==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIVIRAL PROTEIN 01-MAR-07 2EGP . COMPND 2 MOLECULE: TRIPARTITE MOTIF-CONTAINING PROTEIN 34; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.INOUE,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7449.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 21.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -75.3 37.7 -16.0 2.5 2 2 A S - 0 0 102 3,-0.0 2,-0.3 2,-0.0 0, 0.0 -0.725 360.0-154.7-101.1 150.4 37.6 -12.3 3.4 3 3 A S + 0 0 127 -2,-0.3 3,-0.1 1,-0.1 4,-0.1 -0.935 67.0 40.3-125.4 147.6 34.6 -10.6 5.0 4 4 A G S S+ 0 0 48 1,-0.4 3,-0.5 -2,-0.3 2,-0.3 -0.049 87.3 101.5 110.4 -31.5 33.5 -6.9 5.0 5 5 A S S S+ 0 0 81 1,-0.2 -1,-0.4 2,-0.1 -3,-0.0 -0.644 86.7 9.5 -89.6 144.9 34.3 -6.2 1.3 6 6 A S S S+ 0 0 131 -2,-0.3 -1,-0.2 -3,-0.1 -2,-0.1 0.948 110.3 86.2 54.0 54.0 31.6 -6.2 -1.4 7 7 A G + 0 0 58 -3,-0.5 2,-0.3 -4,-0.1 -1,-0.1 0.066 44.6 113.1-173.5 44.5 28.8 -6.3 1.2 8 8 A N + 0 0 130 2,-0.0 2,-0.3 0, 0.0 -2,-0.1 -0.665 40.4 116.9-127.0 76.5 27.9 -2.8 2.5 9 9 A V - 0 0 123 -2,-0.3 2,-0.6 -3,-0.1 0, 0.0 -0.959 36.6-170.4-146.7 124.3 24.3 -2.0 1.3 10 10 A Q + 0 0 183 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.854 25.1 152.5-118.4 95.7 21.2 -1.4 3.4 11 11 A E - 0 0 132 -2,-0.6 2,-0.7 2,-0.0 -2,-0.1 -0.973 36.3-151.1-126.7 138.5 18.1 -1.2 1.2 12 12 A E + 0 0 179 -2,-0.4 21,-0.3 1,-0.1 -2,-0.0 -0.579 49.0 130.9-106.0 68.4 14.5 -2.0 2.1 13 13 A V + 0 0 71 -2,-0.7 9,-0.7 2,-0.1 2,-0.4 -0.322 38.7 108.3-113.9 48.4 13.1 -3.1 -1.3 14 14 A T E S-A 21 0A 79 7,-0.1 7,-0.2 19,-0.0 19,-0.1 -0.983 78.1-108.5-130.8 123.8 11.4 -6.3 -0.2 15 15 A C E >> -A 20 0A 0 5,-0.6 4,-1.8 -2,-0.4 5,-0.6 -0.257 25.1-160.2 -50.8 108.9 7.7 -6.9 0.1 16 16 A P T 45S+ 0 0 65 0, 0.0 -1,-0.2 0, 0.0 18,-0.1 0.573 85.4 58.2 -69.8 -8.7 7.1 -7.1 3.9 17 17 A I T 45S+ 0 0 67 3,-0.1 -2,-0.0 1,-0.1 17,-0.0 0.956 122.0 15.8 -84.1 -69.6 3.8 -8.8 3.1 18 18 A C T 45S- 0 0 50 2,-0.0 -1,-0.1 0, 0.0 -3,-0.1 0.661 98.6-133.3 -79.5 -17.0 4.7 -12.0 1.2 19 19 A L T <5 + 0 0 123 -4,-1.8 2,-0.2 1,-0.2 -5,-0.0 0.980 59.9 121.9 61.9 59.6 8.3 -11.6 2.2 20 20 A E E < -A 15 0A 122 -5,-0.6 -5,-0.6 1,-0.0 2,-0.3 -0.738 66.7 -69.3-137.2-175.1 9.9 -12.1 -1.2 21 21 A L E -A 14 0A 149 -2,-0.2 2,-0.5 -7,-0.2 -7,-0.1 -0.604 42.8-134.7 -83.8 141.3 12.1 -10.4 -3.8 22 22 A L + 0 0 26 -9,-0.7 -9,-0.0 -2,-0.3 13,-0.0 -0.828 27.9 169.1 -99.7 131.0 10.8 -7.4 -5.7 23 23 A T S S- 0 0 132 -2,-0.5 -1,-0.1 1,-0.0 12,-0.0 0.740 82.4 -8.5-106.1 -36.0 11.3 -7.1 -9.4 24 24 A E S S+ 0 0 139 10,-0.0 12,-0.1 2,-0.0 10,-0.0 -0.315 79.3 170.6-164.6 68.4 9.1 -4.2 -10.3 25 25 A P - 0 0 37 0, 0.0 2,-0.4 0, 0.0 10,-0.2 0.108 34.4-111.0 -69.8-171.2 6.9 -2.9 -7.4 26 26 A L - 0 0 69 8,-1.0 8,-0.3 6,-0.1 6,-0.2 -0.891 23.2-129.4-133.6 103.6 4.8 0.2 -7.2 27 27 A S - 0 0 81 -2,-0.4 6,-0.2 6,-0.2 0, 0.0 -0.270 29.8-144.0 -52.2 120.6 5.9 3.0 -4.9 28 28 A L - 0 0 7 4,-2.5 -1,-0.1 1,-0.1 37,-0.0 -0.056 25.9 -96.5 -77.3-175.8 2.8 4.0 -2.8 29 29 A D S S+ 0 0 85 1,-0.2 -1,-0.1 32,-0.2 33,-0.1 0.920 125.5 46.7 -69.8 -45.4 1.8 7.5 -1.7 30 30 A C S S- 0 0 49 31,-0.2 -1,-0.2 2,-0.1 -3,-0.1 0.786 129.6 -94.9 -67.4 -27.5 3.4 7.0 1.8 31 31 A G S S+ 0 0 49 1,-0.2 2,-0.4 0, 0.0 -2,-0.1 0.784 75.9 133.9 111.4 57.1 6.5 5.6 0.2 32 32 A H - 0 0 62 -6,-0.2 -4,-2.5 -19,-0.0 2,-0.5 -0.999 41.4-143.4-138.6 138.7 6.3 1.8 0.1 33 33 A S + 0 0 35 -2,-0.4 2,-0.3 -21,-0.3 -6,-0.2 -0.865 27.0 165.6-104.7 131.8 7.0 -0.7 -2.6 34 34 A L - 0 0 1 -2,-0.5 -8,-1.0 -8,-0.3 -10,-0.0 -0.896 38.7 -85.5-138.2 167.3 5.0 -3.9 -3.0 35 35 A C > - 0 0 28 -2,-0.3 4,-1.2 -10,-0.2 5,-0.2 -0.277 34.7-118.9 -70.8 159.2 4.3 -6.7 -5.5 36 36 A R H > S+ 0 0 171 2,-0.2 4,-1.4 1,-0.2 -1,-0.1 0.770 115.1 44.1 -69.3 -25.9 1.7 -6.3 -8.3 37 37 A A H 4 S+ 0 0 75 2,-0.2 -1,-0.2 1,-0.1 -3,-0.0 0.929 107.1 54.6 -83.2 -52.2 -0.1 -9.2 -6.8 38 38 A C H 4 S+ 0 0 52 1,-0.1 -2,-0.2 3,-0.1 -1,-0.1 0.801 119.3 38.7 -51.9 -30.1 -0.0 -8.4 -3.1 39 39 A I H < S+ 0 0 14 -4,-1.2 -2,-0.2 15,-0.1 -3,-0.1 0.954 105.1 64.7 -83.9 -72.2 -1.6 -5.0 -4.1 40 40 A T S < S- 0 0 78 -4,-1.4 2,-0.4 -5,-0.2 -5,-0.0 -0.143 70.8-153.3 -53.2 147.7 -4.1 -5.8 -6.9 41 41 A V + 0 0 99 1,-0.1 3,-0.1 3,-0.0 -1,-0.1 -0.993 26.2 165.7-132.6 129.8 -7.1 -7.9 -5.8 42 42 A S + 0 0 122 -2,-0.4 2,-1.2 1,-0.2 -1,-0.1 0.823 64.4 73.5-104.2 -53.6 -9.2 -10.2 -8.0 43 43 A N + 0 0 126 2,-0.1 2,-0.7 1,-0.0 -1,-0.2 -0.509 63.0 175.1 -68.9 96.0 -11.2 -12.3 -5.6 44 44 A K + 0 0 125 -2,-1.2 -1,-0.0 1,-0.1 8,-0.0 -0.898 17.0 159.9-110.3 107.4 -13.7 -9.8 -4.3 45 45 A E + 0 0 153 -2,-0.7 2,-1.4 2,-0.0 3,-0.3 -0.035 29.8 130.0-113.1 28.6 -16.4 -11.3 -1.9 46 46 A A + 0 0 42 1,-0.2 5,-0.1 2,-0.1 -2,-0.0 -0.667 21.7 125.2 -87.4 88.4 -17.4 -8.0 -0.3 47 47 A V S S+ 0 0 127 -2,-1.4 -1,-0.2 3,-0.1 -2,-0.0 0.808 70.4 44.1-106.9 -59.7 -21.2 -8.0 -0.6 48 48 A T S S+ 0 0 142 -3,-0.3 2,-0.3 2,-0.0 -2,-0.1 0.784 122.6 43.8 -58.9 -27.2 -22.6 -7.5 2.9 49 49 A S S S- 0 0 73 2,-0.1 2,-0.1 1,-0.0 -1,-0.0 -0.924 80.5-135.5-122.9 147.2 -20.1 -4.8 3.3 50 50 A M + 0 0 189 -2,-0.3 -3,-0.1 2,-0.0 2,-0.0 -0.242 52.2 84.9 -89.1-179.0 -18.9 -2.0 1.0 51 51 A G - 0 0 51 1,-0.1 -5,-0.1 -5,-0.1 -2,-0.1 0.004 30.6-179.4 103.5 149.6 -15.4 -0.8 0.3 52 52 A G + 0 0 62 -2,-0.0 2,-0.4 -8,-0.0 -1,-0.1 -0.063 29.4 127.8 176.4 69.2 -12.7 -1.9 -2.1 53 53 A K - 0 0 185 11,-0.0 2,-0.2 0, 0.0 10,-0.0 -0.969 60.8-111.5-139.6 121.6 -9.4 -0.0 -2.2 54 54 A S - 0 0 44 -2,-0.4 9,-0.3 1,-0.1 -14,-0.1 -0.285 43.1-161.9 -52.0 112.6 -5.9 -1.5 -1.9 55 55 A S - 0 0 87 -2,-0.2 7,-0.1 -16,-0.1 -1,-0.1 -0.182 26.9 -91.9 -88.6-175.4 -4.7 -0.4 1.5 56 56 A C + 0 0 4 1,-0.1 3,-0.4 -2,-0.1 4,-0.1 -0.819 34.5 179.4-105.9 95.9 -1.1 -0.3 2.9 57 57 A P S S+ 0 0 83 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.559 79.3 66.1 -69.7 -7.4 -0.4 -3.6 4.8 58 58 A V S S- 0 0 49 3,-0.1 -2,-0.0 -3,-0.1 -3,-0.0 0.902 135.2 -24.2 -80.6 -45.0 3.1 -2.2 5.5 59 59 A C S S- 0 0 74 -3,-0.4 -3,-0.0 2,-0.1 -27,-0.0 0.533 91.4-106.8-135.8 -41.6 2.0 0.6 7.8 60 60 A G + 0 0 49 1,-0.2 2,-0.3 -4,-0.1 -5,-0.0 0.758 51.9 153.4 104.0 86.3 -1.6 1.5 6.9 61 61 A I - 0 0 77 0, 0.0 -31,-0.2 0, 0.0 2,-0.2 -0.867 45.2-121.4-148.6 110.0 -2.2 4.8 5.1 62 62 A S + 0 0 126 -2,-0.3 2,-0.2 -7,-0.1 -7,-0.1 -0.284 49.9 162.0 -52.0 112.1 -5.2 5.5 2.8 63 63 A Y - 0 0 19 -9,-0.3 2,-0.3 -2,-0.2 -1,-0.0 -0.598 25.3-143.7-124.2-174.5 -3.6 6.3 -0.6 64 64 A S - 0 0 38 -2,-0.2 4,-0.4 -11,-0.0 -11,-0.0 -0.987 22.3-129.1-152.5 157.4 -4.7 6.4 -4.2 65 65 A F S S+ 0 0 92 -2,-0.3 4,-0.1 1,-0.2 -37,-0.0 0.024 105.1 56.1 -96.5 26.3 -3.3 5.7 -7.7 66 66 A E S > S+ 0 0 127 2,-0.1 3,-0.5 3,-0.0 -1,-0.2 0.628 87.6 68.1-123.0 -37.1 -4.3 9.2 -8.9 67 67 A H G >> S+ 0 0 106 1,-0.2 3,-0.9 2,-0.2 4,-0.8 0.814 97.5 59.4 -56.3 -31.0 -2.6 11.6 -6.5 68 68 A L G 34 S+ 0 0 84 -4,-0.4 -1,-0.2 1,-0.2 3,-0.1 0.910 117.7 28.6 -65.0 -43.6 0.7 10.5 -8.0 69 69 A Q G <4 S+ 0 0 164 -3,-0.5 -1,-0.2 1,-0.1 -2,-0.2 -0.027 102.5 89.1-106.9 28.4 -0.3 11.6 -11.5 70 70 A A T <4 S+ 0 0 59 -3,-0.9 2,-0.4 1,-0.3 -2,-0.1 0.887 92.4 26.8 -89.3 -47.9 -2.6 14.4 -10.3 71 71 A N < + 0 0 109 -4,-0.8 -1,-0.3 1,-0.1 4,-0.0 -0.958 52.8 154.3-122.0 137.4 -0.2 17.3 -10.0 72 72 A Q S S+ 0 0 184 -2,-0.4 -1,-0.1 -3,-0.1 3,-0.1 0.630 81.3 23.7-125.0 -42.2 3.0 17.8 -12.0 73 73 A H S S+ 0 0 183 1,-0.2 2,-1.1 2,-0.0 -2,-0.1 0.919 111.2 62.0 -91.2 -68.8 3.7 21.5 -12.1 74 74 A L S S+ 0 0 122 1,-0.0 2,-0.4 2,-0.0 -1,-0.2 -0.469 72.4 171.0 -65.2 97.7 1.9 23.1 -9.1 75 75 A A - 0 0 80 -2,-1.1 2,-0.2 -3,-0.1 -3,-0.0 -0.908 28.9-126.6-115.1 140.7 3.7 21.4 -6.2 76 76 A N - 0 0 140 -2,-0.4 2,-0.3 1,-0.1 -2,-0.0 -0.522 29.9-106.3 -83.2 150.3 3.4 22.2 -2.5 77 77 A I + 0 0 157 -2,-0.2 -1,-0.1 1,-0.1 0, 0.0 -0.558 32.7 176.7 -78.1 137.2 6.4 22.9 -0.4 78 78 A V 0 0 135 -2,-0.3 -1,-0.1 1,-0.1 -2,-0.0 0.645 360.0 360.0-110.1 -26.0 7.5 20.2 2.1 79 79 A E 0 0 214 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.439 360.0 360.0-126.4 360.0 10.6 21.8 3.5