==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 15-FEB-07 2EDT . COMPND 2 MOLECULE: OBSCURIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.SEIMIYA,K IZUMI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6914.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 28.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 126 0, 0.0 3,-0.4 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 45.3 -6.9 20.2 2.2 2 2 A S + 0 0 116 1,-0.2 3,-0.1 2,-0.0 0, 0.0 -0.839 360.0 11.0-105.6 139.6 -8.4 22.8 4.7 3 3 A S S S+ 0 0 138 -2,-0.4 -1,-0.2 1,-0.1 2,-0.1 0.910 112.9 84.8 64.7 43.4 -6.5 24.0 7.8 4 4 A G S S- 0 0 66 -3,-0.4 2,-0.4 0, 0.0 -1,-0.1 -0.101 88.6 -50.2-136.2-124.8 -3.3 22.4 6.7 5 5 A S - 0 0 94 2,-0.2 -3,-0.0 -2,-0.1 0, 0.0 -0.971 49.2-117.4-135.2 119.7 -0.3 23.3 4.5 6 6 A S S S+ 0 0 139 -2,-0.4 -4,-0.0 0, 0.0 0, 0.0 -0.221 76.3 59.7 -53.1 135.5 -0.6 24.6 0.9 7 7 A G S S- 0 0 45 2,-0.0 -2,-0.2 75,-0.0 75,-0.0 -0.157 82.5 -82.9 118.9 146.2 1.0 22.2 -1.6 8 8 A P - 0 0 72 0, 0.0 2,-0.3 0, 0.0 74,-0.1 -0.014 49.6 -94.4 -69.8 179.4 0.6 18.6 -2.8 9 9 A A - 0 0 2 75,-0.1 74,-0.5 23,-0.0 2,-0.4 -0.724 30.6-155.9-100.8 150.1 2.1 15.5 -1.1 10 10 A K - 0 0 131 -2,-0.3 23,-2.0 72,-0.1 2,-0.4 -0.990 23.3-115.5-129.4 131.6 5.5 13.9 -2.0 11 11 A F B -A 32 0A 39 -2,-0.4 21,-0.3 21,-0.3 74,-0.1 -0.481 27.6-176.8 -66.2 118.3 6.5 10.3 -1.4 12 12 A T S S+ 0 0 81 19,-0.7 -1,-0.2 -2,-0.4 20,-0.2 0.867 85.1 6.7 -83.4 -40.5 9.4 10.3 1.1 13 13 A E S S- 0 0 135 18,-0.6 19,-0.1 3,-0.0 -2,-0.1 0.769 93.4-162.8-108.6 -46.0 10.0 6.5 1.0 14 14 A G - 0 0 10 17,-0.7 17,-0.2 -4,-0.1 15,-0.1 -0.082 34.2 -45.0 83.0 172.9 7.7 5.2 -1.7 15 15 A L - 0 0 18 15,-0.1 2,-0.3 64,-0.1 72,-0.1 -0.131 51.8-154.4 -70.6 171.9 6.5 1.7 -2.4 16 16 A R - 0 0 145 13,-0.1 72,-0.1 14,-0.0 13,-0.1 -0.946 21.5-106.7-155.0 129.7 8.7 -1.4 -2.4 17 17 A N + 0 0 106 -2,-0.3 2,-0.3 70,-0.1 73,-0.2 -0.105 48.7 159.7 -51.9 150.7 8.5 -4.8 -4.1 18 18 A E E -b 90 0B 19 71,-1.9 73,-1.5 10,-0.0 2,-0.3 -0.943 27.2-129.7-161.2 178.8 7.6 -7.7 -1.8 19 19 A E E +b 91 0B 122 -2,-0.3 2,-0.3 71,-0.3 73,-0.2 -0.840 20.8 167.0-135.7 172.2 6.3 -11.3 -1.8 20 20 A A E -b 92 0B 19 71,-2.4 73,-0.9 -2,-0.3 2,-0.3 -0.952 33.2 -87.5-168.1-177.1 3.6 -13.3 0.0 21 21 A V E > -b 93 0B 61 -2,-0.3 3,-1.8 71,-0.2 48,-0.2 -0.804 48.0 -91.6-110.6 152.2 1.7 -16.6 0.1 22 22 A E T 3 S+ 0 0 50 71,-3.0 48,-0.2 -2,-0.3 3,-0.1 -0.371 113.2 17.1 -61.7 130.6 -1.6 -17.5 -1.6 23 23 A G T 3 S+ 0 0 50 46,-1.7 45,-0.4 1,-0.3 -1,-0.3 0.137 104.3 110.8 93.8 -20.6 -4.6 -16.8 0.6 24 24 A A S < S- 0 0 42 -3,-1.8 45,-1.7 44,-0.2 2,-0.7 -0.162 75.7-105.1 -78.8 177.4 -2.5 -14.5 2.9 25 25 A T - 0 0 58 42,-0.2 42,-0.2 43,-0.1 -1,-0.1 -0.890 32.7-141.3-112.0 104.3 -2.9 -10.8 3.2 26 26 A A E -C 66 0C 3 40,-0.8 40,-0.5 -2,-0.7 2,-0.4 0.051 10.2-137.5 -52.9 169.2 -0.1 -8.8 1.5 27 27 A M E +C 65 0C 75 -8,-0.2 2,-0.5 38,-0.2 38,-0.2 -0.897 26.8 166.9-140.6 108.1 1.4 -5.7 3.2 28 28 A L E +C 64 0C 2 36,-2.0 36,-2.0 -2,-0.4 2,-0.3 -0.974 7.0 168.7-126.3 120.5 2.1 -2.5 1.2 29 29 A W E -C 63 0C 49 -2,-0.5 2,-0.3 34,-0.2 34,-0.2 -0.887 9.8-174.2-127.9 158.8 2.9 0.8 2.9 30 30 A C E -C 62 0C 0 32,-1.2 32,-2.1 -2,-0.3 2,-0.2 -0.954 14.1-141.7-156.1 132.7 4.2 4.2 1.7 31 31 A E E -C 61 0C 71 -2,-0.3 -19,-0.7 -17,-0.2 -17,-0.7 -0.551 17.4-163.3 -93.0 159.5 5.2 7.4 3.5 32 32 A L B -A 11 0A 4 28,-1.8 -21,-0.3 -21,-0.3 3,-0.1 -0.883 36.5-107.8-137.1 168.3 4.6 10.9 2.3 33 33 A S S S+ 0 0 78 -23,-2.0 2,-0.3 -2,-0.3 -22,-0.1 0.542 104.3 0.7 -73.5 -5.9 5.8 14.5 2.9 34 34 A K S S- 0 0 59 26,-0.2 2,-0.5 -24,-0.2 -1,-0.2 -0.950 92.9 -75.9-174.4 156.7 2.4 15.1 4.5 35 35 A V + 0 0 90 -2,-0.3 25,-0.2 -3,-0.1 -4,-0.0 -0.487 64.8 150.7 -66.0 114.0 -1.0 13.5 5.4 36 36 A A - 0 0 11 -2,-0.5 2,-0.6 23,-0.4 23,-0.1 -0.991 52.8 -93.6-147.0 152.5 -2.9 13.2 2.1 37 37 A P - 0 0 110 0, 0.0 45,-0.5 0, 0.0 2,-0.1 -0.534 46.5-165.6 -69.7 111.9 -5.6 10.9 0.6 38 38 A V - 0 0 25 -2,-0.6 2,-0.4 43,-0.1 43,-0.2 -0.443 11.9-140.4 -94.1 170.1 -3.8 8.3 -1.5 39 39 A E E -E 80 0D 126 41,-2.1 41,-2.6 -2,-0.1 2,-0.3 -0.923 8.8-151.6-138.0 110.5 -5.3 5.9 -4.2 40 40 A W E +E 79 0D 4 -2,-0.4 7,-0.9 39,-0.2 2,-0.3 -0.642 25.3 166.1 -83.0 133.5 -4.2 2.3 -4.5 41 41 A R E -EF 78 46D 121 37,-2.9 37,-3.1 -2,-0.3 2,-0.3 -0.952 31.5-146.8-143.6 161.8 -4.4 0.7 -7.9 42 42 A K E > - F 0 45D 42 3,-0.7 3,-2.8 -2,-0.3 35,-0.2 -0.726 52.0 -89.5-134.3 84.7 -3.2 -2.3 -9.8 43 43 A G T 3 S+ 0 0 43 -2,-0.3 -1,-0.2 1,-0.3 34,-0.0 -0.274 115.0 4.2 53.0-117.2 -2.5 -1.6 -13.5 44 44 A P T 3 S+ 0 0 136 0, 0.0 -1,-0.3 0, 0.0 2,-0.1 0.720 127.8 73.7 -69.8 -21.7 -5.8 -2.3 -15.4 45 45 A E E < S-F 42 0D 91 -3,-2.8 -3,-0.7 0, 0.0 2,-0.4 -0.270 73.8-138.9 -86.4 176.2 -7.5 -2.9 -12.0 46 46 A N E -F 41 0D 105 -5,-0.2 2,-0.2 -2,-0.1 -5,-0.2 -0.946 13.7-166.8-144.1 119.1 -8.6 -0.4 -9.4 47 47 A L + 0 0 11 -7,-0.9 2,-0.3 -2,-0.4 -7,-0.1 -0.644 14.6 158.6-102.4 161.1 -8.3 -0.8 -5.6 48 48 A R - 0 0 184 -2,-0.2 2,-1.1 -9,-0.1 5,-0.2 -0.975 54.5 -60.6-171.3 163.6 -9.8 1.3 -2.8 49 49 A D S S+ 0 0 124 -2,-0.3 2,-0.2 5,-0.1 5,-0.1 -0.349 84.6 124.0 -57.0 93.9 -10.8 1.3 0.8 50 50 A G S S- 0 0 39 3,-1.6 5,-0.3 -2,-1.1 -1,-0.0 -0.530 73.4 -76.5-134.7-158.4 -13.3 -1.6 0.7 51 51 A D S S+ 0 0 160 -2,-0.2 16,-0.1 1,-0.1 -1,-0.1 0.993 127.2 33.7 -72.2 -68.0 -14.1 -4.9 2.3 52 52 A R S S+ 0 0 123 1,-0.2 15,-2.4 14,-0.1 2,-0.8 0.784 118.2 64.1 -59.1 -27.3 -11.6 -7.2 0.6 53 53 A Y E S-D 66 0C 28 -5,-0.2 -3,-1.6 13,-0.2 2,-1.2 -0.850 73.3-162.9-104.8 101.8 -9.2 -4.3 0.6 54 54 A I E -D 65 0C 60 11,-2.4 11,-1.6 -2,-0.8 2,-0.3 -0.690 16.6-177.9 -86.4 94.3 -8.4 -3.2 4.2 55 55 A L E +D 64 0C 42 -2,-1.2 2,-0.3 -5,-0.3 9,-0.2 -0.692 3.2 177.2 -94.6 146.2 -6.9 0.3 3.8 56 56 A R E -D 63 0C 157 7,-2.6 7,-2.2 -2,-0.3 2,-0.3 -0.991 14.2-169.9-147.3 152.1 -5.6 2.3 6.7 57 57 A Q E +D 62 0C 80 -2,-0.3 5,-0.2 5,-0.2 3,-0.1 -0.893 13.3 172.7-149.1 114.0 -3.9 5.7 7.3 58 58 A E S S- 0 0 172 3,-1.3 2,-0.4 -2,-0.3 4,-0.1 0.287 71.6 -72.4-100.9 7.7 -2.3 6.9 10.5 59 59 A G S S+ 0 0 13 2,-0.7 -23,-0.4 -23,-0.1 -25,-0.1 -0.958 111.1 9.7 145.5-124.2 -0.9 10.0 8.9 60 60 A T S S+ 0 0 59 -2,-0.4 -28,-1.8 -25,-0.2 2,-0.4 0.496 119.9 74.1 -71.3 -1.8 1.9 10.5 6.4 61 61 A R E -C 31 0C 109 -30,-0.2 -3,-1.3 -32,-0.0 -2,-0.7 -0.954 66.0-162.3-118.4 130.7 1.9 6.7 6.2 62 62 A C E -CD 30 57C 1 -32,-2.1 -32,-1.2 -2,-0.4 2,-0.4 -0.947 5.6-159.5-115.6 121.3 -0.7 4.7 4.3 63 63 A E E -CD 29 56C 30 -7,-2.2 -7,-2.6 -2,-0.5 2,-0.4 -0.823 4.6-165.3-101.6 135.8 -1.1 0.9 5.0 64 64 A L E -CD 28 55C 0 -36,-2.0 -36,-2.0 -2,-0.4 2,-0.5 -0.978 3.8-171.8-124.2 128.0 -2.7 -1.4 2.4 65 65 A Q E -CD 27 54C 63 -11,-1.6 -11,-2.4 -2,-0.4 2,-0.9 -0.966 9.5-157.5-122.8 119.1 -3.9 -4.9 3.2 66 66 A I E -CD 26 53C 1 -40,-0.5 -40,-0.8 -2,-0.5 2,-0.6 -0.798 12.2-153.7 -97.8 98.9 -5.2 -7.2 0.5 67 67 A C S S+ 0 0 64 -15,-2.4 -42,-0.2 -2,-0.9 -43,-0.1 -0.598 75.7 26.3 -74.6 116.4 -7.4 -9.9 2.0 68 68 A G S S- 0 0 37 -2,-0.6 -1,-0.2 -44,-0.4 -44,-0.2 0.895 78.8-158.6 96.4 66.5 -7.3 -13.0 -0.1 69 69 A L + 0 0 6 -45,-1.7 -46,-1.7 -48,-0.2 2,-0.3 -0.374 17.9 167.1 -74.5 154.4 -4.1 -13.1 -2.0 70 70 A A >> - 0 0 31 -48,-0.2 4,-1.2 -47,-0.1 3,-0.5 -0.985 55.2 -85.8-162.5 160.9 -3.7 -15.2 -5.2 71 71 A M T 34 S+ 0 0 99 -2,-0.3 3,-0.2 1,-0.3 21,-0.2 0.799 126.8 57.9 -39.4 -34.6 -1.5 -15.9 -8.2 72 72 A A T 34 S+ 0 0 70 1,-0.2 -1,-0.3 3,-0.0 -3,-0.1 0.975 93.3 61.3 -62.8 -57.8 -3.4 -12.9 -9.8 73 73 A D T <4 S+ 0 0 14 -3,-0.5 2,-0.4 -5,-0.1 17,-0.2 0.817 83.7 98.5 -37.9 -38.8 -2.5 -10.4 -7.1 74 74 A A < + 0 0 39 -4,-1.2 2,-0.2 -3,-0.2 17,-0.2 -0.381 64.1 69.2 -58.4 112.3 1.1 -11.0 -8.1 75 75 A G S S- 0 0 31 -2,-0.4 15,-0.7 15,-0.4 2,-0.4 -0.622 92.1 -32.8-179.3-117.3 2.0 -8.2 -10.4 76 76 A E E - G 0 89D 92 13,-0.2 2,-0.4 -2,-0.2 13,-0.2 -0.967 44.1-161.8-142.0 122.4 2.5 -4.4 -10.0 77 77 A Y E - G 0 88D 4 11,-0.9 11,-2.2 -2,-0.4 2,-0.4 -0.854 6.9-163.4-106.3 137.9 0.8 -2.1 -7.6 78 78 A L E -EG 41 87D 39 -37,-3.1 -37,-2.9 -2,-0.4 2,-0.5 -0.931 6.3-157.3-121.5 144.4 0.7 1.7 -7.9 79 79 A C E -EG 40 86D 0 7,-2.3 7,-1.5 -2,-0.4 2,-0.4 -0.941 8.3-159.0-125.0 110.4 -0.1 4.4 -5.3 80 80 A V E +EG 39 85D 35 -41,-2.6 -41,-2.1 -2,-0.5 2,-0.3 -0.731 16.7 168.7 -90.5 132.3 -1.3 7.8 -6.5 81 81 A C E > - G 0 84D 1 3,-2.5 3,-2.0 -2,-0.4 2,-0.5 -0.887 57.6 -50.6-147.6 111.5 -1.0 10.7 -4.2 82 82 A G T 3 S- 0 0 48 -45,-0.5 -72,-0.1 -2,-0.3 -2,-0.0 -0.497 119.6 -21.8 67.3-115.4 -1.4 14.4 -5.1 83 83 A Q T 3 S+ 0 0 148 -74,-0.5 -1,-0.3 -2,-0.5 2,-0.2 0.324 128.6 69.2-109.7 3.6 0.7 15.1 -8.2 84 84 A E E < -G 81 0D 105 -3,-2.0 -3,-2.5 -75,-0.3 2,-0.3 -0.700 55.9-177.2-117.8 170.7 3.1 12.2 -7.7 85 85 A R E -G 80 0D 178 -5,-0.2 2,-0.3 -2,-0.2 -5,-0.2 -0.953 6.7-159.8-167.1 147.0 2.8 8.4 -7.9 86 86 A T E -G 79 0D 32 -7,-1.5 -7,-2.3 -2,-0.3 2,-0.3 -0.851 6.1-150.5-129.4 165.4 4.9 5.2 -7.3 87 87 A S E -G 78 0D 55 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.949 11.1-177.7-136.5 156.1 4.8 1.6 -8.3 88 88 A A E -G 77 0D 6 -11,-2.2 -11,-0.9 -2,-0.3 2,-0.5 -0.874 24.0-120.2-143.9 175.5 6.0 -1.7 -6.9 89 89 A T E -G 76 0D 71 -2,-0.3 -71,-1.9 -13,-0.2 2,-0.3 -0.956 23.2-164.1-129.0 114.3 6.2 -5.5 -7.7 90 90 A L E -b 18 0B 4 -15,-0.7 2,-0.4 -2,-0.5 -15,-0.4 -0.685 5.0-152.8 -96.5 149.7 4.4 -8.1 -5.5 91 91 A T E -b 19 0B 62 -73,-1.5 -71,-2.4 -2,-0.3 2,-0.3 -0.983 4.1-154.5-126.6 129.6 5.1 -11.8 -5.6 92 92 A I E -b 20 0B 14 -2,-0.4 2,-0.5 -73,-0.2 -71,-0.2 -0.758 5.2-148.1-102.5 148.0 2.7 -14.6 -4.7 93 93 A R E -b 21 0B 170 -73,-0.9 -71,-3.0 -2,-0.3 -22,-0.0 -0.952 23.8-118.6-120.0 115.3 3.6 -18.0 -3.4 94 94 A A - 0 0 65 -2,-0.5 -24,-0.0 -73,-0.2 -73,-0.0 -0.245 39.9-107.8 -51.2 124.6 1.4 -21.0 -4.3 95 95 A L - 0 0 87 1,-0.2 -1,-0.1 3,-0.0 -72,-0.1 -0.122 21.5-116.1 -54.2 151.0 0.1 -22.5 -1.1 96 96 A P + 0 0 83 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.449 60.5 152.3 -69.7 1.4 1.5 -25.9 0.0 97 97 A S + 0 0 112 1,-0.2 3,-0.0 3,-0.1 -2,-0.0 -0.077 70.0 5.2 -38.4 102.0 -2.0 -27.3 -0.4 98 98 A G S S+ 0 0 70 0, 0.0 2,-1.2 0, 0.0 -1,-0.2 -0.834 114.3 65.9 125.6 -95.8 -1.1 -30.9 -1.3 99 99 A P S S- 0 0 102 0, 0.0 2,-0.9 0, 0.0 0, 0.0 -0.520 75.3-145.1 -69.7 95.9 2.7 -31.7 -1.0 100 100 A S + 0 0 109 -2,-1.2 2,-0.3 2,-0.1 -3,-0.1 -0.501 50.2 122.4 -67.1 103.6 3.4 -31.4 2.7 101 101 A S 0 0 113 -2,-0.9 0, 0.0 -5,-0.1 0, 0.0 -0.833 360.0 360.0-167.8 125.1 6.9 -30.0 2.8 102 102 A G 0 0 133 -2,-0.3 -2,-0.1 -6,-0.0 0, 0.0 -0.243 360.0 360.0 161.1 360.0 8.5 -26.9 4.2