==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 27-FEB-07 2EG1 . COMPND 2 MOLECULE: NITROGEN REGULATORY PROTEIN P-II; . SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; . AUTHOR H.SAKAI,A.SHINKAI,Y.KITAMURA,S.KURAMITSU,S.YOKOYAMA,RIKEN ST . 95 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6572.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 65.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 26.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 22.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 34 0, 0.0 79,-1.7 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 152.5 -1.1 10.8 13.0 2 2 A K E -AB 49 79A 67 47,-2.4 47,-2.2 77,-0.2 2,-0.4 -0.989 360.0-131.6-135.8 146.7 1.8 12.8 11.5 3 3 A K E -AB 48 78A 52 75,-3.4 75,-2.7 -2,-0.4 2,-0.5 -0.778 20.1-157.7 -92.2 135.9 5.0 14.4 12.9 4 4 A I E -AB 47 77A 0 43,-3.0 43,-1.8 -2,-0.4 2,-0.6 -0.983 8.0-171.6-117.1 118.5 5.4 18.0 11.8 5 5 A E E -AB 46 76A 29 71,-2.4 71,-2.8 -2,-0.5 2,-0.4 -0.953 6.7-177.8-114.3 113.3 9.0 19.2 12.0 6 6 A A E -AB 45 75A 0 39,-2.9 39,-2.8 -2,-0.6 2,-0.6 -0.933 14.8-160.1-116.4 134.6 9.4 23.0 11.4 7 7 A I E +AB 44 74A 34 67,-2.7 67,-0.6 -2,-0.4 2,-0.2 -0.968 27.8 167.7-112.9 117.3 12.7 24.8 11.3 8 8 A I E -A 43 0A 3 35,-3.1 35,-2.6 -2,-0.6 65,-0.1 -0.779 42.0 -82.7-128.7 169.8 12.2 28.5 11.9 9 9 A K > - 0 0 29 63,-0.4 3,-1.8 56,-0.3 4,-0.3 -0.485 44.5-120.7 -70.3 139.1 14.1 31.7 12.7 10 10 A P G > S+ 0 0 54 0, 0.0 3,-1.8 0, 0.0 4,-0.3 0.856 108.5 57.3 -48.5 -45.5 14.9 32.0 16.4 11 11 A F G 3 S+ 0 0 134 1,-0.3 4,-0.4 2,-0.1 3,-0.2 0.644 99.7 61.5 -68.1 -11.9 13.1 35.3 17.0 12 12 A K G <> S+ 0 0 25 -3,-1.8 4,-2.7 1,-0.2 5,-0.3 0.524 77.4 93.9 -88.8 -5.9 9.8 33.8 15.7 13 13 A L H <> S+ 0 0 43 -3,-1.8 4,-2.9 -4,-0.3 5,-0.3 0.907 83.8 46.6 -55.1 -50.2 9.7 31.1 18.4 14 14 A D H > S+ 0 0 105 -4,-0.3 4,-2.5 -3,-0.2 -1,-0.2 0.942 115.4 47.1 -59.1 -47.5 7.4 32.9 20.9 15 15 A E H > S+ 0 0 92 -4,-0.4 4,-2.1 1,-0.2 -2,-0.2 0.913 115.8 43.8 -60.3 -46.3 5.0 33.9 18.2 16 16 A V H X S+ 0 0 0 -4,-2.7 4,-2.3 2,-0.2 -1,-0.2 0.902 112.9 51.7 -67.7 -41.3 4.8 30.5 16.7 17 17 A K H X S+ 0 0 84 -4,-2.9 4,-2.2 -5,-0.3 -2,-0.2 0.933 112.2 46.7 -59.5 -47.2 4.5 28.8 20.1 18 18 A D H X S+ 0 0 91 -4,-2.5 4,-2.4 -5,-0.3 -1,-0.2 0.900 111.4 51.1 -62.8 -41.8 1.6 31.1 21.0 19 19 A A H X S+ 0 0 8 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.897 110.4 48.9 -62.6 -41.3 -0.1 30.5 17.7 20 20 A L H <>S+ 0 0 0 -4,-2.3 5,-2.6 2,-0.2 -1,-0.2 0.911 110.8 49.4 -67.1 -40.8 0.1 26.7 18.0 21 21 A V H ><5S+ 0 0 87 -4,-2.2 3,-1.6 1,-0.2 -1,-0.2 0.914 108.3 56.7 -62.8 -40.2 -1.2 26.9 21.6 22 22 A E H 3<5S+ 0 0 166 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.859 106.1 48.1 -57.8 -41.8 -4.0 29.1 20.2 23 23 A I T 3<5S- 0 0 52 -4,-1.8 -1,-0.3 -5,-0.1 -2,-0.2 0.318 129.2 -94.6 -85.2 10.7 -5.1 26.4 17.7 24 24 A G T < 5 + 0 0 61 -3,-1.6 2,-0.3 1,-0.2 -3,-0.2 0.585 63.2 161.4 95.5 9.2 -5.1 23.8 20.3 25 25 A I < - 0 0 24 -5,-2.6 -1,-0.2 1,-0.1 3,-0.1 -0.510 21.9-162.5 -66.7 123.4 -1.6 22.1 20.2 26 26 A G + 0 0 79 -2,-0.3 2,-0.3 1,-0.2 -1,-0.1 0.771 63.3 4.6 -80.7 -29.2 -1.2 20.3 23.5 27 27 A G - 0 0 49 21,-0.1 2,-0.3 69,-0.0 21,-0.3 -0.995 57.5-175.2-155.1 154.4 2.6 19.7 23.4 28 28 A M - 0 0 49 -2,-0.3 2,-0.5 19,-0.1 19,-0.2 -0.994 17.8-139.8-151.7 153.3 5.7 20.5 21.5 29 29 A T E -C 46 0A 85 17,-2.3 17,-2.3 -2,-0.3 2,-0.4 -0.966 20.6-165.1-117.9 127.9 9.4 19.8 21.5 30 30 A V E -C 45 0A 66 -2,-0.5 2,-0.4 15,-0.2 15,-0.2 -0.924 6.2-176.5-119.0 135.7 11.9 22.5 20.7 31 31 A T E -C 44 0A 60 13,-2.2 13,-2.9 -2,-0.4 2,-0.5 -0.985 27.0-126.7-132.8 140.1 15.6 22.2 19.8 32 32 A E E +C 43 0A 177 -2,-0.4 2,-0.2 11,-0.2 11,-0.2 -0.758 47.2 157.3 -82.8 127.4 18.3 24.8 19.1 33 33 A V E -C 42 0A 39 9,-2.2 9,-2.5 -2,-0.5 2,-0.3 -0.728 33.6-127.9-138.4-176.1 19.8 23.9 15.7 34 34 A K E +C 41 0A 144 7,-0.3 2,-0.3 -2,-0.2 5,-0.1 -0.966 34.3 144.8-136.8 154.6 21.7 25.6 12.9 35 35 A G E C 40 0A 14 5,-2.5 5,-2.8 -2,-0.3 -2,-0.0 -0.938 360.0 360.0-166.9-170.0 21.1 25.8 9.2 36 36 A F 0 0 197 -2,-0.3 -1,-0.1 3,-0.2 35,-0.1 0.170 360.0 360.0-168.9 360.0 21.2 27.5 5.8 37 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 38 54 A D 0 0 187 0, 0.0 2,-0.6 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 129.6 27.6 29.7 7.0 39 55 A F - 0 0 129 -5,-0.1 -3,-0.2 -3,-0.1 -5,-0.0 -0.846 360.0-165.4 -96.6 120.7 25.4 28.1 9.7 40 56 A L E - C 0 35A 100 -5,-2.8 -5,-2.5 -2,-0.6 2,-0.1 -0.776 29.9 -98.8-103.9 148.6 22.9 30.4 11.2 41 57 A P E + C 0 34A 85 0, 0.0 -7,-0.3 0, 0.0 2,-0.3 -0.444 49.8 167.2 -67.3 137.2 21.0 29.6 14.5 42 58 A K E - C 0 33A 17 -9,-2.5 -9,-2.2 -33,-0.2 2,-0.4 -0.839 28.9-126.0-137.7 174.4 17.5 28.3 13.9 43 59 A V E -AC 8 32A 11 -35,-2.6 -35,-3.1 -2,-0.3 2,-0.4 -0.998 13.5-147.7-131.2 133.6 14.9 26.6 16.1 44 60 A K E -AC 7 31A 48 -13,-2.9 -13,-2.2 -2,-0.4 2,-0.4 -0.845 11.7-168.7 -99.1 134.6 13.2 23.3 15.4 45 61 A I E -AC 6 30A 2 -39,-2.8 -39,-2.9 -2,-0.4 2,-0.4 -0.987 3.6-170.8-121.6 131.5 9.7 22.7 16.6 46 62 A E E +AC 5 29A 44 -17,-2.3 -17,-2.3 -2,-0.4 2,-0.3 -0.987 10.8 165.2-124.3 133.5 8.1 19.3 16.5 47 63 A V E -A 4 0A 5 -43,-1.8 -43,-3.0 -2,-0.4 2,-0.5 -0.959 23.4-147.8-137.8 153.7 4.5 18.4 17.2 48 64 A V E +A 3 0A 47 -2,-0.3 2,-0.3 -21,-0.3 -45,-0.2 -0.997 30.3 166.2-124.5 125.5 2.6 15.2 16.4 49 65 A V E -A 2 0A 5 -47,-2.2 -47,-2.4 -2,-0.5 5,-0.1 -0.854 40.5 -79.8-136.3 169.1 -1.0 15.6 15.6 50 66 A R >> - 0 0 77 -2,-0.3 3,-2.1 -49,-0.2 4,-0.6 -0.347 46.8-111.9 -66.2 151.1 -4.1 13.8 14.1 51 67 A D G >4 S+ 0 0 83 1,-0.3 3,-1.3 2,-0.2 4,-0.4 0.884 116.4 56.6 -52.1 -43.4 -4.2 13.6 10.3 52 68 A E G 34 S+ 0 0 148 1,-0.2 -1,-0.3 2,-0.1 4,-0.2 0.579 106.4 51.3 -67.7 -10.1 -7.1 16.0 10.1 53 69 A D G <> S+ 0 0 67 -3,-2.1 4,-1.7 2,-0.1 -1,-0.2 0.477 82.5 91.2-105.0 -3.5 -5.2 18.6 12.0 54 70 A V H S+ 0 0 120 -4,-0.4 4,-3.0 1,-0.2 5,-0.2 0.894 109.3 51.7 -56.9 -44.3 -3.1 21.4 7.4 56 72 A K H > S+ 0 0 111 -4,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.893 113.0 47.1 -61.4 -38.4 -4.3 23.8 10.1 57 73 A V H X S+ 0 0 4 -4,-1.7 4,-2.5 2,-0.2 -2,-0.2 0.932 112.3 48.2 -68.1 -45.4 -1.0 23.4 11.9 58 74 A V H X S+ 0 0 28 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.941 113.1 48.4 -59.6 -48.2 1.1 23.9 8.7 59 75 A E H X S+ 0 0 87 -4,-3.0 4,-2.5 1,-0.2 -1,-0.2 0.898 111.1 50.8 -59.4 -42.5 -0.9 27.0 7.8 60 76 A T H X S+ 0 0 15 -4,-2.0 4,-2.2 -5,-0.2 5,-0.2 0.913 112.2 46.0 -63.5 -43.7 -0.5 28.4 11.3 61 77 A I H X S+ 0 0 2 -4,-2.5 4,-3.0 2,-0.2 5,-0.3 0.940 113.2 49.1 -65.9 -45.8 3.3 27.9 11.2 62 78 A V H X S+ 0 0 62 -4,-2.7 4,-1.7 1,-0.2 -2,-0.2 0.948 114.2 45.8 -58.6 -48.4 3.7 29.4 7.7 63 79 A K H < S+ 0 0 152 -4,-2.5 -1,-0.2 -5,-0.2 -2,-0.2 0.871 120.5 38.2 -63.9 -37.8 1.6 32.5 8.6 64 80 A T H < S+ 0 0 28 -4,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.810 121.2 41.5 -84.7 -31.8 3.3 33.1 11.9 65 81 A A H < S+ 0 0 7 -4,-3.0 -56,-0.3 -5,-0.2 -2,-0.2 0.636 89.8 104.8 -90.7 -17.7 6.9 32.2 11.0 66 82 A Q < + 0 0 119 -4,-1.7 -58,-0.0 -5,-0.3 -4,-0.0 -0.307 27.9 162.1 -66.5 145.3 7.1 33.8 7.5 67 83 A T - 0 0 45 2,-0.3 -1,-0.1 -2,-0.0 3,-0.1 0.382 53.6-120.1-132.5 -20.7 8.9 37.1 7.0 68 84 A G S S+ 0 0 65 1,-0.4 2,-0.2 0, 0.0 -2,-0.1 0.293 78.5 113.5 94.0 -7.6 9.2 36.9 3.3 69 85 A R S > S- 0 0 177 1,-0.1 3,-0.9 2,-0.0 -1,-0.4 -0.574 78.4 -84.5 -95.3 159.1 13.0 36.9 3.5 70 86 A V T 3 S+ 0 0 146 1,-0.2 -1,-0.1 -2,-0.2 0, 0.0 -0.280 110.2 36.3 -63.0 142.9 15.5 34.1 2.7 71 87 A G T 3 + 0 0 27 2,-0.1 -1,-0.2 -35,-0.1 3,-0.1 0.542 66.9 136.6 92.5 7.8 16.1 31.6 5.5 72 88 A D < - 0 0 32 -3,-0.9 -63,-0.4 1,-0.2 2,-0.1 0.735 60.1-135.3 -59.6 -22.9 12.6 31.5 6.8 73 89 A G - 0 0 41 -65,-0.1 2,-0.3 -37,-0.1 -1,-0.2 -0.465 13.4 -87.4 103.4-172.5 12.9 27.7 7.0 74 90 A K E -B 7 0A 146 -67,-0.6 -67,-2.7 -2,-0.1 2,-0.4 -0.895 15.0-137.5-142.0 167.8 10.8 24.7 6.1 75 91 A I E -B 6 0A 45 -2,-0.3 2,-0.4 -69,-0.2 -69,-0.2 -0.997 15.3-161.7-130.2 131.1 8.2 22.3 7.4 76 92 A F E -B 5 0A 89 -71,-2.8 -71,-2.4 -2,-0.4 2,-0.6 -0.937 7.7-152.0-114.8 138.0 8.4 18.5 6.9 77 93 A I E -B 4 0A 79 -2,-0.4 -73,-0.2 -73,-0.2 -2,-0.0 -0.956 22.4-179.2-109.7 119.1 5.3 16.2 7.3 78 94 A I E -B 3 0A 61 -75,-2.7 -75,-3.4 -2,-0.6 2,-0.0 -0.961 28.5-112.4-122.8 132.1 6.5 12.7 8.4 79 95 A P E -B 2 0A 92 0, 0.0 2,-0.4 0, 0.0 -77,-0.2 -0.360 25.3-161.2 -66.6 144.8 4.3 9.7 9.0 80 96 A V - 0 0 33 -79,-1.7 3,-0.1 1,-0.1 -32,-0.0 -0.998 9.4-165.0-124.8 123.6 4.0 8.4 12.6 81 97 A E S S- 0 0 192 -2,-0.4 2,-0.3 1,-0.3 -1,-0.1 0.722 73.2 -9.2 -82.4 -22.1 2.8 4.9 13.1 82 98 A D - 0 0 60 10,-0.1 2,-0.4 9,-0.0 -1,-0.3 -0.961 52.6-151.2-170.3 157.1 2.1 5.4 16.8 83 99 A V - 0 0 31 -2,-0.3 9,-1.4 -3,-0.1 2,-0.4 -0.982 14.1-161.9-131.9 139.4 2.5 7.7 19.7 84 100 A I B -D 91 0B 87 -2,-0.4 2,-0.7 7,-0.2 7,-0.2 -0.990 15.5-138.1-128.2 131.8 2.8 6.6 23.4 85 101 A R > - 0 0 70 5,-3.0 4,-3.2 -2,-0.4 3,-0.5 -0.814 13.2-153.7 -88.5 116.1 2.2 8.8 26.4 86 102 A I T 4 S+ 0 0 167 -2,-0.7 -1,-0.2 1,-0.2 9,-0.0 0.876 88.2 58.6 -58.8 -39.8 4.9 7.8 28.9 87 103 A R T 4 S+ 0 0 207 1,-0.2 -1,-0.2 -3,-0.1 -2,-0.0 0.865 127.2 10.8 -59.2 -37.4 3.0 8.9 32.0 88 104 A T T 4 S- 0 0 69 -3,-0.5 -2,-0.2 2,-0.1 -1,-0.2 0.597 91.1-118.8-119.7 -18.5 0.0 6.6 31.3 89 105 A G < + 0 0 44 -4,-3.2 -3,-0.1 1,-0.3 6,-0.1 0.514 61.2 151.1 85.3 2.7 0.9 4.1 28.5 90 106 A E - 0 0 70 -5,-0.4 -5,-3.0 4,-0.1 -1,-0.3 -0.355 26.4-162.7 -65.2 150.1 -2.0 5.6 26.4 91 107 A R B > +D 84 0B 155 -7,-0.2 3,-1.5 -3,-0.1 4,-0.3 -0.787 41.3 2.5-129.5 174.5 -1.4 5.4 22.7 92 108 A G G >> S- 0 0 7 -9,-1.4 3,-2.2 1,-0.3 4,-0.8 -0.136 128.3 -1.5 52.3-138.9 -2.8 6.9 19.5 93 109 A E G 34 S+ 0 0 107 1,-0.3 3,-0.4 2,-0.2 -1,-0.3 0.788 134.6 58.6 -53.9 -29.5 -5.4 9.6 19.8 94 110 A Q G <4 S+ 0 0 122 -3,-1.5 -1,-0.3 1,-0.2 -2,-0.2 0.685 103.4 51.9 -75.9 -16.6 -5.3 9.1 23.6 95 111 A A T <4 0 0 8 -3,-2.2 -1,-0.2 -4,-0.3 -2,-0.2 0.567 360.0 360.0 -95.8 -12.3 -1.6 10.0 23.7 96 112 A I < 0 0 62 -4,-0.8 -2,-0.2 -3,-0.4 -70,-0.1 0.879 360.0 360.0 -83.8 360.0 -1.8 13.3 21.8