==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 05-MAR-07 2EH9 . COMPND 2 MOLECULE: AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1B; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.NIWA,A.SHIMADA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEO . 110 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6508.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 69.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 48 43.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 7 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 1 1 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A E 0 0 169 0, 0.0 35,-2.6 0, 0.0 2,-0.0 0.000 360.0 360.0 360.0 176.7 53.4 7.6 22.5 2 3 A K B > -A 35 0A 158 33,-0.3 3,-2.0 1,-0.1 33,-0.3 -0.326 360.0-114.2 -70.8 153.5 51.2 5.7 20.1 3 4 A I G > S+ 0 0 16 31,-2.8 3,-2.4 1,-0.3 32,-0.1 0.797 111.0 74.7 -57.6 -30.3 47.4 5.7 20.4 4 5 A T G > S+ 0 0 78 30,-0.3 3,-2.3 1,-0.3 4,-0.3 0.784 78.1 77.1 -53.9 -27.9 47.5 2.0 21.2 5 6 A K G X S+ 0 0 50 -3,-2.0 3,-2.0 1,-0.3 -1,-0.3 0.791 75.9 75.0 -54.0 -29.3 48.9 3.1 24.6 6 7 A V G < S+ 0 0 4 -3,-2.4 3,-0.4 1,-0.3 -1,-0.3 0.590 81.9 70.1 -63.2 -8.5 45.3 4.1 25.6 7 8 A Y G < S+ 0 0 64 -3,-2.3 3,-0.3 1,-0.2 -1,-0.3 0.737 101.7 43.6 -79.1 -24.0 44.5 0.4 26.0 8 9 A E S < S+ 0 0 132 -3,-2.0 -1,-0.2 -4,-0.3 -2,-0.2 0.254 85.5 88.9-106.2 11.7 46.7 0.2 29.1 9 10 A L S S+ 0 0 54 -3,-0.4 2,-0.3 -4,-0.2 -1,-0.2 0.582 101.8 15.8 -82.4 -9.2 45.6 3.3 30.9 10 11 A G - 0 0 24 -3,-0.3 -1,-0.0 -4,-0.1 37,-0.0 -0.932 59.5-136.2-153.1 175.1 42.8 1.3 32.5 11 12 A N + 0 0 154 -2,-0.3 -1,-0.0 4,-0.0 -3,-0.0 0.388 54.5 136.2-116.2 -3.6 41.5 -2.2 33.3 12 13 A E > - 0 0 24 1,-0.1 3,-0.9 2,-0.1 4,-0.4 -0.112 56.9-132.7 -48.6 141.2 37.8 -1.6 32.4 13 14 A P T 3 S+ 0 0 115 0, 0.0 4,-0.4 0, 0.0 3,-0.3 0.890 104.4 48.6 -63.5 -42.0 36.3 -4.5 30.4 14 15 A E T 3> S+ 0 0 106 1,-0.2 4,-2.0 2,-0.1 5,-0.2 0.373 86.0 92.6 -82.4 2.8 34.7 -2.2 27.9 15 16 A R H <> S+ 0 0 4 -3,-0.9 4,-3.0 2,-0.2 5,-0.2 0.972 83.1 48.8 -62.2 -57.2 37.8 -0.1 27.2 16 17 A K H > S+ 0 0 111 -4,-0.4 4,-2.5 -3,-0.3 5,-0.2 0.894 114.5 45.8 -50.9 -47.1 39.2 -2.1 24.2 17 18 A L H > S+ 0 0 115 -4,-0.4 4,-2.2 2,-0.2 -1,-0.2 0.891 112.7 49.1 -67.0 -41.0 35.9 -2.1 22.4 18 19 A W H X S+ 0 0 10 -4,-2.0 4,-3.3 2,-0.2 -2,-0.2 0.946 112.2 50.5 -63.0 -45.8 35.2 1.6 23.0 19 20 A V H X S+ 0 0 1 -4,-3.0 4,-3.4 2,-0.2 5,-0.3 0.946 113.1 42.8 -58.2 -51.7 38.7 2.4 21.8 20 21 A D H X S+ 0 0 50 -4,-2.5 4,-1.8 1,-0.2 -1,-0.2 0.875 114.8 51.3 -65.8 -32.5 38.5 0.4 18.6 21 22 A R H X S+ 0 0 54 -4,-2.2 4,-1.7 -5,-0.2 -1,-0.2 0.940 114.0 45.0 -66.0 -44.6 35.0 1.7 18.0 22 23 A Y H X S+ 0 0 3 -4,-3.3 4,-2.5 1,-0.2 -2,-0.2 0.928 112.5 49.0 -64.8 -47.6 36.3 5.3 18.6 23 24 A L H X S+ 0 0 22 -4,-3.4 4,-2.0 1,-0.2 10,-0.2 0.851 109.9 53.2 -62.9 -32.9 39.4 4.9 16.4 24 25 A T H X S+ 0 0 84 -4,-1.8 4,-2.4 -5,-0.3 -1,-0.2 0.880 108.7 49.9 -68.7 -38.9 37.2 3.4 13.6 25 26 A F H X S+ 0 0 4 -4,-1.7 4,-2.0 2,-0.2 -2,-0.2 0.929 110.1 49.7 -64.5 -46.4 35.0 6.5 13.8 26 27 A X H <>S+ 0 0 7 -4,-2.5 5,-2.5 1,-0.2 4,-0.3 0.895 112.3 47.6 -62.2 -39.0 37.9 8.9 13.6 27 28 A E H ><5S+ 0 0 135 -4,-2.0 3,-1.5 1,-0.2 -1,-0.2 0.933 109.3 55.6 -65.3 -43.9 39.3 7.0 10.5 28 29 A E H 3<5S+ 0 0 130 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.848 108.5 45.9 -58.0 -38.0 35.8 7.1 9.0 29 30 A R T 3<5S- 0 0 126 -4,-2.0 -1,-0.3 -5,-0.1 -2,-0.2 0.420 121.8-103.4 -88.4 3.0 35.5 10.9 9.3 30 31 A G T < 5S+ 0 0 62 -3,-1.5 -3,-0.2 -4,-0.3 -2,-0.1 0.566 95.9 99.9 90.7 9.1 39.0 11.4 7.9 31 32 A S < - 0 0 38 -5,-2.5 -4,-0.2 -6,-0.2 -3,-0.1 -0.443 53.2-172.7-126.2 62.0 40.8 12.3 11.1 32 33 A P - 0 0 86 0, 0.0 2,-0.7 0, 0.0 -8,-0.1 -0.167 18.7-135.4 -54.2 143.5 42.6 9.1 12.2 33 34 A V + 0 0 20 -10,-0.2 -6,-0.1 1,-0.2 3,-0.1 -0.910 36.5 157.5-106.2 111.4 44.3 9.2 15.6 34 35 A S + 0 0 89 -2,-0.7 -31,-2.8 1,-0.1 2,-0.4 0.754 61.1 56.6-102.4 -31.0 47.8 7.7 15.5 35 36 A S B S-A 2 0A 73 -33,-0.3 -33,-0.3 -32,-0.1 -1,-0.1 -0.820 89.9-110.3-105.5 142.5 49.3 9.4 18.6 36 37 A L - 0 0 16 -35,-2.6 -33,-0.1 -2,-0.4 9,-0.1 -0.539 43.6-115.5 -69.7 126.3 47.9 9.2 22.1 37 38 A P - 0 0 3 0, 0.0 7,-2.6 0, 0.0 2,-0.3 -0.152 34.9-165.2 -59.8 159.3 46.6 12.6 23.0 38 39 A A E -B 43 0B 38 5,-0.3 2,-0.7 -3,-0.1 4,-0.1 -0.992 25.2-139.3-148.9 153.2 48.2 14.6 25.8 39 40 A V E > S-B 42 0B 7 3,-2.5 3,-1.2 -2,-0.3 2,-0.9 -0.933 83.9 -46.5-113.5 101.3 47.5 17.7 27.9 40 41 A G T 3 S- 0 0 79 -2,-0.7 38,-0.1 1,-0.3 -2,-0.0 -0.643 124.3 -25.5 76.4-107.4 50.8 19.4 28.1 41 42 A K T 3 S+ 0 0 183 -2,-0.9 -1,-0.3 2,-0.1 36,-0.0 0.686 117.2 95.4-108.1 -31.0 53.2 16.6 28.9 42 43 A K E < S-B 39 0B 89 -3,-1.2 -3,-2.5 1,-0.1 2,-0.1 -0.397 79.5-110.5 -72.0 138.4 50.8 14.1 30.6 43 44 A P E -B 38 0B 68 0, 0.0 2,-0.6 0, 0.0 -5,-0.3 -0.369 29.2-135.1 -64.4 138.5 49.0 11.3 28.6 44 45 A L - 0 0 0 -7,-2.6 2,-1.4 -2,-0.1 3,-0.1 -0.878 2.0-145.3-107.0 116.1 45.3 11.8 28.2 45 46 A D > - 0 0 20 -2,-0.6 4,-2.2 30,-0.3 5,-0.2 -0.629 17.4-175.0 -76.8 93.7 43.0 8.8 28.8 46 47 A L H > S+ 0 0 2 -2,-1.4 4,-2.4 1,-0.2 -1,-0.2 0.805 77.7 56.9 -61.5 -32.3 40.4 9.5 26.1 47 48 A F H > S+ 0 0 6 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.965 111.3 39.1 -64.9 -54.5 38.2 6.5 27.3 48 49 A R H > S+ 0 0 86 1,-0.2 4,-2.6 2,-0.2 5,-0.3 0.893 115.2 55.1 -64.1 -38.0 37.8 7.7 30.9 49 50 A L H X S+ 0 0 1 -4,-2.2 4,-2.2 1,-0.2 5,-0.2 0.940 109.9 46.4 -59.6 -46.3 37.5 11.3 29.7 50 51 A Y H X S+ 0 0 14 -4,-2.4 4,-2.0 2,-0.2 -2,-0.2 0.929 113.3 48.2 -61.1 -47.6 34.6 10.3 27.4 51 52 A V H X S+ 0 0 41 -4,-2.4 4,-1.9 1,-0.2 -2,-0.2 0.908 114.4 44.5 -62.0 -44.9 32.8 8.2 30.0 52 53 A C H X S+ 0 0 24 -4,-2.6 4,-2.3 2,-0.2 -1,-0.2 0.849 111.3 51.8 -72.3 -34.0 33.0 10.9 32.7 53 54 A V H X>S+ 0 0 0 -4,-2.2 5,-3.1 -5,-0.3 4,-1.7 0.904 111.2 50.6 -66.7 -35.8 32.0 13.8 30.4 54 55 A K H <5S+ 0 0 136 -4,-2.0 -2,-0.2 -5,-0.2 -1,-0.2 0.890 106.7 53.5 -67.1 -38.5 29.1 11.6 29.5 55 56 A E H <5S+ 0 0 141 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.942 110.5 47.2 -60.0 -46.2 28.3 11.0 33.2 56 57 A I H <5S- 0 0 46 -4,-2.3 -1,-0.2 -5,-0.1 -2,-0.2 0.805 128.8-100.0 -65.9 -29.0 28.2 14.8 33.6 57 58 A G T <5 - 0 0 45 -4,-1.7 4,-0.3 -5,-0.2 -3,-0.2 0.556 63.3 -67.9 121.7 10.5 26.0 15.2 30.5 58 59 A G S > S+ 0 0 20 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.881 132.1 50.4 -45.4 -54.4 30.4 19.2 26.7 60 61 A A H > S+ 0 0 67 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.880 113.2 47.1 -56.5 -40.7 27.7 21.8 27.4 61 62 A Q H > S+ 0 0 69 -3,-0.4 4,-2.9 -4,-0.3 -1,-0.2 0.885 109.1 52.2 -70.8 -38.6 27.1 20.3 30.8 62 63 A V H <>S+ 0 0 0 -4,-2.5 5,-2.2 2,-0.2 6,-0.4 0.909 113.9 46.1 -63.2 -39.4 30.8 20.1 31.7 63 64 A N H ><5S+ 0 0 48 -4,-2.4 3,-1.4 -5,-0.3 -2,-0.2 0.964 113.4 47.8 -63.5 -54.1 31.0 23.8 30.7 64 65 A K H 3<5S+ 0 0 144 -4,-2.7 -2,-0.2 1,-0.3 -1,-0.2 0.884 117.1 42.4 -54.7 -43.6 27.8 24.8 32.6 65 66 A N T 3<5S- 0 0 75 -4,-2.9 -1,-0.3 -5,-0.1 -2,-0.2 0.386 104.5-129.6 -87.4 3.9 29.0 23.0 35.8 66 67 A K T < 5 + 0 0 169 -3,-1.4 4,-0.3 -4,-0.3 3,-0.2 0.910 57.4 145.8 47.4 53.4 32.6 24.2 35.5 67 68 A K >< + 0 0 66 -5,-2.2 4,-2.4 1,-0.2 5,-0.2 0.399 33.0 98.8-100.0 2.1 34.0 20.7 35.8 68 69 A W H > S+ 0 0 19 -6,-0.4 4,-2.3 1,-0.2 5,-0.2 0.861 84.6 48.9 -59.1 -37.1 37.0 20.9 33.5 69 70 A R H > S+ 0 0 127 -3,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.904 111.4 49.2 -70.2 -40.7 39.4 21.4 36.4 70 71 A E H > S+ 0 0 95 -4,-0.3 4,-2.7 2,-0.2 -2,-0.2 0.916 113.0 47.5 -63.7 -42.7 38.0 18.5 38.4 71 72 A L H X S+ 0 0 8 -4,-2.4 4,-2.4 2,-0.2 -2,-0.2 0.910 110.1 51.4 -65.1 -43.7 38.3 16.2 35.3 72 73 A A H <>S+ 0 0 0 -4,-2.3 5,-2.4 -5,-0.2 4,-0.4 0.907 112.3 48.5 -59.2 -40.1 41.8 17.3 34.6 73 74 A T H ><5S+ 0 0 57 -4,-2.1 3,-1.2 1,-0.2 -2,-0.2 0.944 111.8 47.7 -64.3 -48.8 42.6 16.5 38.2 74 75 A N H 3<5S+ 0 0 105 -4,-2.7 -2,-0.2 1,-0.3 -1,-0.2 0.812 114.2 47.1 -63.0 -31.6 40.9 13.1 38.0 75 76 A L T 3<5S- 0 0 20 -4,-2.4 -30,-0.3 3,-0.2 -1,-0.3 0.445 110.3-124.2 -89.7 -1.2 42.7 12.3 34.7 76 77 A N T < 5S+ 0 0 129 -3,-1.2 -3,-0.2 -4,-0.4 -2,-0.1 0.931 74.8 121.6 57.9 51.1 46.1 13.5 36.1 77 78 A V S S- 0 0 53 1,-0.1 4,-1.9 -8,-0.1 5,-0.1 -0.254 84.1-113.0 -81.4 170.9 45.5 24.5 37.0 81 82 A S H > S+ 0 0 69 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.788 121.3 58.3 -71.8 -27.3 43.0 26.5 35.0 82 83 A S H > S+ 0 0 85 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.893 105.9 46.9 -67.1 -42.2 45.5 26.2 32.2 83 84 A A H > S+ 0 0 10 2,-0.2 4,-2.4 1,-0.2 -2,-0.2 0.901 112.3 51.2 -65.6 -41.7 45.3 22.4 32.4 84 85 A A H X S+ 0 0 9 -4,-1.9 4,-2.1 2,-0.2 -2,-0.2 0.898 110.1 48.4 -62.7 -42.9 41.4 22.7 32.5 85 86 A S H X S+ 0 0 65 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.899 112.8 48.4 -64.9 -42.0 41.3 24.9 29.4 86 87 A S H X S+ 0 0 44 -4,-2.1 4,-2.4 2,-0.2 -2,-0.2 0.893 109.2 52.9 -64.8 -41.5 43.6 22.6 27.5 87 88 A L H X S+ 0 0 0 -4,-2.4 4,-2.6 1,-0.2 -2,-0.2 0.915 107.5 51.8 -60.9 -42.9 41.6 19.6 28.5 88 89 A K H X S+ 0 0 70 -4,-2.1 4,-2.2 1,-0.2 -1,-0.2 0.892 110.0 49.9 -60.6 -39.4 38.4 21.2 27.2 89 90 A K H X S+ 0 0 124 -4,-1.7 4,-2.5 1,-0.2 -1,-0.2 0.919 110.9 48.3 -65.7 -44.1 40.2 21.9 23.9 90 91 A Q H X S+ 0 0 30 -4,-2.4 4,-2.8 2,-0.2 5,-0.5 0.876 109.3 53.5 -64.3 -38.6 41.3 18.3 23.6 91 92 A Y H X>S+ 0 0 2 -4,-2.6 4,-2.8 2,-0.2 5,-1.9 0.953 110.9 46.9 -60.8 -46.4 37.8 17.0 24.4 92 93 A I H <>S+ 0 0 69 -4,-2.2 5,-0.5 3,-0.2 4,-0.3 0.933 116.5 43.3 -61.4 -45.9 36.4 19.2 21.6 93 94 A Q H <5S+ 0 0 125 -4,-2.5 -1,-0.2 1,-0.1 -2,-0.2 0.855 128.1 25.9 -70.1 -36.8 39.1 18.1 19.1 94 95 A Y H <5S+ 0 0 57 -4,-2.8 -3,-0.2 -5,-0.2 -2,-0.2 0.808 134.1 17.5 -98.5 -32.3 39.1 14.4 19.9 95 96 A L T X5S+ 0 0 0 -4,-2.8 4,-2.6 -5,-0.5 3,-0.3 0.698 96.4 80.6-118.6 -23.1 35.7 13.6 21.3 96 97 A F H > S+ 0 0 1 -3,-0.3 4,-2.5 2,-0.2 5,-0.2 0.935 112.0 48.3 -64.9 -46.7 31.8 11.4 18.5 99 100 A E H X S+ 0 0 40 -4,-2.6 4,-2.8 1,-0.2 -2,-0.2 0.938 114.4 47.3 -56.3 -50.0 29.5 12.7 21.3 100 101 A C H X S+ 0 0 37 -4,-3.1 4,-2.1 1,-0.2 6,-0.2 0.924 112.5 47.6 -59.6 -49.6 27.4 14.6 18.7 101 102 A K H <>S+ 0 0 53 -4,-2.8 5,-1.7 -5,-0.2 6,-1.4 0.887 115.3 45.5 -61.8 -40.8 27.1 11.7 16.2 102 103 A I H ><5S+ 0 0 22 -4,-2.5 3,-1.5 4,-0.2 -2,-0.2 0.927 111.5 51.4 -69.2 -45.2 26.1 9.3 19.0 103 104 A E H 3<5S+ 0 0 152 -4,-2.8 -2,-0.2 1,-0.3 -1,-0.2 0.873 108.6 52.1 -58.9 -39.1 23.6 11.7 20.6 104 105 A R T 3<5S- 0 0 120 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.514 116.0-119.1 -76.7 -3.8 22.0 12.3 17.2 105 106 A G T < 5S+ 0 0 58 -3,-1.5 -3,-0.2 2,-0.3 -2,-0.1 0.520 84.2 115.9 79.5 4.7 21.7 8.5 16.8 106 107 A E S