==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 15-FEB-07 2EEH . COMPND 2 MOLECULE: PDZ DOMAIN-CONTAINING PROTEIN 7; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.N.NIRAULA,N.TOCHIO,T.TOMIZAWA,K.KOSHIBA,M.INOUE,T.KIGAWA, . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7201.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 51.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 24.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 164.4 -16.8 -13.2 -32.4 2 2 A S - 0 0 125 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.925 360.0-161.0-109.3 119.2 -14.6 -13.7 -29.3 3 3 A S - 0 0 127 -2,-0.6 2,-0.2 1,-0.0 0, 0.0 -0.727 10.8-134.1 -99.1 147.9 -15.5 -16.6 -27.0 4 4 A G + 0 0 73 -2,-0.3 2,-0.2 0, 0.0 3,-0.1 -0.492 26.3 165.9 -95.9 167.4 -14.4 -16.9 -23.5 5 5 A S - 0 0 115 1,-0.6 -2,-0.0 -2,-0.2 0, 0.0 -0.758 47.0 -2.0 178.7 132.8 -13.0 -20.0 -21.7 6 6 A S S S- 0 0 121 -2,-0.2 -1,-0.6 2,-0.0 0, 0.0 0.326 87.5 -71.3 60.8 160.0 -11.1 -20.7 -18.4 7 7 A G - 0 0 75 -3,-0.1 2,-0.3 1,-0.0 -2,-0.1 0.173 48.8-156.0 -68.6-167.0 -10.1 -17.9 -16.0 8 8 A S - 0 0 101 84,-0.0 2,-0.1 0, 0.0 84,-0.1 -0.972 30.7 -70.3-168.4 162.8 -7.4 -15.4 -16.6 9 9 A D - 0 0 89 -2,-0.3 2,-0.3 84,-0.1 84,-0.2 -0.398 53.7-178.2 -63.9 134.4 -4.9 -13.1 -14.8 10 10 A I E -A 92 0A 116 82,-0.8 82,-1.4 -2,-0.1 2,-0.3 -0.932 26.0-111.5-135.0 157.5 -6.7 -10.2 -13.2 11 11 A I E -A 91 0A 72 -2,-0.3 2,-0.4 80,-0.2 80,-0.2 -0.630 27.5-134.3 -89.8 147.9 -5.6 -7.1 -11.2 12 12 A H - 0 0 55 78,-1.8 2,-0.5 -2,-0.3 78,-0.4 -0.827 10.6-145.6-104.6 141.6 -6.4 -6.7 -7.5 13 13 A S + 0 0 95 -2,-0.4 2,-0.3 76,-0.2 76,-0.1 -0.918 26.1 161.7-110.2 129.5 -7.7 -3.6 -6.0 14 14 A V E -B 88 0B 10 74,-0.9 74,-0.8 -2,-0.5 2,-0.5 -0.989 25.3-153.4-145.3 150.0 -6.7 -2.5 -2.5 15 15 A R E -B 87 0B 181 37,-0.6 2,-0.4 -2,-0.3 72,-0.2 -0.917 13.8-170.7-130.7 105.1 -6.8 0.7 -0.5 16 16 A V E -B 86 0B 2 70,-1.0 70,-2.2 -2,-0.5 2,-0.2 -0.754 13.7-140.4 -96.6 141.1 -4.3 1.1 2.4 17 17 A E - 0 0 105 -2,-0.4 8,-0.3 68,-0.2 68,-0.1 -0.530 24.1 -97.5 -96.3 164.8 -4.6 4.0 4.8 18 18 A K - 0 0 116 66,-0.3 -1,-0.1 -2,-0.2 66,-0.1 -0.183 36.2-145.6 -73.6 171.3 -1.8 6.1 6.3 19 19 A S - 0 0 60 1,-0.1 3,-0.1 62,-0.1 5,-0.1 -0.937 16.5-132.2-139.3 160.3 -0.3 5.5 9.7 20 20 A P S S- 0 0 130 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.974 86.9 -10.2 -75.0 -60.4 1.2 7.5 12.6 21 21 A A S S+ 0 0 88 2,-0.1 2,-0.0 3,-0.0 0, 0.0 -0.995 100.6 56.1-144.1 145.5 4.3 5.5 13.2 22 22 A G S S- 0 0 59 -2,-0.3 3,-0.1 -3,-0.1 -3,-0.0 0.177 88.8 -59.6 106.5 136.0 5.7 2.2 12.0 23 23 A R S S- 0 0 210 2,-0.1 -2,-0.1 1,-0.0 4,-0.1 0.100 82.6 -63.5 -38.8 156.3 6.4 0.8 8.6 24 24 A L - 0 0 23 1,-0.2 20,-0.3 2,-0.1 -6,-0.1 0.073 58.6 -96.2 -41.0 157.9 3.4 0.6 6.3 25 25 A G S S+ 0 0 9 -8,-0.3 19,-1.5 18,-0.1 2,-0.3 0.698 114.0 50.6 -53.4 -19.4 0.6 -1.8 7.5 26 26 A F E S-C 43 0B 5 17,-0.2 2,-0.5 23,-0.1 17,-0.3 -0.876 82.3-129.3-122.4 154.9 2.3 -4.2 5.1 27 27 A S E -C 42 0B 39 15,-4.0 14,-3.6 -2,-0.3 15,-1.1 -0.908 22.6-164.6-107.6 125.9 5.9 -5.3 4.7 28 28 A V E -C 40 0B 25 -2,-0.5 2,-0.3 12,-0.3 12,-0.3 -0.767 2.6-154.5-107.9 153.8 7.5 -5.3 1.3 29 29 A R E +C 39 0B 116 10,-4.0 10,-2.1 -2,-0.3 -2,-0.0 -0.937 50.8 17.7-128.7 150.9 10.7 -7.0 0.1 30 30 A G + 0 0 35 -2,-0.3 2,-0.2 8,-0.2 9,-0.1 -0.067 53.6 174.8 81.2 174.0 13.1 -6.3 -2.6 31 31 A G >> - 0 0 15 41,-0.1 2,-0.9 7,-0.1 6,-0.8 -0.752 50.6 -9.0-175.6-135.7 13.7 -3.1 -4.6 32 32 A S T 45S+ 0 0 74 -2,-0.2 40,-0.1 1,-0.2 41,-0.1 -0.813 104.2 68.2 -94.8 105.8 16.0 -1.7 -7.2 33 33 A E T 45S+ 0 0 191 -2,-0.9 -1,-0.2 39,-0.0 39,-0.0 0.007 103.3 26.7-174.8 -59.9 18.9 -4.1 -7.7 34 34 A H T 45S- 0 0 179 -3,-0.3 -2,-0.1 3,-0.1 -4,-0.0 0.900 104.8-109.4 -87.5 -50.4 17.9 -7.4 -9.3 35 35 A G T <5S+ 0 0 58 -4,-0.6 -3,-0.1 2,-0.1 35,-0.1 0.718 80.6 109.8 116.0 65.2 14.9 -6.2 -11.2 36 36 A L < - 0 0 52 -5,-0.7 2,-0.4 1,-0.2 -4,-0.1 0.589 62.0-140.0-128.1 -45.2 11.6 -7.5 -9.7 37 37 A G - 0 0 2 -6,-0.8 2,-0.5 34,-0.1 -1,-0.2 -0.963 51.2 -20.3 120.5-132.6 9.9 -4.6 -8.1 38 38 A I E - D 0 60B 0 22,-1.0 22,-1.0 30,-0.6 2,-0.4 -0.979 59.1-177.1-123.6 121.2 8.1 -4.6 -4.8 39 39 A F E -CD 29 59B 44 -10,-2.1 -10,-4.0 -2,-0.5 20,-0.3 -0.932 25.7-120.1-120.3 142.2 6.8 -7.8 -3.3 40 40 A V E +C 28 0B 10 18,-2.6 17,-0.4 -2,-0.4 18,-0.3 -0.560 33.7 164.7 -79.5 141.2 4.8 -8.3 -0.1 41 41 A S E + 0 0 56 -14,-3.6 2,-0.3 1,-0.5 -13,-0.2 0.679 63.9 6.8-119.9 -51.6 6.4 -10.4 2.6 42 42 A K E -C 27 0B 110 -15,-1.1 -15,-4.0 14,-0.1 -1,-0.5 -0.888 56.3-148.4-134.1 163.9 4.4 -9.8 5.8 43 43 A V E -C 26 0B 13 -2,-0.3 -17,-0.2 -17,-0.3 13,-0.1 -0.910 28.2-118.3-140.0 108.2 1.3 -7.9 6.7 44 44 A E > - 0 0 99 -19,-1.5 3,-0.8 -2,-0.4 6,-0.4 0.069 38.5-102.0 -39.0 152.0 1.0 -6.3 10.2 45 45 A E T 3 S+ 0 0 124 1,-0.2 -1,-0.1 4,-0.1 3,-0.1 -0.556 98.1 1.9 -83.8 147.7 -1.8 -7.6 12.3 46 46 A G T 3 S+ 0 0 73 -2,-0.2 -1,-0.2 1,-0.1 2,-0.1 0.808 103.7 141.2 45.6 34.7 -5.1 -5.7 12.7 47 47 A S S <> S- 0 0 16 -3,-0.8 4,-1.0 -22,-0.1 -1,-0.1 -0.374 70.4-106.2 -97.3 178.4 -3.5 -3.2 10.4 48 48 A S H > S+ 0 0 47 2,-0.2 4,-3.0 1,-0.2 6,-0.2 0.787 118.1 57.6 -74.5 -29.3 -5.0 -1.2 7.5 49 49 A A H >>S+ 0 0 0 2,-0.2 5,-2.1 1,-0.2 4,-1.8 0.972 104.2 48.6 -64.2 -56.7 -3.3 -3.4 5.0 50 50 A E H 45S+ 0 0 95 -6,-0.4 -1,-0.2 1,-0.3 -2,-0.2 0.824 119.2 42.1 -52.4 -33.8 -4.9 -6.6 6.3 51 51 A R H <5S+ 0 0 225 -4,-1.0 -1,-0.3 1,-0.2 -2,-0.2 0.828 107.0 59.5 -81.9 -35.6 -8.2 -4.7 6.1 52 52 A A H <5S- 0 0 22 -4,-3.0 -37,-0.6 2,-0.1 -2,-0.2 0.740 125.8-102.5 -63.9 -22.8 -7.4 -3.0 2.8 53 53 A G T <5S+ 0 0 51 -4,-1.8 2,-0.3 1,-0.4 -3,-0.2 0.257 78.4 138.6 116.3 -6.7 -7.2 -6.6 1.5 54 54 A L < + 0 0 1 -5,-2.1 -1,-0.4 -6,-0.2 2,-0.2 -0.555 23.6 157.3 -73.8 129.9 -3.4 -6.7 1.4 55 55 A C - 0 0 58 -2,-0.3 2,-0.3 -3,-0.1 3,-0.2 -0.792 46.0 -69.9-140.8-178.6 -2.0 -10.1 2.6 56 56 A V S S+ 0 0 84 -2,-0.2 -15,-0.1 1,-0.2 -14,-0.1 -0.591 106.4 48.4 -81.2 139.7 1.0 -12.2 2.4 57 57 A G S S+ 0 0 55 -17,-0.4 2,-0.3 1,-0.4 -1,-0.2 0.793 86.6 107.8 99.8 40.4 1.7 -13.9 -1.0 58 58 A D - 0 0 30 -18,-0.3 -18,-2.6 -3,-0.2 2,-0.5 -0.974 53.9-144.9-145.1 155.5 1.3 -10.9 -3.3 59 59 A K E -D 39 0B 49 -2,-0.3 32,-0.9 -20,-0.3 2,-0.7 -0.983 16.9-136.1-128.4 120.3 3.5 -8.6 -5.4 60 60 A I E +DE 38 90B 0 -22,-1.0 -22,-1.0 -2,-0.5 30,-0.2 -0.648 27.1 170.8 -77.4 114.6 2.8 -5.0 -5.8 61 61 A T E + 0 0 13 28,-1.8 7,-2.1 -2,-0.7 2,-0.3 0.756 68.6 4.7 -92.7 -31.2 3.3 -4.1 -9.5 62 62 A E E -FE 67 89B 77 27,-1.3 27,-3.0 5,-0.3 -1,-0.3 -0.985 60.6-176.2-152.6 155.9 1.8 -0.6 -9.3 63 63 A V E > S+FE 66 88B 2 3,-2.7 3,-1.5 -2,-0.3 25,-0.3 -0.980 72.6 0.6-156.2 144.1 0.5 1.8 -6.7 64 64 A N T 3 S- 0 0 72 23,-1.0 24,-0.1 1,-0.3 3,-0.1 0.755 126.9 -66.3 47.5 25.0 -1.1 5.3 -6.7 65 65 A G T 3 S+ 0 0 43 22,-0.6 -1,-0.3 1,-0.3 2,-0.3 -0.082 111.8 123.4 89.7 -33.8 -0.6 4.9 -10.4 66 66 A L E < -F 63 0B 105 -3,-1.5 -3,-2.7 -4,-0.1 2,-0.3 -0.454 63.7-129.5 -64.4 124.0 3.1 4.9 -10.0 67 67 A S E -F 62 0B 74 -2,-0.3 3,-0.3 -5,-0.2 -5,-0.3 -0.617 20.8-171.1 -79.7 131.9 4.6 1.8 -11.5 68 68 A L + 0 0 6 -7,-2.1 -30,-0.6 -2,-0.3 -6,-0.1 -0.274 54.6 110.2-115.6 43.1 6.9 -0.1 -9.2 69 69 A E S S+ 0 0 115 -32,-0.2 -1,-0.2 1,-0.2 -7,-0.1 0.584 99.9 10.5 -90.6 -13.9 8.2 -2.6 -11.8 70 70 A S S S+ 0 0 106 -3,-0.3 2,-0.3 2,-0.1 -1,-0.2 -0.102 104.0 113.4-157.3 42.5 11.6 -1.0 -11.8 71 71 A T - 0 0 44 -3,-0.1 -35,-0.1 -40,-0.1 -34,-0.1 -0.809 64.7-103.9-119.0 160.1 11.7 1.4 -8.9 72 72 A T > - 0 0 64 -2,-0.3 4,-1.8 -41,-0.2 5,-0.1 -0.415 26.7-119.5 -80.1 157.5 13.6 1.5 -5.6 73 73 A M H > S+ 0 0 45 2,-0.2 4,-3.9 1,-0.2 5,-0.2 0.963 108.9 56.5 -59.2 -56.7 12.1 0.5 -2.3 74 74 A G H > S+ 0 0 42 1,-0.2 4,-3.3 2,-0.2 -1,-0.2 0.911 107.4 46.7 -38.6 -70.0 12.7 3.9 -0.7 75 75 A S H > S+ 0 0 70 1,-0.3 4,-2.4 2,-0.2 5,-0.3 0.887 115.9 47.2 -40.4 -52.9 10.8 5.9 -3.4 76 76 A A H X S+ 0 0 2 -4,-1.8 4,-4.2 1,-0.2 -1,-0.3 0.949 111.4 50.6 -55.4 -53.5 8.0 3.3 -3.1 77 77 A V H X S+ 0 0 62 -4,-3.9 4,-2.5 2,-0.2 5,-0.2 0.938 109.3 52.2 -49.0 -55.5 8.1 3.5 0.7 78 78 A K H >X S+ 0 0 151 -4,-3.3 3,-1.4 2,-0.3 4,-0.6 0.949 116.6 36.8 -44.4 -69.4 7.9 7.3 0.6 79 79 A V H >< S+ 0 0 51 -4,-2.4 3,-1.0 1,-0.3 -1,-0.2 0.872 115.1 57.5 -52.2 -40.1 4.8 7.3 -1.7 80 80 A L H 3< S+ 0 0 4 -4,-4.2 -1,-0.3 -5,-0.3 -2,-0.3 0.809 117.3 33.8 -60.8 -30.2 3.6 4.3 0.2 81 81 A T H << S+ 0 0 80 -4,-2.5 2,-0.6 -3,-1.4 -1,-0.3 0.285 108.2 78.1-106.1 5.9 3.9 6.5 3.3 82 82 A S S << S+ 0 0 79 -3,-1.0 2,-0.2 -4,-0.6 -1,-0.2 -0.777 84.3 50.1-119.3 84.5 2.9 9.6 1.4 83 83 A S - 0 0 36 -2,-0.6 3,-0.2 -3,-0.1 -19,-0.0 -0.771 64.5-131.0 160.4 156.4 -0.9 9.5 0.9 84 84 A S S S+ 0 0 75 1,-0.3 -66,-0.3 -2,-0.2 2,-0.2 0.432 104.2 30.8-104.6 -5.0 -4.2 9.0 2.7 85 85 A R S S- 0 0 179 -68,-0.1 2,-0.3 -3,-0.1 -1,-0.3 -0.631 73.1-170.2-157.2 90.1 -5.5 6.5 0.2 86 86 A L E -B 16 0B 0 -70,-2.2 -70,-1.0 -3,-0.2 2,-0.5 -0.602 9.4-154.7 -84.5 143.7 -3.0 4.3 -1.6 87 87 A H E +B 15 0B 65 -2,-0.3 -23,-1.0 -72,-0.2 -22,-0.6 -0.812 18.6 178.5-122.4 88.6 -4.2 2.2 -4.6 88 88 A M E -BE 14 63B 0 -74,-0.8 -74,-0.9 -2,-0.5 2,-0.5 -0.713 10.4-161.4 -93.3 141.1 -1.9 -0.8 -5.0 89 89 A M E - E 0 62B 37 -27,-3.0 -28,-1.8 -2,-0.3 -27,-1.3 -0.979 5.1-168.0-127.3 120.3 -2.6 -3.4 -7.7 90 90 A V E - E 0 60B 2 -2,-0.5 -78,-1.8 -78,-0.4 2,-0.6 -0.662 19.4-126.8-103.0 159.9 -1.1 -6.9 -7.6 91 91 A R E -A 11 0A 151 -32,-0.9 2,-0.4 -2,-0.2 -32,-0.2 -0.934 25.8-172.4-112.5 114.9 -1.0 -9.4 -10.3 92 92 A R E -A 10 0A 131 -82,-1.4 -82,-0.8 -2,-0.6 3,-0.1 -0.835 18.7-177.5-107.7 144.2 -2.4 -12.9 -9.5 93 93 A M - 0 0 151 1,-0.4 2,-0.2 -2,-0.4 -1,-0.1 0.471 52.7-104.8-113.1 -10.2 -2.2 -15.9 -11.8 94 94 A G S S+ 0 0 37 1,-0.2 -1,-0.4 -87,-0.0 -85,-0.0 -0.638 73.0 92.1 115.1-173.5 -4.1 -18.3 -9.5 95 95 A S - 0 0 125 -2,-0.2 -1,-0.2 1,-0.1 -2,-0.1 0.149 64.9-111.1 69.1 167.6 -3.3 -21.1 -7.2 96 96 A G - 0 0 65 2,-0.0 -1,-0.1 0, 0.0 -39,-0.0 -0.801 30.5-167.3-142.6 96.3 -2.6 -20.8 -3.5 97 97 A P - 0 0 122 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.166 11.0-138.3 -75.0 172.9 1.0 -21.4 -2.3 98 98 A S - 0 0 122 2,-0.1 2,-0.2 -2,-0.0 -41,-0.0 -0.923 8.4-122.6-133.7 158.0 2.0 -21.9 1.3 99 99 A S 0 0 119 -2,-0.3 0, 0.0 -42,-0.0 0, 0.0 -0.660 360.0 360.0 -99.8 156.6 4.9 -20.7 3.5 100 100 A G 0 0 131 -2,-0.2 -2,-0.1 0, 0.0 0, 0.0 0.304 360.0 360.0 136.2 360.0 7.3 -22.9 5.5