==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 27-FEB-07 2EG2 . COMPND 2 MOLECULE: NITROGEN REGULATORY PROTEIN P-II; . SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; . AUTHOR H.SAKAI,A.SHINKAI,Y.KITAMURA,S.KURAMITSU,S.YOKOYAMA,RIKEN ST . 95 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6631.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 64.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 26.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 22.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 37 0, 0.0 79,-1.8 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 149.6 -0.9 10.9 13.1 2 2 A K E -AB 49 79A 70 47,-2.5 47,-2.5 77,-0.2 2,-0.5 -0.987 360.0-132.0-139.2 149.0 1.9 13.0 11.7 3 3 A K E -AB 48 78A 50 75,-3.3 75,-2.7 -2,-0.3 2,-0.6 -0.861 18.9-156.5 -96.0 131.2 5.0 14.8 13.0 4 4 A I E -AB 47 77A 1 43,-3.5 43,-2.3 -2,-0.5 2,-0.5 -0.960 10.2-172.2-112.1 117.4 5.4 18.3 11.8 5 5 A E E -AB 46 76A 32 71,-2.6 71,-3.0 -2,-0.6 2,-0.4 -0.968 6.2-179.1-113.1 118.4 9.0 19.5 12.0 6 6 A A E -AB 45 75A 0 39,-2.7 39,-2.7 -2,-0.5 2,-0.6 -0.961 18.2-155.9-123.4 135.6 9.6 23.2 11.3 7 7 A I E +AB 44 74A 34 67,-2.7 67,-0.6 -2,-0.4 2,-0.3 -0.949 30.5 167.9-109.0 119.0 12.9 25.0 11.2 8 8 A I E -A 43 0A 4 35,-3.0 35,-2.8 -2,-0.6 65,-0.1 -0.811 43.3 -82.7-130.1 167.0 12.3 28.7 11.9 9 9 A K > - 0 0 31 63,-0.4 3,-2.0 56,-0.3 4,-0.3 -0.467 45.1-122.7 -66.4 135.8 14.2 32.0 12.8 10 10 A P G > S+ 0 0 55 0, 0.0 3,-1.6 0, 0.0 4,-0.3 0.849 107.7 58.8 -49.9 -41.2 14.8 32.0 16.5 11 11 A F G 3 S+ 0 0 137 1,-0.3 4,-0.3 2,-0.1 3,-0.2 0.611 98.4 61.9 -69.8 -9.2 13.1 35.3 17.2 12 12 A K G <> S+ 0 0 26 -3,-2.0 4,-2.5 1,-0.1 -1,-0.3 0.530 77.9 94.0 -91.5 -4.3 9.9 33.9 15.8 13 13 A L H <> S+ 0 0 39 -3,-1.6 4,-2.9 -4,-0.3 5,-0.2 0.908 82.3 45.9 -57.7 -51.8 9.6 31.2 18.5 14 14 A D H > S+ 0 0 105 -4,-0.3 4,-2.7 1,-0.2 -1,-0.2 0.935 115.1 48.5 -60.3 -43.2 7.4 32.8 21.0 15 15 A E H > S+ 0 0 92 -4,-0.3 4,-2.4 1,-0.2 -1,-0.2 0.919 114.2 45.2 -60.9 -46.3 4.9 34.0 18.4 16 16 A V H X S+ 0 0 0 -4,-2.5 4,-2.3 2,-0.2 -1,-0.2 0.917 113.2 50.4 -65.2 -42.6 4.7 30.6 16.7 17 17 A K H X S+ 0 0 79 -4,-2.9 4,-2.4 -5,-0.2 -2,-0.2 0.932 112.1 47.5 -60.5 -45.5 4.4 28.9 20.1 18 18 A D H X S+ 0 0 85 -4,-2.7 4,-2.2 -5,-0.2 -2,-0.2 0.924 111.8 50.1 -62.4 -44.2 1.6 31.2 21.1 19 19 A A H X S+ 0 0 13 -4,-2.4 4,-1.1 1,-0.2 -1,-0.2 0.869 111.8 48.2 -62.4 -38.8 -0.2 30.8 17.8 20 20 A L H <>S+ 0 0 0 -4,-2.3 5,-2.6 2,-0.2 3,-0.3 0.889 110.0 50.4 -71.1 -38.8 -0.0 27.0 18.1 21 21 A V H ><5S+ 0 0 86 -4,-2.4 3,-1.8 1,-0.2 -2,-0.2 0.919 107.3 57.4 -63.4 -40.0 -1.3 26.9 21.6 22 22 A E H 3<5S+ 0 0 168 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.754 105.4 48.0 -60.1 -33.9 -4.2 29.1 20.4 23 23 A I T 3<5S- 0 0 57 -4,-1.1 -1,-0.3 -3,-0.3 -2,-0.2 0.286 131.0 -92.9 -91.8 10.0 -5.3 26.6 17.8 24 24 A G T < 5 + 0 0 61 -3,-1.8 2,-0.4 1,-0.2 -3,-0.2 0.570 63.9 161.0 98.7 8.1 -5.1 23.9 20.4 25 25 A I < - 0 0 26 -5,-2.6 -1,-0.2 1,-0.2 3,-0.1 -0.488 19.6-166.4 -67.2 121.1 -1.7 22.3 20.3 26 26 A G + 0 0 80 -2,-0.4 2,-0.3 1,-0.2 -1,-0.2 0.837 63.3 13.9 -79.0 -34.8 -1.1 20.4 23.5 27 27 A G + 0 0 53 21,-0.2 2,-0.3 69,-0.1 21,-0.2 -0.971 55.0 177.1-143.6 158.1 2.7 19.8 23.3 28 28 A M - 0 0 52 -2,-0.3 2,-0.5 19,-0.1 19,-0.2 -0.972 18.1-144.3-158.7 146.7 5.8 20.7 21.4 29 29 A T E -C 46 0A 85 17,-2.3 17,-2.3 -2,-0.3 2,-0.4 -0.955 17.4-162.7-116.6 129.5 9.5 20.0 21.5 30 30 A V E -C 45 0A 67 -2,-0.5 2,-0.4 15,-0.2 15,-0.2 -0.934 6.4-174.8-118.8 132.4 12.0 22.7 20.6 31 31 A T E -C 44 0A 60 13,-2.3 13,-2.8 -2,-0.4 2,-0.5 -0.976 25.9-127.7-126.3 137.3 15.7 22.2 19.7 32 32 A E E +C 43 0A 185 -2,-0.4 2,-0.2 11,-0.2 11,-0.2 -0.757 46.2 158.3 -81.1 126.3 18.4 24.8 19.1 33 33 A V E -C 42 0A 42 9,-2.3 9,-2.5 -2,-0.5 2,-0.3 -0.739 33.6-131.4-136.7-179.9 20.0 24.0 15.7 34 34 A K E +C 41 0A 144 7,-0.3 2,-0.3 -2,-0.2 5,-0.1 -0.966 34.8 149.9-134.0 153.9 22.0 25.8 13.0 35 35 A G E C 40 0A 14 5,-2.4 5,-2.3 -2,-0.3 -2,-0.0 -0.957 360.0 360.0-166.0-176.8 21.3 25.8 9.3 36 36 A F 0 0 198 -2,-0.3 3,-0.1 3,-0.2 -2,-0.0 -0.881 360.0 360.0-164.0 360.0 21.4 27.2 5.7 37 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 38 54 A D 0 0 183 0, 0.0 2,-0.4 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 7.9 27.9 29.6 6.8 39 55 A F - 0 0 114 -3,-0.1 -3,-0.2 -5,-0.1 -5,-0.0 -0.725 360.0-165.2 -91.2 139.2 25.5 28.2 9.5 40 56 A L E - C 0 35A 108 -5,-2.3 -5,-2.4 -2,-0.4 2,-0.1 -0.904 32.0 -95.7-118.7 149.0 23.1 30.5 11.2 41 57 A P E + C 0 34A 88 0, 0.0 2,-0.3 0, 0.0 -7,-0.3 -0.395 50.0 168.5 -67.0 139.8 21.2 29.8 14.4 42 58 A K E - C 0 33A 23 -9,-2.5 -9,-2.3 -33,-0.2 2,-0.4 -0.881 29.6-124.5-139.9 170.2 17.6 28.4 13.9 43 59 A V E -AC 8 32A 14 -35,-2.8 -35,-3.0 -2,-0.3 2,-0.5 -0.989 15.8-150.1-123.3 131.7 15.0 26.8 16.1 44 60 A K E -AC 7 31A 49 -13,-2.8 -13,-2.3 -2,-0.4 2,-0.4 -0.866 11.5-168.1-100.1 132.2 13.4 23.4 15.3 45 61 A I E -AC 6 30A 1 -39,-2.7 -39,-2.7 -2,-0.5 2,-0.4 -0.970 1.2-169.6-119.2 134.5 9.9 22.8 16.5 46 62 A E E +AC 5 29A 42 -17,-2.3 -17,-2.3 -2,-0.4 2,-0.4 -0.995 9.5 170.5-124.6 128.8 8.4 19.4 16.5 47 63 A V E -A 4 0A 2 -43,-2.3 -43,-3.5 -2,-0.4 2,-0.5 -0.995 20.1-151.3-135.2 140.2 4.7 18.7 17.1 48 64 A V E +A 3 0A 54 -2,-0.4 2,-0.3 -45,-0.2 -45,-0.2 -0.966 29.4 165.0-112.8 126.4 2.8 15.5 16.6 49 65 A V E -A 2 0A 5 -47,-2.5 -47,-2.5 -2,-0.5 5,-0.1 -0.868 41.5 -83.1-137.5 166.6 -0.8 15.8 15.7 50 66 A R >> - 0 0 64 -2,-0.3 3,-2.1 -49,-0.2 4,-0.6 -0.393 47.4-110.5 -67.1 151.1 -3.9 13.9 14.3 51 67 A D G >4 S+ 0 0 87 1,-0.3 3,-1.1 2,-0.2 4,-0.4 0.864 117.5 56.9 -51.4 -40.8 -4.0 13.7 10.5 52 68 A E G 34 S+ 0 0 136 1,-0.2 -1,-0.3 2,-0.1 4,-0.2 0.554 106.4 50.5 -71.4 -6.6 -7.0 16.1 10.4 53 69 A D G <> S+ 0 0 66 -3,-2.1 4,-1.9 2,-0.1 -1,-0.2 0.483 83.5 90.8-107.8 -4.4 -5.1 18.8 12.2 54 70 A V H S+ 0 0 118 -4,-0.4 4,-2.9 1,-0.2 5,-0.2 0.893 109.5 51.4 -59.1 -41.7 -3.0 21.5 7.6 56 72 A K H > S+ 0 0 113 -4,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.917 112.4 47.4 -62.0 -40.7 -4.2 24.0 10.2 57 73 A V H X S+ 0 0 3 -4,-1.9 4,-2.6 2,-0.2 5,-0.2 0.938 111.8 49.8 -66.9 -43.6 -0.8 23.6 12.0 58 74 A V H X S+ 0 0 25 -4,-2.8 4,-2.8 1,-0.2 -2,-0.2 0.945 112.9 46.1 -59.5 -47.6 1.1 24.0 8.8 59 75 A E H X S+ 0 0 95 -4,-2.9 4,-2.7 1,-0.2 5,-0.2 0.902 111.8 52.1 -64.2 -37.7 -0.8 27.2 7.8 60 76 A T H X S+ 0 0 16 -4,-2.3 4,-2.0 -5,-0.2 5,-0.2 0.924 112.0 45.4 -64.4 -43.8 -0.5 28.6 11.4 61 77 A I H X S+ 0 0 3 -4,-2.6 4,-2.8 2,-0.2 5,-0.3 0.952 113.9 49.8 -66.0 -44.3 3.3 28.1 11.3 62 78 A V H X S+ 0 0 60 -4,-2.8 4,-1.4 -5,-0.2 -2,-0.2 0.943 114.0 44.1 -58.5 -47.7 3.6 29.5 7.8 63 79 A K H < S+ 0 0 162 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.843 120.5 40.2 -68.2 -33.3 1.6 32.6 8.6 64 80 A T H < S+ 0 0 33 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.808 119.6 41.3 -87.2 -31.2 3.3 33.3 11.9 65 81 A A H < S+ 0 0 7 -4,-2.8 -56,-0.3 -5,-0.2 -2,-0.2 0.590 90.2 106.5 -92.1 -13.9 6.9 32.5 11.0 66 82 A Q < + 0 0 115 -4,-1.4 -58,-0.0 -5,-0.3 -4,-0.0 -0.425 28.1 161.6 -70.7 137.5 7.0 34.1 7.6 67 83 A T - 0 0 48 2,-0.3 -1,-0.1 -2,-0.1 3,-0.1 0.462 53.4-119.5-126.3 -21.8 8.8 37.4 7.1 68 84 A G S S+ 0 0 62 1,-0.4 2,-0.2 0, 0.0 -2,-0.1 0.325 79.4 111.6 95.1 -6.8 9.2 37.3 3.4 69 85 A R S > S- 0 0 179 1,-0.1 3,-1.0 2,-0.0 -1,-0.4 -0.598 80.0 -84.6 -97.7 160.4 13.0 37.4 3.6 70 86 A V T 3 S+ 0 0 145 1,-0.2 -1,-0.1 -2,-0.2 0, 0.0 -0.293 110.0 38.2 -62.1 143.4 15.4 34.6 2.8 71 87 A G T 3 + 0 0 30 2,-0.1 -1,-0.2 -3,-0.1 3,-0.1 0.479 65.6 134.9 95.6 2.2 16.0 32.0 5.6 72 88 A D < - 0 0 33 -3,-1.0 -63,-0.4 1,-0.2 2,-0.2 0.772 61.4-133.6 -55.5 -27.9 12.4 31.8 6.9 73 89 A G - 0 0 47 -65,-0.1 2,-0.3 -67,-0.0 -1,-0.2 -0.529 12.4 -88.3 108.2-174.7 12.7 28.1 7.0 74 90 A K E -B 7 0A 148 -67,-0.6 -67,-2.7 -2,-0.2 2,-0.4 -0.937 17.3-138.2-142.1 162.2 10.8 24.9 6.0 75 91 A I E -B 6 0A 46 -2,-0.3 2,-0.4 -69,-0.2 -69,-0.2 -0.981 14.8-162.4-125.4 133.5 8.3 22.5 7.3 76 92 A F E -B 5 0A 95 -71,-3.0 -71,-2.6 -2,-0.4 2,-0.6 -0.949 8.5-150.2-118.0 136.0 8.5 18.7 6.9 77 93 A I E -B 4 0A 80 -2,-0.4 -73,-0.2 -73,-0.2 -2,-0.0 -0.944 21.5-178.2-108.7 119.1 5.5 16.4 7.4 78 94 A I E -B 3 0A 61 -75,-2.7 -75,-3.3 -2,-0.6 2,-0.1 -0.945 27.7-113.4-120.9 133.2 6.7 12.9 8.6 79 95 A P E -B 2 0A 89 0, 0.0 2,-0.5 0, 0.0 -77,-0.2 -0.365 24.1-160.7 -67.3 143.9 4.5 9.9 9.2 80 96 A V - 0 0 34 -79,-1.8 3,-0.1 1,-0.1 -32,-0.0 -0.995 6.6-167.8-125.5 122.3 4.2 8.7 12.8 81 97 A E S S- 0 0 193 -2,-0.5 2,-0.3 1,-0.2 -1,-0.1 0.761 70.8 -0.1 -83.5 -26.2 2.9 5.1 13.3 82 98 A D - 0 0 74 10,-0.1 2,-0.4 9,-0.0 -1,-0.2 -0.986 54.9-156.7-158.7 157.2 2.3 5.3 17.0 83 99 A V - 0 0 29 -2,-0.3 9,-1.6 -3,-0.1 2,-0.4 -0.996 11.8-165.0-136.7 135.1 2.5 7.7 19.9 84 100 A I B -D 91 0B 85 -2,-0.4 2,-0.6 7,-0.2 7,-0.2 -0.987 16.0-139.6-128.7 128.6 2.8 6.6 23.5 85 101 A R > - 0 0 82 5,-3.1 4,-2.8 -2,-0.4 5,-0.3 -0.719 13.9-152.7 -83.8 119.9 2.2 8.7 26.6 86 102 A I T 4 S+ 0 0 167 -2,-0.6 -1,-0.2 1,-0.2 9,-0.0 0.903 87.7 55.9 -63.8 -39.7 4.9 7.8 29.1 87 103 A R T 4 S+ 0 0 208 1,-0.2 -1,-0.2 2,-0.1 -2,-0.0 0.864 127.5 14.0 -60.6 -36.9 2.9 8.7 32.3 88 104 A T T 4 S- 0 0 58 -3,-0.2 -2,-0.2 2,-0.1 -1,-0.2 0.604 91.1-120.2-117.0 -17.7 -0.0 6.5 31.5 89 105 A G < + 0 0 44 -4,-2.8 -3,-0.1 1,-0.3 6,-0.1 0.492 59.9 151.9 84.0 0.7 0.8 4.1 28.7 90 106 A E - 0 0 68 -5,-0.3 -5,-3.1 4,-0.1 -1,-0.3 -0.346 26.5-161.0 -64.1 148.2 -2.0 5.6 26.6 91 107 A R B > -D 84 0B 150 -7,-0.2 3,-2.0 -3,-0.1 4,-0.3 -0.794 38.3 -9.8-128.5 171.7 -1.4 5.3 22.9 92 108 A G G >> S+ 0 0 16 -9,-1.6 3,-2.2 1,-0.3 4,-0.9 -0.058 129.0 6.5 46.7-131.2 -2.5 6.8 19.6 93 109 A E G 34 S+ 0 0 91 1,-0.3 3,-0.3 2,-0.2 -1,-0.3 0.781 133.2 55.5 -52.8 -29.3 -5.5 9.1 19.8 94 110 A Q G <4 S+ 0 0 127 -3,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.634 107.3 49.6 -82.2 -12.0 -5.4 8.8 23.6 95 111 A A T <4 0 0 10 -3,-2.2 -1,-0.2 -4,-0.3 -2,-0.2 0.493 360.0 360.0-104.6 -8.0 -1.8 10.0 23.7 96 112 A I < 0 0 64 -4,-0.9 -2,-0.1 -3,-0.3 -70,-0.1 0.892 360.0 360.0 -89.9 360.0 -2.0 13.1 21.6