==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 14-FEB-07 2EDR . COMPND 2 MOLECULE: OBSCURIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.KUROSAKI,K.IZUMI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6718.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 20.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 16 15.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 140 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 57.6 7.4 31.9 8.3 2 2 A S - 0 0 110 1,-0.2 0, 0.0 2,-0.1 0, 0.0 -0.766 360.0 -76.6-113.7 159.9 7.8 33.3 4.8 3 3 A S S S+ 0 0 121 -2,-0.3 -1,-0.2 2,-0.0 0, 0.0 0.020 99.2 9.6 -47.3 158.4 5.3 34.7 2.3 4 4 A G S S- 0 0 68 -3,-0.1 2,-0.3 2,-0.0 -2,-0.1 -0.233 91.6 -90.7 65.6-156.5 3.1 32.2 0.4 5 5 A S - 0 0 127 1,-0.1 -2,-0.0 -4,-0.1 0, 0.0 -0.899 8.1-131.7-147.7 175.1 3.1 28.5 1.4 6 6 A S - 0 0 123 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.0 0.856 46.0-139.2 -98.2 -51.3 4.8 25.2 0.7 7 7 A G - 0 0 35 3,-0.0 -1,-0.2 76,-0.0 3,-0.1 -0.850 39.7 -15.7 125.6-161.9 1.9 22.8 0.2 8 8 A P S S- 0 0 48 0, 0.0 2,-0.5 0, 0.0 74,-0.1 0.008 86.5 -66.2 -69.8-179.0 1.1 19.2 1.1 9 9 A A - 0 0 0 25,-0.2 2,-0.7 72,-0.1 75,-0.2 -0.603 47.9-138.3 -76.2 122.8 3.5 16.5 2.3 10 10 A H - 0 0 94 -2,-0.5 23,-0.4 -3,-0.1 -1,-0.1 -0.730 28.1-109.0 -86.0 114.1 6.0 15.5 -0.3 11 11 A F + 0 0 17 -2,-0.7 3,-0.3 21,-0.2 21,-0.2 -0.152 43.8 172.3 -43.2 111.7 6.5 11.8 -0.3 12 12 A I S S+ 0 0 89 19,-0.8 2,-0.3 1,-0.2 -1,-0.2 0.782 74.3 39.2 -95.2 -34.5 10.0 11.4 1.1 13 13 A G S S- 0 0 29 18,-1.0 18,-0.5 73,-0.0 -1,-0.2 -0.481 84.7-160.5-115.9 61.6 10.0 7.6 1.4 14 14 A R - 0 0 171 -2,-0.3 18,-0.0 -3,-0.3 74,-0.0 0.106 33.2 -86.9 -36.5 152.3 8.2 6.4 -1.7 15 15 A L - 0 0 16 62,-0.1 2,-0.3 64,-0.1 72,-0.1 0.186 40.2-133.2 -53.5-177.1 6.9 2.9 -1.5 16 16 A R - 0 0 184 13,-0.2 72,-0.1 72,-0.1 13,-0.1 -0.915 28.4 -95.9-151.2 119.4 9.0 -0.1 -2.4 17 17 A H - 0 0 144 -2,-0.3 2,-0.3 70,-0.2 73,-0.2 -0.017 51.9-169.2 -34.4 111.4 8.1 -3.1 -4.6 18 18 A Q E -a 90 0A 31 71,-0.6 73,-2.4 70,-0.1 2,-0.5 -0.870 15.5-146.1-114.3 146.7 7.0 -5.7 -2.1 19 19 A E E +a 91 0A 135 -2,-0.3 73,-0.2 71,-0.2 2,-0.2 -0.948 23.6 171.9-116.1 119.8 6.3 -9.4 -2.6 20 20 A S E -a 92 0A 24 71,-2.5 73,-1.8 -2,-0.5 2,-0.3 -0.527 30.5-101.5-114.3-177.7 3.6 -11.1 -0.5 21 21 A I E > -a 93 0A 71 71,-0.2 3,-1.1 -2,-0.2 48,-0.2 -0.821 38.7 -98.3-109.8 148.7 1.9 -14.5 -0.5 22 22 A E T 3 S+ 0 0 68 71,-2.5 48,-0.2 -2,-0.3 3,-0.1 -0.389 108.7 13.7 -64.3 134.3 -1.5 -15.5 -2.0 23 23 A G T 3 S+ 0 0 41 46,-0.5 45,-0.6 1,-0.3 -1,-0.2 0.031 106.8 106.7 89.7 -28.3 -4.2 -15.6 0.7 24 24 A A S < S- 0 0 44 -3,-1.1 45,-3.3 44,-0.2 2,-0.6 0.028 80.8 -96.5 -71.6-174.8 -2.0 -13.8 3.2 25 25 A T - 0 0 62 42,-0.2 42,-0.2 43,-0.2 -1,-0.1 -0.899 34.2-146.6-113.8 105.3 -2.4 -10.2 4.3 26 26 A A E -B 66 0B 4 40,-1.5 40,-2.0 -2,-0.6 2,-0.4 -0.359 12.1-165.1 -68.2 146.2 -0.2 -7.7 2.5 27 27 A T E -B 65 0B 51 38,-0.2 38,-0.2 -2,-0.1 2,-0.2 -0.910 3.8-170.8-140.1 110.0 1.1 -4.7 4.4 28 28 A L - 0 0 7 36,-2.8 2,-0.3 -2,-0.4 36,-0.3 -0.555 2.3-166.5 -96.2 162.8 2.6 -1.6 2.7 29 29 A R + 0 0 143 34,-0.2 2,-0.3 -2,-0.2 34,-0.2 -0.991 11.1 163.4-151.6 141.4 4.4 1.3 4.4 30 30 A C E -C 62 0B 7 32,-2.1 32,-0.5 -2,-0.3 2,-0.3 -0.873 24.6-126.1-146.8 177.9 5.5 4.8 3.3 31 31 A E E -C 61 0B 87 -18,-0.5 -18,-1.0 -2,-0.3 -19,-0.8 -0.976 13.5-158.3-134.9 147.8 6.6 8.2 4.6 32 32 A L - 0 0 2 28,-1.5 -21,-0.2 -2,-0.3 3,-0.1 -0.948 36.0-111.9-127.2 147.3 5.4 11.8 4.1 33 33 A S S S- 0 0 49 -23,-0.4 2,-0.3 -2,-0.3 -22,-0.1 0.729 105.4 -6.3 -45.6 -22.0 7.2 15.1 4.6 34 34 A K S S- 0 0 118 2,-0.0 -1,-0.2 0, 0.0 -25,-0.2 -0.895 99.6 -67.2-174.3 143.5 4.7 15.5 7.4 35 35 A A S S+ 0 0 72 -2,-0.3 -2,-0.0 -3,-0.1 -4,-0.0 -0.070 71.8 151.1 -38.0 112.2 1.7 13.7 8.9 36 36 A A - 0 0 17 -28,-0.0 2,-0.1 -27,-0.0 25,-0.1 -0.995 48.8 -95.2-151.1 152.3 -1.0 14.1 6.2 37 37 A P + 0 0 101 0, 0.0 2,-0.2 0, 0.0 25,-0.0 -0.435 45.6 177.1 -69.7 137.5 -4.0 12.2 4.8 38 38 A V - 0 0 31 -2,-0.1 2,-0.3 17,-0.1 43,-0.3 -0.807 23.6-140.8-134.1 175.0 -3.5 9.9 1.9 39 39 A E E -E 80 0C 79 41,-2.1 41,-2.3 -2,-0.2 9,-0.1 -0.872 15.3-145.4-146.1 108.2 -5.4 7.5 -0.3 40 40 A W E -E 79 0C 1 7,-0.5 7,-3.2 -2,-0.3 2,-0.4 -0.343 13.6-160.1 -70.5 152.0 -4.0 4.2 -1.6 41 41 A R E -E 78 0C 105 37,-2.6 37,-2.6 5,-0.2 2,-1.0 -0.979 11.8-154.9-140.4 124.7 -5.0 2.9 -5.0 42 42 A K E S-E 77 0C 43 -2,-0.4 35,-0.2 1,-0.3 4,-0.1 -0.757 74.4 -43.2-100.5 89.2 -4.8 -0.7 -6.3 43 43 A G S S- 0 0 37 33,-1.8 -1,-0.3 -2,-1.0 3,-0.1 0.918 127.1 -21.6 54.4 99.9 -4.5 -0.4 -10.1 44 44 A R S S+ 0 0 250 -3,-0.2 2,-0.3 1,-0.2 -1,-0.2 0.794 122.6 112.8 39.6 33.5 -6.9 2.2 -11.3 45 45 A E - 0 0 78 2,-0.0 2,-0.5 0, 0.0 -1,-0.2 -0.884 67.5-125.2-131.2 162.4 -8.7 1.5 -8.1 46 46 A S - 0 0 49 -2,-0.3 2,-0.6 -5,-0.2 -5,-0.2 -0.939 18.3-160.2-114.1 119.6 -9.5 3.4 -4.8 47 47 A L + 0 0 1 -7,-3.2 -7,-0.5 -2,-0.5 2,-0.3 -0.870 20.4 164.7-102.0 119.1 -8.5 1.9 -1.5 48 48 A R - 0 0 157 -2,-0.6 2,-0.2 -9,-0.1 5,-0.2 -0.943 45.5 -88.5-132.7 153.8 -10.3 3.2 1.6 49 49 A D S S+ 0 0 116 -2,-0.3 5,-0.2 1,-0.1 2,-0.1 -0.412 78.0 102.7 -62.2 123.3 -10.7 2.1 5.2 50 50 A G S S- 0 0 37 3,-1.6 -1,-0.1 -2,-0.2 5,-0.0 -0.375 79.7 -6.7-160.0-118.2 -13.7 -0.2 5.4 51 51 A D S S- 0 0 161 -2,-0.1 -2,-0.1 1,-0.1 0, 0.0 0.998 137.5 -16.8 -61.8 -70.6 -14.3 -3.9 5.7 52 52 A R S S+ 0 0 76 15,-0.1 13,-0.1 2,-0.0 15,-0.1 0.742 107.2 108.3-106.5 -37.1 -10.7 -5.2 5.3 53 53 A H - 0 0 21 -5,-0.2 -3,-1.6 13,-0.1 2,-0.5 -0.211 52.4-167.1 -47.4 116.3 -9.0 -2.2 3.8 54 54 A S E +D 65 0B 35 11,-1.6 11,-2.6 -5,-0.2 -1,-0.1 -0.949 20.4 171.3-117.1 118.6 -6.7 -0.9 6.5 55 55 A L E +D 64 0B 36 -2,-0.5 9,-0.2 9,-0.2 -17,-0.1 -0.420 16.8 170.1-121.0 56.0 -5.2 2.6 6.2 56 56 A R E -D 63 0B 153 7,-0.8 7,-1.7 6,-0.1 2,-0.4 -0.408 16.4-155.4 -69.2 141.9 -3.6 3.1 9.6 57 57 A Q E -D 62 0B 99 5,-0.2 5,-0.2 -2,-0.1 2,-0.1 -0.934 16.8-171.6-122.7 144.8 -1.3 6.1 10.1 58 58 A D - 0 0 130 3,-2.9 4,-0.1 -2,-0.4 -2,-0.0 -0.551 67.7 -59.5-133.5 68.8 1.5 6.6 12.5 59 59 A G S S- 0 0 57 1,-0.2 -27,-0.1 -2,-0.1 -1,-0.1 0.913 123.3 -10.1 55.9 101.2 2.7 10.2 12.2 60 60 A A S S+ 0 0 22 1,-0.1 -28,-1.5 -29,-0.1 2,-0.3 0.822 119.8 103.8 50.2 33.4 3.9 10.9 8.7 61 61 A V E -C 31 0B 18 -30,-0.2 -3,-2.9 -25,-0.1 2,-0.3 -0.851 51.0-170.3-149.5 108.5 3.7 7.2 8.1 62 62 A C E -CD 30 57B 1 -32,-0.5 -32,-2.1 -2,-0.3 2,-0.4 -0.744 1.3-171.8-100.5 147.1 0.9 5.4 6.2 63 63 A E E - D 0 56B 51 -7,-1.7 -7,-0.8 -2,-0.3 2,-0.6 -0.946 9.2-156.3-143.1 118.2 0.4 1.7 6.0 64 64 A L E - D 0 55B 2 -2,-0.4 -36,-2.8 -36,-0.3 2,-0.6 -0.836 9.7-169.5 -97.8 121.2 -2.1 -0.2 3.8 65 65 A Q E -BD 27 54B 57 -11,-2.6 -11,-1.6 -2,-0.6 2,-0.6 -0.931 3.5-175.9-114.5 113.3 -3.2 -3.6 5.0 66 66 A I E -B 26 0B 4 -40,-2.0 -40,-1.5 -2,-0.6 3,-0.2 -0.913 11.0-156.2-112.4 109.9 -5.1 -5.8 2.5 67 67 A C S S+ 0 0 53 -2,-0.6 -42,-0.2 -42,-0.2 -43,-0.1 -0.415 71.2 34.7 -80.3 157.4 -6.4 -9.1 3.9 68 68 A G S S- 0 0 52 -45,-0.6 -44,-0.2 -2,-0.1 -1,-0.2 0.960 82.9-157.6 65.1 52.9 -7.2 -12.1 1.7 69 69 A L - 0 0 6 -45,-3.3 -46,-0.5 -3,-0.2 2,-0.3 0.003 8.4-163.4 -55.2 167.1 -4.4 -11.5 -0.8 70 70 A A >> - 0 0 26 -48,-0.2 3,-1.8 -47,-0.1 4,-1.1 -0.909 33.1-123.8-161.0 129.3 -4.7 -12.9 -4.3 71 71 A V T 34 S+ 0 0 70 1,-0.3 21,-0.3 -2,-0.3 3,-0.1 0.762 117.8 55.2 -41.8 -27.9 -2.2 -13.5 -7.2 72 72 A A T 34 S+ 0 0 87 1,-0.2 -1,-0.3 -3,-0.0 -3,-0.0 0.869 93.9 65.0 -75.6 -38.5 -4.7 -11.4 -9.2 73 73 A D T <4 S+ 0 0 35 -3,-1.8 3,-0.3 2,-0.1 -1,-0.2 0.819 81.4 105.6 -53.5 -32.1 -4.5 -8.5 -6.7 74 74 A A < + 0 0 33 -4,-1.1 17,-0.2 1,-0.2 2,-0.1 -0.130 42.7 90.6 -50.5 144.4 -0.9 -8.1 -7.7 75 75 A G S S- 0 0 40 15,-1.1 2,-0.2 13,-0.1 -1,-0.2 -0.487 86.4 -34.8 169.7 -91.9 -0.2 -5.2 -10.0 76 76 A E - 0 0 91 -3,-0.3 -33,-1.8 13,-0.2 2,-0.4 -0.721 45.6-158.7-168.7 112.3 0.8 -1.7 -8.8 77 77 A Y E -EF 42 88C 2 11,-1.9 11,-2.8 -35,-0.2 2,-0.3 -0.767 11.4-166.5 -97.9 139.9 -0.4 0.2 -5.7 78 78 A S E -EF 41 87C 8 -37,-2.6 -37,-2.6 -2,-0.4 2,-0.6 -0.928 12.9-146.1-126.1 150.1 -0.2 4.0 -5.4 79 79 A C E -EF 40 86C 0 7,-2.7 7,-1.2 -2,-0.3 2,-0.5 -0.926 13.1-165.4-120.2 107.9 -0.5 6.4 -2.5 80 80 A V E +EF 39 85C 45 -41,-2.3 -41,-2.1 -2,-0.6 5,-0.2 -0.812 19.3 163.0 -95.8 123.9 -2.1 9.8 -3.2 81 81 A C - 0 0 21 3,-1.5 -1,-0.2 -2,-0.5 4,-0.1 0.686 68.5 -69.7-107.3 -29.6 -1.7 12.4 -0.6 82 82 A G S S+ 0 0 51 2,-1.0 -72,-0.1 -74,-0.1 3,-0.0 -0.303 111.6 5.4 176.2 -82.8 -2.5 15.5 -2.6 83 83 A E S S+ 0 0 170 -74,-0.1 2,-0.2 -3,-0.0 -73,-0.1 0.764 124.4 47.2 -97.6 -33.7 -0.3 16.9 -5.4 84 84 A E - 0 0 54 -75,-0.2 -3,-1.5 2,-0.0 -2,-1.0 -0.701 63.1-177.6-108.4 161.6 2.3 14.1 -5.3 85 85 A R E -F 80 0C 124 -2,-0.2 2,-0.4 -5,-0.2 -5,-0.2 -0.977 12.5-148.8-158.9 144.1 1.9 10.3 -5.3 86 86 A T E -F 79 0C 4 -7,-1.2 -7,-2.7 -2,-0.3 2,-0.4 -0.901 9.4-159.0-118.6 146.6 4.1 7.2 -5.2 87 87 A S E -F 78 0C 41 -2,-0.4 2,-0.4 -9,-0.3 -9,-0.3 -0.943 5.3-171.8-125.6 146.5 3.6 3.7 -6.7 88 88 A A E -F 77 0C 2 -11,-2.8 -11,-1.9 -2,-0.4 2,-0.2 -0.953 26.3-123.6-141.9 119.2 5.1 0.3 -5.9 89 89 A T - 0 0 59 -2,-0.4 -71,-0.6 -13,-0.2 2,-0.5 -0.403 26.6-150.1 -62.2 125.5 4.6 -2.9 -7.9 90 90 A L E -a 18 0A 4 -73,-0.2 -15,-1.1 -2,-0.2 2,-0.5 -0.880 5.9-158.4-104.2 125.1 3.2 -5.6 -5.7 91 91 A T E -a 19 0A 58 -73,-2.4 -71,-2.5 -2,-0.5 2,-0.4 -0.892 5.4-157.5-106.0 124.1 4.1 -9.2 -6.4 92 92 A V E -a 20 0A 8 -2,-0.5 -71,-0.2 -21,-0.3 2,-0.2 -0.814 6.3-152.0-102.2 138.8 1.9 -12.0 -5.1 93 93 A K E -a 21 0A 81 -73,-1.8 -71,-2.5 -2,-0.4 2,-0.7 -0.629 23.3-104.9-104.6 164.7 3.1 -15.6 -4.6 94 94 A A - 0 0 74 -2,-0.2 -71,-0.0 -73,-0.2 -73,-0.0 -0.807 34.9-131.4 -94.1 113.9 1.2 -18.9 -4.7 95 95 A L - 0 0 66 -2,-0.7 2,-1.3 1,-0.1 -72,-0.0 -0.295 29.9-100.6 -62.6 143.8 0.6 -20.3 -1.2 96 96 A P + 0 0 117 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.511 43.1 176.2 -69.8 93.1 1.4 -24.0 -0.8 97 97 A S + 0 0 112 -2,-1.3 -2,-0.1 2,-0.1 -3,-0.0 -0.187 34.5 129.5 -92.0 41.7 -2.0 -25.7 -1.0 98 98 A G - 0 0 56 -2,-0.3 2,-0.4 1,-0.0 0, 0.0 -0.832 62.8-116.7-103.4 135.0 -0.5 -29.2 -0.8 99 99 A P - 0 0 127 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.512 37.0-112.4 -69.8 122.4 -1.7 -31.8 1.7 100 100 A S - 0 0 127 -2,-0.4 2,-0.3 1,-0.1 0, 0.0 -0.043 31.2-119.6 -50.3 155.4 0.9 -32.7 4.2 101 101 A S 0 0 125 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.797 360.0 360.0-104.2 144.7 2.3 -36.3 4.0 102 102 A G 0 0 132 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.987 360.0 360.0-130.2 360.0 2.1 -38.9 6.8