0.1 0.906 90.8 70.7 -75.2 -43.9 -9.7 -8.2 4.6 74 74 A D T 4 S+ 0 0 10 -3,-0.5 2,-0.2 -5,-0.1 -1,-0.2 0.746 77.8 106.2 -44.6 -24.6 -6.7 -6.2 3.7 75 75 A A < + 0 0 31 -4,-0.8 2,-0.3 -3,-0.4 17,-0.1 -0.427 49.9 113.3 -63.2 123.1 -8.8 -4.9 0.9 76 76 A G S S- 0 0 12 -2,-0.2 15,-2.3 16,-0.0 2,-0.8 -0.952 70.2 -60.6-169.9-173.5 -10.0 -1.4 1.6 77 77 A E E - G 0 90D 105 -2,-0.3 -33,-1.2 13,-0.2 2,-0.7 -0.794 43.9-156.6 -93.2 109.3 -9.9 2.3 0.6 78 78 A Y E -EG 43 89D 1 11,-0.9 11,-0.8 -2,-0.8 2,-0.7 -0.760 8.7-170.4 -89.3 113.1 -6.4 3.6 0.9 79 79 A T E -EG 42 88D 31 -37,-2.2 2,-1.6 -2,-0.7 -37,-1.3 -0.890 12.0-153.9-108.5 107.8 -6.4 7.4 1.4 80 80 A C E -EG 41 87D 1 7,-2.9 2,-1.1 -2,-0.7 7,-0.9 -0.610 13.3-166.8 -81.3 87.3 -2.9 9.0 1.2 81 81 A E E + G 0 86D 86 -41,-2.2 -41,-0.4 -2,-1.6 5,-0.2 -0.648 16.5 174.4 -79.9 99.8 -3.5 12.1 3.3 82 82 A V - 0 0 6 3,-1.1 -43,-0.1 -2,-1.1 -72,-0.1 -0.309 51.2 -66.4 -96.2-177.6 -0.5 14.3 2.5 83 83 A E S S- 0 0 95 -45,-0.5 -73,-0.1 -74,-0.2 -44,-0.0 0.862 118.5 -28.3 -31.0 -71.3 0.4 17.8 3.6 84 84 A A S S+ 0 0 87 2,-0.0 -1,-0.2 0, 0.0 -74,-0.0 0.606 126.6 78.0-122.4 -31.0 -2.5 19.4 1.7 85 85 A S - 0 0 32 -4,-0.1 -3,-1.1 -76,-0.0 2,-0.3 -0.076 59.5-162.7 -73.7 179.1 -3.0 17.0 -1.2 86 86 A K E -G 81 0D 133 -75,-0.2 2,-0.4 -5,-0.2 -5,-0.2 -0.929 8.7-160.8-166.8 140.9 -4.8 13.6 -1.0 87 87 A S E -G 80 0D 4 -7,-0.9 -7,-2.9 -2,-0.3 2,-0.4 -0.991 6.9-164.5-131.4 134.9 -5.1 10.4 -3.0 88 88 A T E +G 79 0D 78 -2,-0.4 2,-0.3 -9,-0.2 -9,-0.2 -0.907 15.1 159.9-119.5 146.4 -7.8 7.8 -2.8 89 89 A A E -G 78 0D 10 -11,-0.8 -11,-0.9 -2,-0.4 2,-0.5 -0.959 31.8-123.8-154.8 169.5 -7.8 4.2 -4.2 90 90 A S E -G 77 0D 59 -2,-0.3 -72,-0.6 -13,-0.2 2,-0.3 -0.974 20.0-150.9-127.6 120.1 -9.5 0.8 -3.9 91 91 A L E -b 18 0B 10 -15,-2.3 2,-0.3 -2,-0.5 -72,-0.1 -0.623 11.2-157.9 -88.7 146.5 -7.6 -2.4 -3.2 92 92 A H E +b 19 0B 64 -74,-1.9 -72,-1.3 -2,-0.3 2,-0.3 -0.918 13.1 176.9-125.1 151.0 -8.8 -5.8 -4.4 93 93 A V E +b 20 0B 13 -2,-0.3 2,-0.4 -74,-0.2 -72,-0.2 -0.823 8.3 162.5-157.4 112.4 -8.1 -9.3 -3.2 94 94 A E - 0 0 146 -74,-1.8 2,-0.1 -2,-0.3 -2,-0.0 -0.984 37.5-110.4-134.3 144.1 -9.6 -12.6 -4.5 95 95 A E - 0 0 90 -2,-0.4 2,-0.2 -74,-0.2 4,-0.1 -0.370 35.6-117.4 -70.5 148.9 -8.5 -16.2 -4.3 96 96 A K - 0 0 130 2,-0.2 5,-0.2 1,-0.1 -1,-0.1 -0.518 17.6-118.0 -86.6 155.3 -7.3 -18.0 -7.4 97 97 A A S S+ 0 0 99 -2,-0.2 2,-0.8 1,-0.2 -1,-0.1 0.904 105.3 59.0 -56.8 -44.1 -9.0 -21.0 -9.0 98 98 A S S S+ 0 0 115 2,-0.0 -2,-0.2 4,-0.0 -1,-0.2 -0.800 84.6 91.1 -93.8 110.3 -5.9 -23.2 -8.3 99 99 A G S S- 0 0 51 -2,-0.8 3,-0.1 -4,-0.1 -2,-0.0 -0.918 89.9 -59.9-169.5-165.5 -5.1 -23.3 -4.6 100 100 A P S S- 0 0 135 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 0.704 114.6 -7.7 -69.8 -20.2 -5.6 -25.1 -1.3 101 101 A S - 0 0 75 -5,-0.2 2,-0.3 2,-0.0 -5,-0.1 -0.980 62.4-142.6-168.1 164.8 -9.3 -24.4 -1.5 102 102 A S 0 0 106 -2,-0.3 -5,-0.1 -3,-0.1 -6,-0.0 -0.971 360.0 360.0-139.0 153.0 -12.0 -22.7 -3.4 103 103 A G 0 0 129 -2,-0.3 -8,-0.1 -8,-0.1 -6,-0.0 -0.118 360.0 360.0 177.5 360.0 -15.3 -20.9 -2.6