==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 22-FEB-07 2EFF . COMPND 2 MOLECULE: PROTEIN CYAY; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR F.SICA,M.FRANZESE . 106 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6262.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 67.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 30 28.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 29.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M > 0 0 181 0, 0.0 4,-1.2 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0-116.5 2.7 23.8 46.9 2 2 A N H > + 0 0 89 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.874 360.0 57.7 -71.5 -39.1 5.4 21.9 45.0 3 3 A D H > S+ 0 0 99 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.934 108.8 42.4 -61.9 -50.8 3.3 20.8 41.9 4 4 A S H > S+ 0 0 71 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.918 114.9 50.4 -64.6 -38.8 2.2 24.2 40.7 5 5 A E H X S+ 0 0 89 -4,-1.2 4,-2.9 1,-0.2 5,-0.2 0.911 110.1 51.9 -66.9 -39.4 5.6 25.7 41.3 6 6 A F H X S+ 0 0 0 -4,-2.4 4,-3.0 2,-0.2 5,-0.3 0.930 110.1 48.1 -55.9 -50.7 7.2 22.9 39.4 7 7 A H H X S+ 0 0 78 -4,-2.5 4,-2.2 1,-0.2 -2,-0.2 0.918 113.1 49.5 -60.8 -41.1 4.8 23.4 36.4 8 8 A R H X S+ 0 0 171 -4,-2.6 4,-1.9 2,-0.2 -2,-0.2 0.962 116.3 39.0 -63.1 -52.3 5.5 27.2 36.5 9 9 A L H X S+ 0 0 47 -4,-2.9 4,-1.9 1,-0.2 -2,-0.2 0.906 116.7 49.1 -71.8 -36.3 9.3 26.9 36.6 10 10 A A H X S+ 0 0 0 -4,-3.0 4,-2.7 -5,-0.2 -1,-0.2 0.885 109.0 53.8 -65.8 -39.6 9.6 24.0 34.1 11 11 A D H X S+ 0 0 90 -4,-2.2 4,-2.2 -5,-0.3 -1,-0.2 0.920 110.2 48.2 -62.9 -39.4 7.2 25.8 31.7 12 12 A Q H X S+ 0 0 108 -4,-1.9 4,-2.4 -5,-0.2 -1,-0.2 0.882 110.4 50.2 -64.2 -39.2 9.6 28.8 31.9 13 13 A L H X S+ 0 0 6 -4,-1.9 4,-2.7 2,-0.2 5,-0.2 0.921 108.8 53.4 -63.7 -44.4 12.7 26.6 31.3 14 14 A W H X S+ 0 0 9 -4,-2.7 4,-2.7 1,-0.2 5,-0.2 0.949 111.3 45.6 -59.6 -47.6 11.0 25.0 28.3 15 15 A L H X S+ 0 0 67 -4,-2.2 4,-3.0 1,-0.2 5,-0.3 0.933 110.5 52.9 -62.8 -42.9 10.3 28.4 26.8 16 16 A T H X S+ 0 0 30 -4,-2.4 4,-2.0 1,-0.2 -1,-0.2 0.937 113.2 43.6 -64.1 -39.3 13.8 29.7 27.4 17 17 A I H X S+ 0 0 1 -4,-2.7 4,-2.2 2,-0.2 5,-0.3 0.943 114.5 49.4 -68.3 -46.1 15.4 26.7 25.7 18 18 A E H X S+ 0 0 70 -4,-2.7 4,-1.6 -5,-0.2 5,-0.2 0.930 114.1 45.6 -55.7 -46.4 13.0 26.8 22.8 19 19 A E H X S+ 0 0 100 -4,-3.0 4,-1.3 -5,-0.2 -1,-0.2 0.898 111.4 51.2 -68.4 -41.7 13.5 30.5 22.2 20 20 A R H < S+ 0 0 70 -4,-2.0 -1,-0.2 -5,-0.3 -2,-0.2 0.892 113.5 44.8 -62.1 -41.4 17.3 30.4 22.5 21 21 A L H >< S+ 0 0 15 -4,-2.2 3,-0.8 1,-0.2 -1,-0.2 0.776 110.9 52.2 -78.6 -23.7 17.5 27.5 20.0 22 22 A D H 3< S+ 0 0 117 -4,-1.6 -1,-0.2 -5,-0.3 -2,-0.2 0.804 109.5 51.5 -78.2 -24.5 15.1 29.1 17.5 23 23 A D T 3< S+ 0 0 117 -4,-1.3 2,-0.3 -5,-0.2 -1,-0.2 0.307 82.0 134.3 -92.4 10.6 17.2 32.2 17.7 24 24 A W < + 0 0 47 -3,-0.8 6,-0.1 1,-0.2 -3,-0.1 -0.438 21.2 165.7 -68.8 123.6 20.3 30.1 17.0 25 25 A D + 0 0 145 -2,-0.3 -1,-0.2 4,-0.0 -4,-0.0 0.433 33.3 115.6-114.5 -7.7 22.4 31.9 14.4 26 26 A G S S- 0 0 21 1,-0.1 4,-0.1 76,-0.1 77,-0.0 0.115 79.3 -97.5 -67.2-174.4 25.7 30.1 14.6 27 27 A D S S+ 0 0 145 2,-0.1 -1,-0.1 0, 0.0 2,-0.0 0.889 96.5 84.5 -70.3 -38.8 27.4 28.0 12.0 28 28 A S S S- 0 0 22 1,-0.1 2,-0.7 15,-0.0 71,-0.1 -0.377 81.8-121.6 -69.5 146.2 26.3 24.7 13.3 29 29 A D + 0 0 111 70,-0.1 2,-0.4 -2,-0.0 15,-0.4 -0.797 37.9 177.0 -84.1 114.5 22.9 23.2 12.4 30 30 A I - 0 0 22 -2,-0.7 2,-0.4 -9,-0.1 13,-0.2 -0.988 8.5-165.3-122.9 126.4 21.1 22.7 15.7 31 31 A D E -A 42 0A 43 11,-2.3 11,-2.4 -2,-0.4 2,-0.4 -0.889 5.2-164.7-113.9 147.2 17.5 21.4 15.8 32 32 A C E +A 41 0A 34 -2,-0.4 2,-0.3 9,-0.2 9,-0.2 -0.989 11.4 176.7-126.6 133.1 15.1 21.4 18.7 33 33 A E E -A 40 0A 110 7,-2.0 7,-2.8 -2,-0.4 2,-0.5 -0.986 20.3-145.7-135.7 149.1 11.9 19.3 18.7 34 34 A I E +A 39 0A 83 -2,-0.3 2,-0.4 5,-0.2 5,-0.2 -0.961 22.6 171.9-116.7 122.5 9.2 18.7 21.4 35 35 A N E > S-A 38 0A 99 3,-2.7 3,-1.8 -2,-0.5 -2,-0.0 -0.956 73.0 -15.9-135.8 117.4 7.6 15.3 21.5 36 36 A G T 3 S- 0 0 90 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.836 128.6 -56.0 56.9 34.8 5.2 14.2 24.3 37 37 A G T 3 S+ 0 0 40 1,-0.3 2,-0.4 15,-0.1 -1,-0.3 0.352 113.4 123.3 84.4 -3.0 6.5 17.2 26.2 38 38 A V E < -A 35 0A 42 -3,-1.8 -3,-2.7 14,-0.1 2,-0.5 -0.774 56.2-139.7 -93.1 134.5 10.1 16.0 25.9 39 39 A L E -AB 34 51A 0 12,-2.6 12,-2.4 -2,-0.4 2,-0.5 -0.817 17.1-171.0 -92.9 134.2 12.6 18.4 24.3 40 40 A T E -AB 33 50A 28 -7,-2.8 -7,-2.0 -2,-0.5 2,-0.5 -0.982 5.6-164.1-122.8 118.3 15.2 16.8 22.0 41 41 A I E -AB 32 49A 5 8,-2.9 8,-2.3 -2,-0.5 2,-0.4 -0.885 11.9-162.4 -95.5 128.2 18.1 18.8 20.7 42 42 A T E -AB 31 48A 45 -11,-2.4 -11,-2.3 -2,-0.5 6,-0.2 -0.933 0.8-157.3-120.4 135.7 19.9 17.2 17.7 43 43 A F > - 0 0 7 4,-2.7 3,-2.0 -2,-0.4 -13,-0.1 -0.625 32.2-104.9-109.6 164.8 23.3 18.1 16.5 44 44 A E T 3 S+ 0 0 124 -15,-0.4 55,-0.1 1,-0.3 -1,-0.1 0.746 117.5 60.8 -63.1 -25.9 25.0 17.7 13.1 45 45 A N T 3 S- 0 0 107 53,-0.4 -1,-0.3 2,-0.1 3,-0.1 0.401 120.9-106.5 -84.5 7.7 27.1 14.8 14.3 46 46 A G S < S+ 0 0 50 -3,-2.0 -2,-0.1 1,-0.3 -1,-0.1 0.253 79.7 130.8 89.8 -7.9 23.9 12.9 15.0 47 47 A S - 0 0 14 51,-0.2 -4,-2.7 -5,-0.1 -1,-0.3 -0.253 39.5-157.7 -75.2 164.7 24.3 13.3 18.8 48 48 A K E -B 42 0A 108 -6,-0.2 2,-0.4 -3,-0.1 -6,-0.2 -0.926 18.9-147.7-140.3 162.0 21.4 14.5 20.9 49 49 A I E -B 41 0A 0 -8,-2.3 -8,-2.9 -2,-0.3 2,-0.4 -0.996 20.5-161.3-127.9 128.1 20.5 16.2 24.2 50 50 A I E -BC 40 63A 63 13,-3.2 13,-2.8 -2,-0.4 2,-0.4 -0.958 7.0-173.0-118.0 136.0 17.2 15.2 25.8 51 51 A I E +BC 39 62A 0 -12,-2.4 -12,-2.6 -2,-0.4 2,-0.3 -0.996 15.3 162.5-127.3 125.2 15.4 17.2 28.5 52 52 A N E - C 0 61A 51 9,-2.3 9,-3.3 -2,-0.4 2,-0.4 -0.943 35.8-108.9-143.4 166.4 12.3 16.0 30.3 53 53 A R E - C 0 60A 65 -2,-0.3 2,-0.6 7,-0.2 7,-0.2 -0.789 12.5-161.4 -92.7 136.2 10.1 16.5 33.3 54 54 A Q E > > - C 0 59A 56 5,-3.1 5,-2.0 -2,-0.4 3,-0.6 -0.883 16.3-175.6-113.7 85.2 10.1 14.0 36.2 55 55 A E G > 5S+ 0 0 72 -2,-0.6 3,-1.5 1,-0.2 -1,-0.2 0.839 73.4 56.9 -57.6 -49.1 6.8 15.1 37.8 56 56 A P G 3 5S+ 0 0 99 0, 0.0 -1,-0.2 0, 0.0 -53,-0.0 0.877 117.9 35.6 -47.3 -44.3 6.7 12.9 40.9 57 57 A L G < 5S- 0 0 90 -3,-0.6 -2,-0.2 2,-0.1 3,-0.1 0.422 104.4-124.6 -90.4 -3.5 10.1 14.3 42.0 58 58 A H T < 5 + 0 0 36 -3,-1.5 15,-0.7 -4,-0.5 2,-0.3 0.900 68.0 135.8 54.9 44.0 9.6 17.9 40.8 59 59 A Q E < -CD 54 72A 13 -5,-2.0 -5,-3.1 13,-0.1 2,-0.5 -0.877 53.7-143.0-122.2 154.4 12.8 17.4 38.8 60 60 A V E -CD 53 71A 0 11,-2.0 11,-2.9 -2,-0.3 2,-0.4 -0.970 25.0-151.7-109.1 134.1 14.0 18.2 35.3 61 61 A W E -CD 52 70A 67 -9,-3.3 -9,-2.3 -2,-0.5 2,-0.4 -0.888 6.5-158.1-110.2 146.7 16.3 15.6 33.8 62 62 A L E -CD 51 69A 2 7,-3.1 7,-2.8 -2,-0.4 2,-0.5 -0.950 4.9-171.5-119.0 130.2 19.1 16.0 31.3 63 63 A A E +CD 50 68A 41 -13,-2.8 -13,-3.2 -2,-0.4 2,-0.2 -0.997 15.1 169.4-120.4 126.7 20.5 13.3 29.1 64 64 A T - 0 0 18 3,-2.6 -15,-0.1 -2,-0.5 27,-0.0 -0.680 52.4 -97.4-124.7 173.7 23.6 14.1 27.0 65 65 A K S S+ 0 0 164 -2,-0.2 -16,-0.1 -17,-0.2 3,-0.1 0.848 125.6 43.9 -61.2 -31.2 25.9 12.0 25.0 66 66 A Q S S- 0 0 109 1,-0.1 2,-0.3 28,-0.0 -1,-0.2 0.803 123.6 -38.9 -87.9 -33.7 28.2 12.0 28.0 67 67 A G - 0 0 30 2,-0.0 -3,-2.6 0, 0.0 2,-0.4 -0.888 54.7 -87.0-168.7-165.1 25.8 11.4 31.0 68 68 A G E -D 63 0A 38 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.990 33.9-170.1-129.9 136.7 22.5 11.9 32.8 69 69 A Y E -D 62 0A 42 -7,-2.8 -7,-3.1 -2,-0.4 2,-0.5 -0.999 7.3-156.1-134.9 128.4 21.9 14.9 35.2 70 70 A H E -D 61 0A 40 -2,-0.4 11,-3.4 -9,-0.2 2,-0.5 -0.952 13.7-153.7-116.6 128.7 18.9 15.3 37.5 71 71 A F E -DE 60 80A 0 -11,-2.9 -11,-2.0 -2,-0.5 2,-0.3 -0.901 7.3-155.5-117.7 128.8 17.9 18.8 38.6 72 72 A D E -DE 59 79A 38 7,-2.5 7,-2.2 -2,-0.5 2,-0.4 -0.650 30.6-112.0 -86.2 141.7 16.1 20.2 41.7 73 73 A L E + E 0 78A 42 -15,-0.7 2,-0.2 -2,-0.3 5,-0.2 -0.633 44.2 168.8 -69.0 129.3 14.2 23.4 41.7 74 74 A K E > - E 0 77A 111 3,-2.9 3,-0.6 -2,-0.4 2,-0.1 -0.744 56.0 -64.5-142.7 96.9 16.2 25.7 44.0 75 75 A G T 3 S- 0 0 69 -2,-0.2 -1,-0.2 1,-0.2 2,-0.0 -0.362 117.9 -11.3 64.6-131.9 15.2 29.4 44.0 76 76 A D T 3 S+ 0 0 151 -2,-0.1 2,-0.3 -3,-0.1 -1,-0.2 -0.099 129.2 64.8 -96.8 44.4 15.9 30.9 40.6 77 77 A E E < S-E 74 0A 92 -3,-0.6 -3,-2.9 2,-0.0 2,-0.5 -0.993 72.4-126.3-154.0 165.9 17.9 27.9 39.5 78 78 A W E -E 73 0A 18 -2,-0.3 9,-2.5 -5,-0.2 2,-0.5 -0.991 33.7-158.8-109.9 123.7 17.9 24.3 38.6 79 79 A I E -EF 72 86A 32 -7,-2.2 -7,-2.5 -2,-0.5 2,-0.2 -0.936 20.1-119.9-116.6 123.4 20.6 22.5 40.6 80 80 A C E > -E 71 0A 4 5,-3.1 4,-2.9 -2,-0.5 -9,-0.2 -0.415 22.9-141.9 -61.3 118.5 22.2 19.1 39.7 81 81 A D T 4 S+ 0 0 68 -11,-3.4 -1,-0.2 -2,-0.2 -10,-0.1 0.645 94.8 39.4 -72.1 -10.4 21.3 16.9 42.6 82 82 A R T 4 S+ 0 0 191 -12,-0.3 -1,-0.2 3,-0.1 -11,-0.0 0.881 131.0 20.0 -93.5 -47.3 24.7 15.1 42.5 83 83 A S T 4 S- 0 0 60 2,-0.1 -2,-0.2 3,-0.0 3,-0.1 0.619 89.1-126.1-100.7 -16.2 27.2 17.9 41.8 84 84 A G < + 0 0 45 -4,-2.9 -3,-0.1 1,-0.3 2,-0.1 0.458 62.1 141.5 82.4 -2.7 25.4 21.1 42.7 85 85 A E - 0 0 98 -5,-0.2 -5,-3.1 -6,-0.1 -1,-0.3 -0.438 54.4-104.2 -76.6 156.3 26.1 22.5 39.2 86 86 A T B > -F 79 0A 26 -7,-0.2 4,-2.4 1,-0.1 5,-0.2 -0.393 17.6-123.2 -82.1 153.0 23.4 24.6 37.4 87 87 A F H > S+ 0 0 1 -9,-2.5 4,-2.8 1,-0.2 5,-0.3 0.930 110.6 49.3 -56.0 -47.6 21.2 23.4 34.6 88 88 A W H > S+ 0 0 44 -10,-0.2 4,-2.4 1,-0.2 5,-0.3 0.897 109.7 51.4 -67.3 -34.2 22.3 26.1 32.2 89 89 A D H > S+ 0 0 82 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.962 115.1 41.3 -65.9 -43.1 26.0 25.6 32.8 90 90 A L H X S+ 0 0 12 -4,-2.4 4,-2.1 2,-0.2 5,-0.2 0.895 114.8 50.8 -72.3 -34.1 25.7 21.8 32.2 91 91 A L H X S+ 0 0 7 -4,-2.8 4,-2.8 -5,-0.2 5,-0.2 0.919 112.6 47.5 -68.2 -40.7 23.4 22.2 29.2 92 92 A E H X S+ 0 0 28 -4,-2.4 4,-2.5 -5,-0.3 11,-0.3 0.900 110.8 51.7 -64.3 -40.1 25.8 24.8 27.7 93 93 A Q H X S+ 0 0 83 -4,-2.2 4,-2.2 -5,-0.3 -1,-0.2 0.954 115.2 40.5 -66.7 -43.3 28.8 22.6 28.3 94 94 A A H X S+ 0 0 3 -4,-2.1 4,-3.3 2,-0.2 5,-0.2 0.928 115.7 49.9 -68.5 -43.6 27.2 19.6 26.6 95 95 A A H X S+ 0 0 4 -4,-2.8 4,-2.0 2,-0.2 6,-0.3 0.882 112.3 49.5 -63.0 -35.1 25.7 21.6 23.8 96 96 A T H X>S+ 0 0 45 -4,-2.5 4,-1.5 -5,-0.2 5,-0.9 0.908 113.9 45.1 -69.2 -43.0 29.1 23.2 23.2 97 97 A Q H <5S+ 0 0 114 -4,-2.2 -2,-0.2 -5,-0.3 -1,-0.2 0.931 116.4 44.3 -67.5 -41.5 30.8 19.9 23.2 98 98 A Q H <5S+ 0 0 13 -4,-3.3 -53,-0.4 1,-0.2 -51,-0.2 0.818 118.2 42.9 -76.9 -26.6 28.3 18.1 21.0 99 99 A A H <5S- 0 0 19 -4,-2.0 -1,-0.2 2,-0.3 -2,-0.2 0.670 98.2-134.8 -86.1 -19.5 28.0 21.0 18.5 100 100 A G T <5S+ 0 0 72 -4,-1.5 2,-0.3 1,-0.2 -3,-0.2 0.799 78.5 90.8 64.0 27.9 31.7 21.6 18.4 101 101 A E S