==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 26-FEB-07 2EFV . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN MJ0366; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII DSM . AUTHOR T.S.KUMAREVEL,P.KARTHE,S.KURAMITSU,S.YOKOYAMA,RIKEN . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5516.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 65.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 8.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 40.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 6 A F 0 0 189 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -8.5 4.6 32.0 2.9 2 7 A M + 0 0 55 58,-0.0 55,-0.1 1,-0.0 0, 0.0 0.171 360.0 60.4 78.3 160.9 3.0 33.3 -0.4 3 8 A K + 0 0 120 1,-0.1 54,-0.1 54,-0.1 53,-0.1 0.949 64.0 152.1 46.8 54.4 4.8 34.6 -3.6 4 9 A E - 0 0 47 52,-0.1 -1,-0.1 2,-0.1 52,-0.1 0.518 50.1-134.0 -92.2 -9.2 6.4 31.2 -3.8 5 10 A K + 0 0 150 50,-0.3 2,-0.3 1,-0.2 51,-0.1 0.924 53.5 148.5 53.7 47.8 6.9 31.1 -7.6 6 11 A K - 0 0 115 49,-0.2 49,-2.6 50,-0.1 2,-0.3 -0.787 45.1-116.8-113.2 158.0 5.6 27.5 -7.8 7 12 A R E -A 54 0A 160 -2,-0.3 2,-0.5 47,-0.3 47,-0.2 -0.703 11.2-148.8 -96.1 145.3 3.7 25.7 -10.5 8 13 A A E -A 53 0A 13 45,-2.5 45,-1.7 -2,-0.3 2,-0.5 -0.943 19.6-151.7-107.7 128.9 0.2 24.3 -10.2 9 14 A T E -A 52 0A 53 -2,-0.5 2,-0.3 43,-0.2 43,-0.2 -0.905 15.7-178.0-109.2 131.8 -0.1 21.2 -12.4 10 15 A F E -A 51 0A 11 41,-3.0 41,-2.8 -2,-0.5 2,-0.5 -0.841 23.0-140.2-125.6 161.8 -3.5 20.2 -13.9 11 16 A Y E +A 50 0A 116 -2,-0.3 2,-0.3 39,-0.2 39,-0.2 -0.976 29.5 179.2-125.0 113.0 -4.8 17.3 -16.0 12 17 A L E -A 49 0A 0 37,-2.7 37,-2.6 -2,-0.5 36,-0.3 -0.753 39.7-125.3-115.1 160.3 -7.3 18.4 -18.7 13 18 A Y S S+ 0 0 53 34,-0.3 2,-0.3 -2,-0.3 33,-0.2 0.411 101.2 47.6 -83.5 2.0 -9.3 16.6 -21.4 14 19 A K S S- 0 0 60 35,-0.2 2,-1.8 2,-0.0 -2,-0.1 -0.993 87.9-122.2-140.8 140.0 -7.9 19.0 -24.0 15 20 A N + 0 0 88 -2,-0.3 35,-0.1 -4,-0.1 -2,-0.0 -0.263 48.8 172.5 -81.6 54.2 -4.2 20.0 -24.4 16 21 A I - 0 0 12 -2,-1.8 2,-0.1 1,-0.1 -4,-0.1 -0.077 30.7-111.0 -59.5 158.0 -4.9 23.7 -23.9 17 22 A D >> - 0 0 50 1,-0.1 4,-2.3 34,-0.1 3,-0.5 -0.424 30.8-101.1 -88.5 168.8 -2.1 26.3 -23.6 18 23 A G H 3> S+ 0 0 30 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.796 119.1 62.9 -57.8 -31.8 -1.2 28.3 -20.5 19 24 A R H 3> S+ 0 0 196 2,-0.2 4,-1.5 1,-0.2 -1,-0.2 0.921 110.7 37.0 -58.2 -50.0 -3.0 31.3 -21.8 20 25 A K H <> S+ 0 0 68 -3,-0.5 4,-2.4 2,-0.2 -2,-0.2 0.858 114.1 56.5 -72.4 -38.0 -6.4 29.5 -21.8 21 26 A L H X S+ 0 0 0 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.944 109.1 46.4 -58.8 -48.8 -5.6 27.6 -18.6 22 27 A R H X S+ 0 0 84 -4,-2.9 4,-2.2 1,-0.2 -1,-0.2 0.884 109.9 55.3 -61.5 -39.5 -4.9 30.9 -16.8 23 28 A Y H X S+ 0 0 114 -4,-1.5 4,-1.7 -5,-0.2 -1,-0.2 0.929 108.9 47.0 -57.1 -49.0 -8.2 32.3 -18.3 24 29 A L H X S+ 0 0 0 -4,-2.4 4,-1.3 2,-0.2 -2,-0.2 0.891 108.9 54.1 -61.4 -43.9 -10.2 29.3 -16.9 25 30 A L H >< S+ 0 0 0 -4,-2.2 3,-0.7 1,-0.2 4,-0.2 0.941 110.5 46.2 -58.3 -47.9 -8.6 29.6 -13.4 26 31 A H H >< S+ 0 0 75 -4,-2.2 3,-1.6 1,-0.2 4,-0.2 0.829 104.4 62.0 -65.9 -30.5 -9.6 33.3 -13.2 27 32 A K H >< S+ 0 0 89 -4,-1.7 3,-1.8 1,-0.3 -1,-0.2 0.825 91.1 68.9 -63.0 -30.6 -13.1 32.5 -14.4 28 33 A L G X< S+ 0 0 2 -4,-1.3 3,-1.3 -3,-0.7 -1,-0.3 0.636 78.1 80.0 -64.2 -13.5 -13.6 30.3 -11.3 29 34 A E G < S+ 0 0 90 -3,-1.6 -1,-0.3 1,-0.3 -2,-0.2 0.795 100.3 39.5 -63.9 -25.4 -13.5 33.5 -9.2 30 35 A N G < S+ 0 0 141 -3,-1.8 2,-0.5 -4,-0.2 -1,-0.3 0.197 89.8 109.7-109.5 14.9 -17.2 34.0 -10.2 31 36 A V < + 0 0 28 -3,-1.3 3,-0.1 1,-0.1 -3,-0.0 -0.814 31.9 170.1 -96.1 127.3 -18.3 30.4 -10.0 32 37 A E - 0 0 168 -2,-0.5 2,-0.3 1,-0.3 -1,-0.1 0.646 67.6 -5.5-105.2 -24.5 -20.7 29.6 -7.2 33 38 A N - 0 0 123 2,-0.0 2,-0.4 0, 0.0 -1,-0.3 -0.967 61.9-120.5-160.7 170.6 -21.7 26.1 -8.3 34 39 A V - 0 0 37 -2,-0.3 39,-0.0 -3,-0.1 -3,-0.0 -0.990 30.1-121.2-125.5 127.6 -21.5 23.5 -11.0 35 40 A D > - 0 0 81 -2,-0.4 4,-2.4 1,-0.1 5,-0.2 -0.327 24.5-119.1 -64.5 146.0 -24.5 22.1 -12.9 36 41 A I H > S+ 0 0 131 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.857 111.9 51.3 -55.5 -40.5 -24.9 18.4 -12.7 37 42 A D H > S+ 0 0 66 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.945 110.9 47.7 -64.1 -47.7 -24.6 17.8 -16.4 38 43 A T H > S+ 0 0 20 1,-0.2 4,-2.4 2,-0.2 -2,-0.2 0.890 111.5 51.6 -59.4 -41.5 -21.4 19.8 -16.7 39 44 A L H X S+ 0 0 54 -4,-2.4 4,-2.6 2,-0.2 5,-0.2 0.927 109.1 49.5 -63.5 -45.3 -20.0 17.9 -13.7 40 45 A R H X S+ 0 0 100 -4,-2.4 4,-2.8 1,-0.2 5,-0.2 0.946 112.0 48.6 -59.5 -47.1 -20.8 14.5 -15.2 41 46 A R H X S+ 0 0 127 -4,-2.4 4,-1.6 1,-0.2 -1,-0.2 0.911 112.7 47.4 -59.7 -43.8 -19.1 15.5 -18.5 42 47 A A H < S+ 0 0 0 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.890 114.4 47.3 -65.9 -38.4 -16.0 16.8 -16.8 43 48 A I H < S+ 0 0 94 -4,-2.6 -2,-0.2 1,-0.2 -1,-0.2 0.908 114.5 45.4 -69.3 -41.5 -15.8 13.6 -14.6 44 49 A E H < S+ 0 0 136 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.714 91.9 100.3 -76.2 -20.2 -16.3 11.3 -17.6 45 50 A A S < S- 0 0 26 -4,-1.6 2,-1.0 -5,-0.2 30,-0.0 -0.359 84.7-111.4 -67.6 144.6 -13.9 13.1 -19.9 46 51 A E - 0 0 137 -33,-0.2 2,-1.5 1,-0.1 3,-0.2 -0.687 28.9-161.5 -80.7 104.8 -10.4 11.6 -20.2 47 52 A K + 0 0 61 -2,-1.0 -34,-0.3 1,-0.2 -1,-0.1 -0.606 39.7 136.2 -90.1 77.7 -8.2 14.1 -18.5 48 53 A K + 0 0 122 -2,-1.5 2,-0.7 -36,-0.3 -1,-0.2 0.432 36.0 96.5-104.6 -3.4 -4.8 13.0 -19.9 49 54 A Y E -A 12 0A 86 -37,-2.6 -37,-2.7 -3,-0.2 2,-0.7 -0.818 62.3-148.7 -95.8 116.1 -3.2 16.4 -20.8 50 55 A K E +A 11 0A 113 -2,-0.7 2,-0.4 -39,-0.2 -39,-0.2 -0.725 23.9 173.7 -83.3 115.3 -0.8 17.6 -18.2 51 56 A R E -A 10 0A 73 -41,-2.8 -41,-3.0 -2,-0.7 2,-0.3 -0.988 4.9-176.6-126.4 131.4 -0.8 21.5 -18.2 52 57 A S E -A 9 0A 32 -2,-0.4 2,-0.3 -43,-0.2 -43,-0.2 -0.911 9.6-174.0-128.9 155.0 1.0 23.7 -15.7 53 58 A I E -A 8 0A 8 -45,-1.7 -45,-2.5 -2,-0.3 2,-0.5 -0.992 29.5-120.3-143.8 145.0 1.4 27.3 -14.9 54 59 A T E -A 7 0A 74 -2,-0.3 -47,-0.3 -47,-0.2 2,-0.2 -0.768 42.9-124.1 -84.8 129.0 3.6 29.2 -12.4 55 60 A L - 0 0 22 -49,-2.6 -50,-0.3 -2,-0.5 -49,-0.2 -0.501 11.4-143.9 -84.6 143.1 1.3 31.1 -10.1 56 61 A T > - 0 0 61 -2,-0.2 4,-2.1 -51,-0.1 3,-0.1 -0.451 42.1 -97.7 -86.2 170.2 1.2 34.8 -9.4 57 62 A E H > S+ 0 0 90 1,-0.2 4,-1.4 2,-0.2 -1,-0.1 0.878 126.4 53.0 -58.8 -39.2 0.3 35.8 -5.8 58 63 A E H > S+ 0 0 119 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.882 110.3 47.0 -64.9 -38.2 -3.3 36.3 -6.8 59 64 A E H > S+ 0 0 2 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.823 103.0 63.6 -73.9 -31.5 -3.6 32.9 -8.4 60 65 A E H X S+ 0 0 14 -4,-2.1 4,-2.3 1,-0.2 -1,-0.2 0.923 103.6 47.7 -58.7 -44.5 -2.0 31.2 -5.4 61 66 A V H X S+ 0 0 72 -4,-1.4 4,-2.1 2,-0.2 -1,-0.2 0.824 109.2 53.2 -69.0 -29.2 -4.9 32.2 -3.2 62 67 A I H X S+ 0 0 2 -4,-1.0 4,-2.4 2,-0.2 -1,-0.2 0.929 111.0 47.2 -67.5 -44.7 -7.4 31.0 -5.8 63 68 A I H X S+ 0 0 35 -4,-2.4 4,-2.2 1,-0.2 -2,-0.2 0.892 112.7 49.1 -61.9 -41.7 -5.7 27.6 -5.8 64 69 A Q H < S+ 0 0 112 -4,-2.3 -1,-0.2 2,-0.2 -2,-0.2 0.873 110.7 50.6 -66.4 -37.9 -5.6 27.6 -2.0 65 70 A R H < S+ 0 0 136 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.916 115.7 41.6 -65.6 -43.7 -9.3 28.5 -1.8 66 71 A L H >< S+ 0 0 18 -4,-2.4 3,-1.9 1,-0.2 -2,-0.2 0.804 85.0 172.7 -75.5 -30.2 -10.3 25.7 -4.3 67 72 A G G >< - 0 0 40 -4,-2.2 3,-1.7 1,-0.3 4,-0.2 -0.263 68.7 -7.2 57.0-139.2 -7.9 23.1 -2.8 68 73 A K G 3 S+ 0 0 220 1,-0.3 4,-0.4 2,-0.1 -1,-0.3 0.511 127.5 70.2 -67.9 -5.5 -8.4 19.6 -4.3 69 74 A S G <> S+ 0 0 54 -3,-1.9 4,-2.6 1,-0.2 -1,-0.3 0.569 74.6 90.5 -87.3 -7.8 -11.5 20.7 -6.3 70 75 A A H <> S+ 0 0 6 -3,-1.7 4,-2.4 1,-0.2 5,-0.2 0.903 82.8 48.7 -55.3 -50.9 -9.3 22.8 -8.6 71 76 A N H > S+ 0 0 41 -3,-0.2 4,-1.9 -4,-0.2 -1,-0.2 0.934 115.4 43.1 -58.6 -49.1 -8.6 20.2 -11.3 72 77 A L H > S+ 0 0 55 -4,-0.4 4,-2.2 1,-0.2 -1,-0.2 0.929 114.4 50.9 -63.9 -43.7 -12.2 19.1 -11.7 73 78 A L H X S+ 0 0 35 -4,-2.6 4,-2.2 1,-0.2 -1,-0.2 0.858 107.8 52.9 -62.7 -35.1 -13.5 22.7 -11.6 74 79 A L H X S+ 0 0 0 -4,-2.4 4,-2.0 -5,-0.2 -1,-0.2 0.913 110.0 48.3 -65.8 -41.0 -11.0 23.7 -14.3 75 80 A N H X S+ 0 0 0 -4,-1.9 4,-1.9 1,-0.2 -2,-0.2 0.859 108.7 54.5 -66.5 -34.2 -12.2 20.8 -16.4 76 81 A C H X S+ 0 0 0 -4,-2.2 4,-2.0 2,-0.2 -2,-0.2 0.909 108.3 48.5 -65.0 -40.6 -15.8 22.0 -15.7 77 82 A E H X S+ 0 0 9 -4,-2.2 4,-3.1 1,-0.2 -2,-0.2 0.876 108.3 54.6 -65.3 -37.0 -14.9 25.5 -17.0 78 83 A L H X S+ 0 0 0 -4,-2.0 4,-2.6 2,-0.2 -1,-0.2 0.885 107.8 49.5 -63.8 -38.9 -13.4 23.9 -20.1 79 84 A V H < S+ 0 0 24 -4,-1.9 -1,-0.2 2,-0.2 -2,-0.2 0.902 113.7 46.1 -65.2 -41.6 -16.6 22.1 -20.7 80 85 A K H < S+ 0 0 98 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.891 111.3 52.1 -68.2 -40.1 -18.5 25.4 -20.3 81 86 A L H < 0 0 72 -4,-3.1 -2,-0.2 1,-0.2 -1,-0.2 0.967 360.0 360.0 -59.9 -54.5 -16.1 27.2 -22.5 82 87 A D < 0 0 101 -4,-2.6 -1,-0.2 -5,-0.1 -4,-0.0 -0.373 360.0 360.0 -59.8 360.0 -16.4 24.7 -25.3