==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 15-FEB-07 2EE1 . COMPND 2 MOLECULE: CHROMODOMAIN HELICASE-DNA-BINDING PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.SATO,N.TOCHIO,S.KOSHIBA,S.WATANABE,T.HARADA,T.KIGAWA, . 64 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5243.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 34 53.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 15.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 138 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -99.8 -12.4 -14.7 -0.3 2 2 A S - 0 0 117 2,-0.0 2,-0.2 50,-0.0 50,-0.0 -0.983 360.0-171.9-138.4 124.9 -12.6 -11.5 -2.5 3 3 A S + 0 0 122 -2,-0.4 2,-0.1 4,-0.0 0, 0.0 -0.598 28.7 105.0-108.8 171.3 -15.2 -10.8 -5.2 4 4 A G - 0 0 70 -2,-0.2 3,-0.2 3,-0.1 -2,-0.0 -0.015 49.6-136.3 125.4 130.1 -15.5 -8.0 -7.8 5 5 A S S S+ 0 0 135 1,-0.2 2,-0.9 2,-0.1 -1,-0.0 0.965 96.7 45.9 -75.7 -56.8 -14.9 -7.6 -11.5 6 6 A S S S+ 0 0 110 1,-0.1 -1,-0.2 0, 0.0 2,-0.0 -0.787 88.4 89.1 -93.9 104.2 -13.1 -4.3 -11.5 7 7 A G S S- 0 0 39 -2,-0.9 43,-0.1 -3,-0.2 -1,-0.1 -0.053 78.9 -37.0-150.7-103.2 -10.4 -4.3 -8.8 8 8 A K - 0 0 89 1,-0.1 43,-0.0 -2,-0.0 0, 0.0 -0.981 49.0-111.7-143.7 154.3 -6.8 -5.4 -8.9 9 9 A P - 0 0 52 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.126 25.7-118.3 -69.7-170.0 -4.6 -8.1 -10.5 10 10 A E S S+ 0 0 178 1,-0.1 42,-0.0 3,-0.0 -2,-0.0 0.736 106.4 62.5-103.7 -33.8 -2.9 -11.0 -8.7 11 11 A W S S+ 0 0 155 2,-0.0 2,-0.7 25,-0.0 25,-0.3 0.786 82.1 96.8 -63.2 -27.3 0.7 -10.1 -9.6 12 12 A M + 0 0 26 23,-0.1 40,-0.4 24,-0.1 2,-0.3 -0.533 56.9 168.9 -69.1 110.2 0.3 -6.9 -7.6 13 13 A M - 0 0 72 -2,-0.7 2,-0.6 38,-0.1 22,-0.5 -0.779 35.9-128.4-120.9 165.8 1.7 -7.6 -4.2 14 14 A I - 0 0 9 -2,-0.3 20,-0.2 20,-0.2 3,-0.2 -0.817 17.3-174.3-118.9 91.2 2.6 -5.4 -1.1 15 15 A H - 0 0 58 18,-1.5 2,-0.3 -2,-0.6 -1,-0.2 0.937 66.9 -44.4 -44.8 -61.9 6.1 -6.1 0.1 16 16 A R - 0 0 145 17,-0.3 2,-0.8 15,-0.1 17,-0.4 -0.883 59.7 -91.6-175.0 142.3 5.8 -3.9 3.1 17 17 A I - 0 0 14 -2,-0.3 15,-0.2 1,-0.2 3,-0.1 -0.455 35.0-170.4 -63.6 104.1 4.4 -0.5 4.1 18 18 A L - 0 0 28 13,-2.2 2,-0.3 -2,-0.8 -1,-0.2 0.938 60.8 -42.7 -61.5 -48.9 7.5 1.8 3.7 19 19 A N E -A 31 0A 78 12,-0.5 12,-2.6 -3,-0.1 2,-0.3 -0.954 53.7-116.5-166.9-179.1 5.8 4.8 5.3 20 20 A H E -A 30 0A 61 -2,-0.3 2,-0.3 10,-0.3 10,-0.2 -0.960 21.0-179.6-135.6 153.0 2.6 6.8 5.6 21 21 A S E -A 29 0A 57 8,-2.5 8,-3.1 -2,-0.3 2,-0.7 -0.985 20.6-139.4-154.2 141.2 1.6 10.4 4.8 22 22 A V E -A 28 0A 77 -2,-0.3 6,-0.2 6,-0.2 5,-0.1 -0.897 24.5-137.1-107.4 112.2 -1.6 12.5 5.1 23 23 A D > - 0 0 44 4,-1.5 3,-0.9 -2,-0.7 -2,-0.0 -0.083 32.8 -98.5 -59.1 163.5 -2.3 14.8 2.2 24 24 A K T 3 S+ 0 0 210 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.781 125.8 60.2 -55.2 -27.0 -3.5 18.4 2.8 25 25 A K T 3 S- 0 0 180 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.882 115.9-114.8 -69.4 -39.5 -6.9 17.0 2.0 26 26 A G < + 0 0 39 -3,-0.9 -2,-0.1 1,-0.4 -1,-0.1 -0.021 68.8 135.2 129.1 -30.6 -6.8 14.6 4.9 27 27 A H - 0 0 111 -5,-0.1 -4,-1.5 1,-0.1 -1,-0.4 -0.292 55.9-126.4 -54.2 124.0 -6.9 11.2 3.1 28 28 A V E -A 22 0A 29 -6,-0.2 19,-2.1 -3,-0.1 2,-0.3 -0.602 26.5-162.1 -78.4 129.6 -4.2 9.0 4.6 29 29 A H E -AB 21 46A 43 -8,-3.1 -8,-2.5 -2,-0.4 2,-0.5 -0.860 7.5-151.8-114.1 148.2 -1.8 7.5 2.1 30 30 A Y E -AB 20 45A 13 15,-3.0 2,-1.6 -2,-0.3 15,-1.5 -0.963 20.2-128.5-123.8 117.5 0.5 4.5 2.6 31 31 A L E -AB 19 44A 23 -12,-2.6 -13,-2.2 -2,-0.5 -12,-0.5 -0.430 34.3-163.0 -64.1 89.8 3.8 4.2 0.7 32 32 A I E - B 0 43A 0 -2,-1.6 11,-1.5 11,-0.8 2,-0.7 -0.561 10.5-148.5 -79.5 139.4 3.3 0.8 -0.8 33 33 A K - 0 0 43 -17,-0.4 -18,-1.5 -2,-0.2 2,-0.3 -0.826 15.0-137.0-112.1 93.1 6.4 -1.1 -2.1 34 34 A W > - 0 0 18 -2,-0.7 3,-0.8 -20,-0.2 -20,-0.2 -0.267 12.1-141.3 -50.3 104.3 5.4 -3.3 -5.0 35 35 A R T 3 S+ 0 0 150 -22,-0.5 -1,-0.2 -2,-0.3 -21,-0.1 0.850 102.9 51.6 -34.5 -51.3 7.4 -6.5 -4.2 36 36 A D T 3 S+ 0 0 116 -25,-0.3 -1,-0.3 -23,-0.1 -2,-0.1 0.931 108.0 59.7 -54.9 -49.9 8.0 -6.8 -8.0 37 37 A L S < S- 0 0 42 -3,-0.8 5,-0.0 1,-0.1 0, 0.0 -0.496 91.3-113.6 -82.6 151.5 9.3 -3.2 -8.2 38 38 A P > - 0 0 64 0, 0.0 4,-0.6 0, 0.0 -4,-0.1 0.086 32.9 -96.4 -69.8-173.0 12.3 -2.0 -6.2 39 39 A Y T 4 S+ 0 0 136 1,-0.2 3,-0.1 2,-0.2 -5,-0.1 0.796 123.8 56.0 -78.5 -30.1 12.3 0.6 -3.4 40 40 A D T 4 S+ 0 0 157 1,-0.2 -1,-0.2 -7,-0.0 -3,-0.0 0.691 109.7 47.1 -74.4 -18.9 13.2 3.4 -5.8 41 41 A Q T 4 S+ 0 0 118 -7,-0.1 -1,-0.2 -3,-0.1 -2,-0.2 0.613 84.9 125.9 -95.5 -16.7 10.2 2.6 -7.9 42 42 A A < - 0 0 23 -4,-0.6 2,-0.3 -3,-0.1 -9,-0.2 0.086 45.4-154.1 -39.2 154.5 7.8 2.4 -5.0 43 43 A S E -B 32 0A 58 -11,-1.5 -11,-0.8 -13,-0.1 2,-0.5 -0.905 17.9-104.5-135.5 163.0 4.7 4.6 -5.3 44 44 A W E -B 31 0A 108 -2,-0.3 2,-0.5 -13,-0.2 -13,-0.2 -0.790 34.0-173.0 -93.0 123.2 2.2 6.3 -2.9 45 45 A E E -B 30 0A 35 -15,-1.5 -15,-3.0 -2,-0.5 -2,-0.0 -0.966 22.1-123.9-120.9 122.5 -1.2 4.6 -2.6 46 46 A S E > -B 29 0A 26 -2,-0.5 3,-0.6 -17,-0.3 -17,-0.3 0.053 31.2-104.2 -52.6 169.0 -4.0 6.2 -0.7 47 47 A E T 3 S+ 0 0 80 -19,-2.1 -1,-0.1 1,-0.2 -18,-0.1 0.306 118.1 64.1 -81.1 10.2 -5.7 4.3 2.1 48 48 A D T 3 S+ 0 0 127 -20,-0.1 -1,-0.2 2,-0.1 -19,-0.1 0.705 71.6 111.8-102.3 -29.0 -8.6 3.7 -0.2 49 49 A V < - 0 0 36 -3,-0.6 2,-0.8 1,-0.1 -4,-0.0 -0.163 66.9-132.1 -48.7 134.8 -6.8 1.5 -2.8 50 50 A E + 0 0 124 -43,-0.1 2,-0.3 4,-0.1 -1,-0.1 -0.830 41.1 155.7 -98.3 106.5 -8.0 -2.1 -2.7 51 51 A I > - 0 0 16 -2,-0.8 3,-2.3 1,-0.0 4,-0.3 -0.885 52.5 -71.5-128.5 160.0 -5.0 -4.5 -2.6 52 52 A Q T 3 S- 0 0 120 -40,-0.4 -38,-0.1 -2,-0.3 -1,-0.0 -0.226 116.7 -15.1 -50.6 126.9 -4.4 -8.1 -1.5 53 53 A D T 3> S+ 0 0 93 1,-0.1 4,-1.9 3,-0.1 -1,-0.3 0.842 92.1 149.4 41.9 40.5 -4.5 -8.1 2.3 54 54 A Y H <> + 0 0 6 -3,-2.3 4,-2.1 1,-0.2 5,-0.2 0.890 66.6 52.9 -68.3 -40.6 -4.1 -4.4 2.2 55 55 A D H > S+ 0 0 121 -4,-0.3 4,-2.2 1,-0.2 -1,-0.2 0.859 107.8 53.0 -63.2 -36.3 -6.1 -3.8 5.4 56 56 A L H > S+ 0 0 105 2,-0.2 4,-2.8 1,-0.2 -2,-0.2 0.969 107.9 47.9 -63.9 -55.4 -3.8 -6.3 7.2 57 57 A F H X S+ 0 0 64 -4,-1.9 4,-2.4 1,-0.2 5,-0.3 0.930 113.8 47.7 -51.1 -51.8 -0.5 -4.6 6.2 58 58 A K H X S+ 0 0 22 -4,-2.1 4,-1.6 1,-0.2 -1,-0.2 0.904 112.6 49.3 -57.5 -43.6 -1.9 -1.2 7.2 59 59 A Q H X S+ 0 0 128 -4,-2.2 4,-2.0 -5,-0.2 -1,-0.2 0.870 115.1 45.6 -64.4 -37.7 -3.1 -2.6 10.5 60 60 A S H X S+ 0 0 67 -4,-2.8 4,-2.9 2,-0.2 -2,-0.2 0.998 107.9 51.3 -68.6 -69.2 0.3 -4.2 11.1 61 61 A Y H < S+ 0 0 74 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.834 114.1 49.6 -35.8 -44.9 2.6 -1.4 10.3 62 62 A W H < S+ 0 0 118 -4,-1.6 -1,-0.2 -5,-0.3 -2,-0.2 0.994 110.9 44.5 -60.9 -66.5 0.6 0.7 12.6 63 63 A N H < 0 0 125 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.889 360.0 360.0 -45.2 -47.3 0.5 -1.6 15.6 64 64 A H < 0 0 201 -4,-2.9 -1,-0.2 -5,-0.1 -2,-0.2 0.665 360.0 360.0 -98.9 360.0 4.2 -2.2 15.1