==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 25-FEB-00 1EIJ . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN MTH1615; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER . AUTHOR D.CHRISTENDAT,V.BOOTH,M.GERNSTEIN,C.H.ARROWSMITH, . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6390.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 61.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 48.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 222 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 129.6 2.7 20.7 -18.2 2 2 A R + 0 0 211 1,-0.2 2,-3.4 2,-0.0 3,-0.3 0.112 360.0 61.3 61.0 177.0 2.4 17.5 -16.2 3 3 A Q S S+ 0 0 152 1,-0.3 -1,-0.2 2,-0.2 0, 0.0 -0.318 116.2 38.8 69.1 -64.9 5.2 16.2 -13.9 4 4 A Q S S+ 0 0 169 -2,-3.4 2,-0.7 -3,-0.1 -1,-0.3 0.846 88.7 102.7 -82.1 -37.1 5.0 19.4 -11.7 5 5 A L S S- 0 0 122 -3,-0.3 2,-1.0 1,-0.1 -2,-0.2 -0.286 110.8 -74.4 -52.0 96.3 1.2 19.6 -12.0 6 6 A E - 0 0 126 -2,-0.7 -1,-0.1 1,-0.2 0, 0.0 -0.202 61.5-162.3 48.5 -88.5 0.3 18.3 -8.5 7 7 A M - 0 0 70 -2,-1.0 2,-1.5 1,-0.2 4,-0.5 0.972 7.6-149.8 75.1 81.7 1.0 14.6 -9.3 8 8 A Q S S+ 0 0 129 1,-0.2 -1,-0.2 2,-0.1 -2,-0.0 -0.639 74.7 66.2 -85.5 86.6 -0.7 12.5 -6.6 9 9 A K S >> S+ 0 0 110 -2,-1.5 4,-1.4 8,-0.0 3,-1.0 0.176 86.2 53.8-161.3 -61.9 1.7 9.5 -6.4 10 10 A K H 3> S+ 0 0 141 -3,-0.3 4,-1.5 1,-0.3 5,-0.2 0.841 99.9 68.2 -58.6 -33.0 5.2 10.2 -5.1 11 11 A Q H 34 S+ 0 0 118 -4,-0.5 4,-0.4 1,-0.2 3,-0.3 0.892 102.1 46.5 -53.7 -39.4 3.6 11.8 -2.1 12 12 A I H X>>S+ 0 0 16 -3,-1.0 4,-2.6 1,-0.2 3,-2.2 0.901 103.2 62.2 -67.7 -43.2 2.5 8.3 -1.2 13 13 A M H 3<5S+ 0 0 107 -4,-1.4 -1,-0.2 1,-0.3 -2,-0.2 0.785 100.1 55.9 -53.9 -29.7 5.9 6.8 -1.9 14 14 A M T 3<5S+ 0 0 169 -4,-1.5 -1,-0.3 -3,-0.3 -2,-0.2 0.657 114.0 39.0 -78.5 -17.1 7.2 9.0 0.9 15 15 A Q T <45S- 0 0 98 -3,-2.2 -2,-0.2 -4,-0.4 -3,-0.1 0.868 142.0 -46.7 -99.3 -46.9 4.7 7.5 3.4 16 16 A I T <5S+ 0 0 79 -4,-2.6 2,-0.5 39,-0.1 -3,-0.2 0.125 92.5 123.5 179.0 40.0 4.6 3.8 2.5 17 17 A L < - 0 0 13 -5,-0.9 40,-0.1 -4,-0.2 39,-0.1 -0.955 31.6-174.7-120.0 129.5 4.3 3.3 -1.2 18 18 A T >> - 0 0 46 -2,-0.5 3,-1.5 38,-0.2 4,-1.3 -0.937 37.5-119.7-120.4 144.5 6.7 1.3 -3.4 19 19 A P H 3> S+ 0 0 90 0, 0.0 4,-1.7 0, 0.0 5,-0.1 0.799 118.9 55.2 -48.1 -29.7 6.6 0.9 -7.2 20 20 A E H 3> S+ 0 0 136 2,-0.2 4,-3.0 1,-0.2 5,-0.2 0.832 98.2 61.6 -73.4 -34.5 6.2 -2.8 -6.5 21 21 A A H <> S+ 0 0 0 -3,-1.5 4,-2.1 2,-0.2 -1,-0.2 0.941 109.5 39.8 -57.9 -50.1 3.1 -2.1 -4.4 22 22 A R H X S+ 0 0 126 -4,-1.3 4,-1.9 1,-0.2 5,-0.2 0.946 120.0 44.7 -65.0 -49.3 1.2 -0.7 -7.3 23 23 A S H X S+ 0 0 82 -4,-1.7 4,-1.8 -5,-0.2 -2,-0.2 0.821 109.9 59.0 -64.2 -31.4 2.5 -3.2 -9.8 24 24 A R H X S+ 0 0 86 -4,-3.0 4,-3.4 2,-0.2 5,-0.3 0.967 104.5 47.5 -61.9 -54.9 1.9 -5.9 -7.2 25 25 A L H X S+ 0 0 15 -4,-2.1 4,-1.8 1,-0.3 -2,-0.2 0.943 114.9 45.8 -52.0 -52.7 -1.9 -5.2 -6.9 26 26 A A H < S+ 0 0 60 -4,-1.9 4,-0.3 1,-0.2 -1,-0.3 0.827 115.3 50.0 -58.8 -33.4 -2.2 -5.1 -10.7 27 27 A N H >< S+ 0 0 98 -4,-1.8 3,-0.9 -5,-0.2 -2,-0.2 0.875 110.5 47.1 -72.5 -42.2 -0.1 -8.3 -10.8 28 28 A L H >X S+ 0 0 5 -4,-3.4 3,-2.3 1,-0.2 4,-0.8 0.718 88.5 86.3 -72.5 -24.0 -2.2 -10.1 -8.2 29 29 A R T 3< S+ 0 0 160 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.797 93.0 47.0 -49.1 -29.3 -5.4 -9.2 -9.9 30 30 A L T <4 S+ 0 0 132 -3,-0.9 -1,-0.3 -4,-0.3 -2,-0.2 0.638 115.4 47.5 -87.4 -16.4 -4.9 -12.3 -12.1 31 31 A T T <4 S+ 0 0 73 -3,-2.3 -2,-0.2 1,-0.3 -3,-0.1 0.912 122.7 4.0 -86.8 -82.3 -4.1 -14.5 -9.1 32 32 A R X - 0 0 104 -4,-0.8 4,-1.0 1,-0.1 -1,-0.3 -0.930 50.6-160.3-112.6 128.5 -6.7 -14.0 -6.3 33 33 A P H > S+ 0 0 84 0, 0.0 4,-1.8 0, 0.0 5,-0.1 0.665 90.6 65.7 -72.9 -19.1 -9.7 -11.7 -6.7 34 34 A D H > S+ 0 0 93 2,-0.2 4,-2.0 1,-0.2 5,-0.4 0.935 96.7 51.6 -69.5 -48.5 -10.1 -11.5 -2.9 35 35 A F H > S+ 0 0 0 1,-0.2 4,-2.4 2,-0.2 5,-0.4 0.943 113.5 44.0 -53.4 -54.0 -6.8 -9.7 -2.3 36 36 A V H X S+ 0 0 11 -4,-1.0 4,-3.5 3,-0.2 5,-0.2 0.908 111.1 53.6 -60.5 -47.0 -7.6 -6.9 -4.8 37 37 A E H X S+ 0 0 119 -4,-1.8 4,-1.7 2,-0.2 -2,-0.2 0.958 119.5 31.0 -57.3 -54.3 -11.3 -6.4 -3.7 38 38 A Q H X S+ 0 0 102 -4,-2.0 4,-1.7 2,-0.2 5,-0.3 0.966 123.9 46.7 -70.0 -51.8 -10.6 -5.9 -0.0 39 39 A I H X S+ 0 0 0 -4,-2.4 4,-4.2 -5,-0.4 5,-0.3 0.912 107.4 59.8 -56.6 -41.8 -7.2 -4.2 -0.5 40 40 A E H X S+ 0 0 73 -4,-3.5 4,-4.5 -5,-0.4 5,-0.5 0.932 102.3 52.3 -53.0 -50.4 -8.7 -2.1 -3.3 41 41 A L H X S+ 0 0 102 -4,-1.7 4,-1.6 1,-0.2 -1,-0.2 0.943 119.9 33.7 -50.8 -53.0 -11.2 -0.6 -0.8 42 42 A Q H X S+ 0 0 91 -4,-1.7 4,-1.6 2,-0.2 -1,-0.2 0.831 122.3 49.8 -72.3 -33.5 -8.4 0.3 1.6 43 43 A L H X S+ 0 0 12 -4,-4.2 4,-2.7 -5,-0.3 5,-0.4 0.940 111.1 45.9 -71.0 -51.0 -5.9 1.0 -1.2 44 44 A I H X S+ 0 0 73 -4,-4.5 4,-1.7 -5,-0.3 -2,-0.2 0.893 116.6 45.7 -60.7 -42.1 -8.1 3.3 -3.2 45 45 A Q H X S+ 0 0 126 -4,-1.6 4,-0.6 -5,-0.5 -1,-0.2 0.862 115.7 46.7 -70.1 -37.4 -9.2 5.3 -0.2 46 46 A L H < S+ 0 0 38 -4,-1.6 3,-0.3 -5,-0.2 7,-0.2 0.952 117.5 38.8 -70.7 -52.8 -5.7 5.6 1.2 47 47 A A H < S+ 0 0 21 -4,-2.7 -3,-0.2 1,-0.2 -2,-0.2 0.954 112.3 54.9 -64.7 -52.3 -3.9 6.6 -2.0 48 48 A Q H < S+ 0 0 148 -4,-1.7 -1,-0.2 -5,-0.4 -2,-0.2 0.748 94.7 94.3 -54.1 -23.2 -6.6 8.9 -3.3 49 49 A M < - 0 0 81 -4,-0.6 2,-0.1 -3,-0.3 -3,-0.0 -0.326 63.7-156.6 -70.3 153.4 -6.3 10.7 0.0 50 50 A G + 0 0 63 4,-0.1 4,-0.1 2,-0.0 -1,-0.1 -0.533 69.1 52.0-133.8 69.8 -4.0 13.7 0.4 51 51 A R S S- 0 0 224 2,-0.2 3,-0.0 -2,-0.1 -2,-0.0 0.133 121.9 -25.7-156.1 -76.0 -3.0 14.2 4.0 52 52 A V S S+ 0 0 94 -6,-0.1 2,-0.5 1,-0.0 -2,-0.0 0.037 102.9 99.9-146.0 27.6 -1.5 11.3 6.0 53 53 A R + 0 0 139 -7,-0.2 2,-0.3 -6,-0.1 -2,-0.2 -0.962 43.5 174.7-124.3 115.6 -2.9 8.2 4.2 54 54 A S - 0 0 3 -2,-0.5 -7,-0.2 -42,-0.1 3,-0.1 -0.900 38.3 -93.3-120.3 150.2 -0.8 6.3 1.7 55 55 A K - 0 0 11 -2,-0.3 -12,-0.1 -9,-0.1 -39,-0.1 -0.222 53.6 -93.9 -59.4 145.2 -1.4 3.0 -0.2 56 56 A I - 0 0 12 -17,-0.1 -38,-0.2 1,-0.1 -1,-0.1 -0.318 41.2-117.1 -64.2 142.4 -0.1 -0.1 1.5 57 57 A T > - 0 0 19 -40,-0.1 4,-4.2 1,-0.1 5,-0.3 -0.338 26.3-105.4 -77.4 160.8 3.4 -1.3 0.4 58 58 A D H > S+ 0 0 31 1,-0.2 4,-2.6 2,-0.2 5,-0.1 0.830 123.0 55.4 -54.1 -32.9 4.1 -4.6 -1.3 59 59 A E H > S+ 0 0 131 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.963 115.2 35.0 -65.3 -52.9 5.5 -5.8 2.0 60 60 A Q H > S+ 0 0 101 2,-0.2 4,-2.4 1,-0.2 -2,-0.2 0.877 116.3 57.0 -69.5 -36.7 2.3 -4.9 4.0 61 61 A L H X S+ 0 0 0 -4,-4.2 4,-2.3 2,-0.2 -2,-0.2 0.934 104.2 52.8 -58.0 -46.8 0.2 -5.9 1.0 62 62 A K H X S+ 0 0 95 -4,-2.6 4,-1.6 2,-0.3 3,-0.4 0.950 110.2 46.1 -54.1 -52.0 1.8 -9.4 1.1 63 63 A E H X S+ 0 0 90 -4,-1.8 4,-1.3 1,-0.3 -1,-0.3 0.869 111.5 54.0 -57.9 -34.2 0.9 -9.7 4.7 64 64 A L H X S+ 0 0 24 -4,-2.4 4,-4.2 2,-0.2 5,-0.3 0.842 99.6 62.3 -67.3 -32.7 -2.5 -8.4 3.6 65 65 A L H X S+ 0 0 25 -4,-2.3 4,-3.9 -3,-0.4 -2,-0.2 0.924 104.9 45.0 -58.1 -46.9 -2.5 -11.2 1.1 66 66 A K H < S+ 0 0 149 -4,-1.6 -1,-0.2 2,-0.2 -2,-0.2 0.837 115.4 50.8 -64.7 -31.2 -2.4 -13.8 3.9 67 67 A R H < S+ 0 0 192 -4,-1.3 -2,-0.2 -5,-0.2 -1,-0.2 0.965 119.8 32.5 -68.8 -53.1 -5.1 -11.7 5.5 68 68 A V H < S+ 0 0 19 -4,-4.2 2,-0.4 -5,-0.0 -2,-0.2 0.884 105.2 82.7 -72.5 -42.2 -7.4 -11.5 2.5 69 69 A A S < S- 0 0 23 -4,-3.9 3,-0.1 -5,-0.3 -37,-0.0 -0.519 80.8-132.6 -69.9 122.7 -6.5 -14.9 1.2 70 70 A G - 0 0 66 -2,-0.4 2,-0.2 1,-0.1 -1,-0.1 0.304 39.0 -65.5 -57.1-164.3 -8.5 -17.6 3.0 71 71 A K 0 0 206 1,-0.1 -1,-0.1 0, 0.0 -5,-0.0 -0.494 360.0 360.0 -88.5 159.9 -7.0 -20.8 4.4 72 72 A K 0 0 234 -2,-0.2 -1,-0.1 -3,-0.1 -2,-0.0 0.492 360.0 360.0-144.5 360.0 -5.4 -23.6 2.4