==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-APR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 05-APR-12 4EIC . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS SP.; . AUTHOR S.KRZYWDA,W.BIALEK,M.JASKOLSKI,A.SZCZEPANIAK . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5134.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 71.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 41 44.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 79 0, 0.0 2,-0.9 0, 0.0 78,-0.1 0.000 360.0 360.0 360.0-171.1 -5.0 -5.5 20.6 2 2 A D > - 0 0 86 73,-0.2 4,-2.3 1,-0.2 81,-0.2 -0.738 360.0-177.0 -93.1 99.9 -5.6 -8.6 18.3 3 3 A A H > S+ 0 0 21 -2,-0.9 4,-1.3 79,-0.2 -1,-0.2 0.877 83.1 54.8 -64.6 -39.7 -2.5 -9.3 16.2 4 4 A A H >> S+ 0 0 78 1,-0.2 4,-0.6 2,-0.2 3,-0.5 0.919 110.7 45.1 -63.6 -40.4 -4.1 -12.2 14.4 5 5 A A H >> S+ 0 0 33 1,-0.2 4,-1.2 2,-0.2 3,-1.0 0.892 107.9 61.2 -64.9 -34.5 -7.1 -10.0 13.3 6 6 A G H 3X S+ 0 0 0 -4,-2.3 4,-2.5 73,-0.3 -1,-0.2 0.796 88.7 69.4 -64.2 -26.7 -4.6 -7.3 12.4 7 7 A A H S+ 0 0 13 -4,-2.5 4,-2.7 1,-0.2 5,-1.4 0.932 108.0 50.5 -58.9 -47.6 -2.6 -5.4 6.9 11 11 A A H <5S+ 0 0 72 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.857 116.7 42.5 -59.8 -36.3 -3.3 -7.5 3.8 12 12 A A H <5S+ 0 0 78 -4,-1.8 -1,-0.2 -5,-0.1 -2,-0.2 0.665 132.1 15.7 -82.0 -22.0 -6.1 -5.2 2.9 13 13 A N H <5S+ 0 0 56 -4,-1.4 -3,-0.2 -3,-0.5 -2,-0.2 0.497 127.5 31.7-132.5 -11.5 -4.5 -1.8 3.6 14 14 A C T >X5S+ 0 0 23 -4,-2.7 4,-2.0 -5,-0.2 3,-0.6 0.559 87.3 83.2-134.4 -19.2 -0.7 -2.0 4.0 15 15 A A H 3>< S+ 0 0 24 -4,-2.0 3,-2.5 5,-0.2 4,-0.3 0.012 70.9 161.7-128.5 27.8 4.9 -2.6 3.1 19 19 A A G >< S+ 0 0 66 -4,-1.2 3,-1.5 1,-0.3 -4,-0.0 -0.205 77.7 11.6 -51.9 137.3 5.0 -6.1 1.5 20 20 A G G 3 S- 0 0 43 1,-0.3 -1,-0.3 2,-0.1 3,-0.1 0.548 129.8 -72.3 73.2 6.8 7.4 -8.3 3.6 21 21 A G G < S+ 0 0 0 -3,-2.5 10,-3.1 1,-0.2 11,-0.3 0.594 108.4 117.4 80.1 9.0 7.6 -5.8 6.3 22 22 A N < - 0 0 74 -3,-1.5 2,-0.3 -4,-0.3 -1,-0.2 -0.021 67.1-116.6 -93.1-162.5 9.7 -3.6 4.1 23 23 A N - 0 0 25 4,-0.2 -5,-0.2 7,-0.1 6,-0.1 -0.864 17.3-170.9-146.7 101.8 9.0 -0.1 2.7 24 24 A A S S+ 0 0 81 -7,-2.8 -6,-0.1 -2,-0.3 -1,-0.1 0.790 89.5 41.5 -64.6 -25.6 8.7 0.3 -1.0 25 25 A V S S+ 0 0 93 -8,-0.4 -1,-0.2 1,-0.3 -7,-0.1 0.850 131.2 18.3 -89.1 -48.6 8.6 4.1 -0.8 26 26 A M S > S- 0 0 68 3,-0.1 3,-1.8 1,-0.1 -1,-0.3 -0.804 74.5-165.0-130.8 85.7 11.3 4.9 1.8 27 27 A P T 3 S+ 0 0 96 0, 0.0 3,-0.2 0, 0.0 -4,-0.2 0.735 81.5 56.7 -59.7 -24.7 13.4 1.7 2.0 28 28 A T T 3 S+ 0 0 86 1,-0.2 2,-1.8 -6,-0.1 11,-0.1 0.800 93.4 70.9 -67.5 -33.6 15.2 2.5 5.3 29 29 A K S < S+ 0 0 81 -3,-1.8 -1,-0.2 -6,-0.1 -3,-0.1 -0.403 72.2 157.2 -93.5 66.3 12.0 2.9 7.2 30 30 A T - 0 0 24 -2,-1.8 -8,-0.2 -3,-0.2 9,-0.1 -0.132 55.2-111.4 -81.2 179.3 10.9 -0.7 7.4 31 31 A L S S+ 0 0 18 -10,-3.1 2,-0.2 -13,-0.1 -9,-0.1 0.206 77.3 119.8 -97.6 13.0 8.6 -2.5 9.8 32 32 A K S > S- 0 0 63 -11,-0.3 4,-2.7 1,-0.1 5,-0.2 -0.481 77.7-109.5 -78.6 154.4 11.4 -4.5 11.3 33 33 A A H > S+ 0 0 34 55,-0.4 4,-1.9 1,-0.2 5,-0.1 0.832 114.8 47.7 -55.1 -45.2 12.2 -4.1 15.0 34 34 A D H > S+ 0 0 120 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.912 113.7 46.3 -66.9 -43.8 15.5 -2.3 14.6 35 35 A A H > S+ 0 0 6 1,-0.2 4,-2.6 2,-0.2 5,-0.4 0.922 110.0 54.4 -63.9 -44.4 14.2 0.2 12.1 36 36 A L H X S+ 0 0 12 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.920 108.1 48.9 -57.2 -46.0 11.0 0.9 14.1 37 37 A K H < S+ 0 0 92 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.796 116.7 44.0 -67.5 -23.4 13.1 1.8 17.2 38 38 A T H < S+ 0 0 87 -4,-1.2 -2,-0.2 -3,-0.4 -1,-0.2 0.853 130.4 15.7 -82.8 -37.4 15.3 4.1 15.1 39 39 A Y H < S+ 0 0 101 -4,-2.6 2,-0.6 -9,-0.1 -3,-0.2 0.608 88.4 103.3-121.0 -18.8 12.6 5.9 13.0 40 40 A L S X S- 0 0 14 -4,-2.3 4,-3.0 -5,-0.4 5,-0.3 -0.634 73.7-115.3 -82.8 122.4 9.0 5.6 14.3 41 41 A A T 4 S+ 0 0 49 -2,-0.6 2,-1.9 1,-0.2 16,-0.1 -0.096 93.0 6.7 -51.2 140.2 7.9 8.8 16.0 42 42 A G T >>S+ 0 0 6 1,-0.2 6,-1.2 5,-0.0 5,-1.1 -0.383 125.1 63.0 84.5 -58.1 7.1 8.4 19.7 43 43 A Y T >45S+ 0 0 38 -2,-1.9 3,-1.1 1,-0.2 -2,-0.2 0.925 99.0 55.1 -60.9 -42.4 8.4 4.9 19.9 44 44 A K T 3<5S+ 0 0 108 -4,-3.0 -1,-0.2 1,-0.3 -3,-0.1 0.776 110.6 45.9 -64.9 -24.7 11.9 6.0 19.0 45 45 A D T 345S- 0 0 104 -3,-0.4 -1,-0.3 -5,-0.3 -2,-0.2 0.470 111.6-117.2 -98.1 -4.6 11.9 8.5 21.9 46 46 A G T <<5S+ 0 0 56 -3,-1.1 -3,-0.2 -4,-0.7 -2,-0.1 0.374 88.5 106.5 88.4 -5.7 10.5 6.1 24.5 47 47 A S S - 0 0 75 -2,-0.3 4,-2.6 1,-0.1 5,-0.2 -0.310 37.5-106.0 -68.8 165.2 4.8 1.9 23.2 50 50 A L H > S+ 0 0 5 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.953 120.5 48.9 -59.5 -49.3 5.4 0.3 19.8 51 51 A E H > S+ 0 0 71 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.923 113.1 47.0 -59.5 -47.1 1.6 -0.5 19.4 52 52 A E H > S+ 0 0 97 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.915 112.3 49.3 -62.6 -43.7 0.5 3.0 20.4 53 53 A A H X S+ 0 0 2 -4,-2.6 4,-2.3 2,-0.2 -2,-0.2 0.896 112.6 47.6 -64.1 -39.4 3.0 4.6 18.0 54 54 A V H X S+ 0 0 11 -4,-2.6 4,-2.8 -5,-0.2 5,-0.3 0.933 111.8 50.4 -63.8 -45.8 1.9 2.4 15.1 55 55 A A H X S+ 0 0 16 -4,-2.6 4,-2.4 -5,-0.2 -2,-0.2 0.903 110.7 49.6 -58.9 -41.7 -1.7 3.1 15.9 56 56 A Y H X S+ 0 0 120 -4,-2.6 4,-2.6 2,-0.2 5,-0.2 0.933 112.7 46.0 -62.9 -46.8 -1.0 6.9 15.9 57 57 A Q H X S+ 0 0 42 -4,-2.3 4,-2.1 1,-0.2 -2,-0.2 0.873 113.3 49.2 -68.7 -36.5 0.8 6.8 12.6 58 58 A V H < S+ 0 0 12 -4,-2.8 10,-2.5 2,-0.2 11,-0.4 0.920 115.6 44.4 -62.8 -45.6 -1.8 4.6 10.9 59 59 A T H < S+ 0 0 43 -4,-2.4 10,-2.2 -5,-0.3 -2,-0.2 0.923 128.9 24.1 -62.4 -45.8 -4.6 7.0 12.2 60 60 A N H < S- 0 0 82 -4,-2.6 7,-0.3 7,-0.2 -2,-0.2 0.511 98.4-133.4-106.4 -8.1 -2.8 10.2 11.3 61 61 A G < - 0 0 14 -4,-2.1 2,-0.2 5,-0.4 -1,-0.2 -0.007 10.4-132.7 73.7 173.2 -0.4 9.4 8.6 62 62 A Q B > -A 65 0A 103 3,-2.1 3,-2.7 1,-0.1 -1,-0.1 -0.779 55.3 -44.1-164.3 120.2 3.3 10.5 8.3 63 63 A G T 3 S- 0 0 72 1,-0.3 -1,-0.1 -2,-0.2 0, 0.0 -0.379 130.3 -6.6 60.7-130.1 5.1 12.1 5.4 64 64 A A T 3 S+ 0 0 76 -2,-0.1 -1,-0.3 -3,-0.1 -3,-0.0 0.562 114.0 99.6 -76.5 -13.0 4.2 10.2 2.3 65 65 A M B < S-A 62 0A 48 -3,-2.7 -3,-2.1 1,-0.1 0, 0.0 -0.665 75.3-127.4 -77.9 124.7 2.2 7.6 4.3 66 66 A P - 0 0 69 0, 0.0 -5,-0.4 0, 0.0 2,-0.3 -0.260 18.7-110.1 -67.4 157.3 -1.5 8.3 4.1 67 67 A A - 0 0 42 -7,-0.3 -8,-0.2 -6,-0.1 -7,-0.2 -0.610 20.4-166.1 -81.3 146.5 -3.8 8.7 7.2 68 68 A F >> + 0 0 18 -10,-2.5 3,-2.5 -2,-0.3 4,-1.5 0.446 48.0 119.9-112.7 -6.2 -6.4 5.9 7.8 69 69 A G B 34 S+b 72 0B 39 -10,-2.2 4,-0.1 -11,-0.4 -2,-0.1 -0.394 86.1 21.0 -58.9 138.1 -8.5 7.7 10.4 70 70 A G T 34 S+ 0 0 89 2,-0.5 -1,-0.3 1,-0.1 3,-0.1 0.426 121.4 65.1 83.7 -11.6 -12.0 7.9 8.9 71 71 A R T <4 S+ 0 0 153 -3,-2.5 2,-0.3 1,-0.3 -2,-0.2 0.548 103.6 39.6-112.6 -30.1 -11.1 5.0 6.4 72 72 A L B < S-b 69 0B 25 -4,-1.5 -2,-0.5 -13,-0.1 -1,-0.3 -0.955 87.0-107.4-126.6 148.3 -10.7 2.2 9.0 73 73 A S > - 0 0 60 -2,-0.3 4,-2.3 1,-0.1 5,-0.2 -0.296 32.6-110.5 -66.4 160.4 -12.6 1.3 12.1 74 74 A D H > S+ 0 0 146 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.908 120.1 49.6 -55.8 -44.8 -11.1 1.9 15.6 75 75 A A H > S+ 0 0 58 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.890 108.5 52.5 -66.1 -39.5 -10.7 -1.8 16.1 76 76 A D H > S+ 0 0 62 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.900 111.1 46.9 -62.5 -41.9 -9.0 -2.4 12.7 77 77 A I H X S+ 0 0 8 -4,-2.3 4,-2.0 2,-0.2 -2,-0.2 0.942 114.1 47.2 -63.9 -46.1 -6.5 0.3 13.5 78 78 A A H X S+ 0 0 39 -4,-2.5 4,-2.0 -5,-0.2 -2,-0.2 0.920 114.5 47.9 -60.1 -45.0 -5.8 -1.1 17.0 79 79 A N H X S+ 0 0 29 -4,-2.8 4,-2.2 2,-0.2 -73,-0.3 0.900 109.0 50.8 -68.9 -39.9 -5.5 -4.6 15.6 80 80 A V H X S+ 0 0 2 -4,-2.6 4,-2.6 1,-0.2 -1,-0.2 0.890 108.9 53.9 -65.4 -34.1 -3.2 -3.8 12.7 81 81 A A H X S+ 0 0 2 -4,-2.0 4,-2.4 1,-0.2 -1,-0.2 0.908 107.9 49.8 -62.4 -42.4 -0.9 -2.0 15.2 82 82 A A H X S+ 0 0 1 -4,-2.0 4,-2.6 2,-0.2 -79,-0.2 0.883 109.1 52.9 -60.8 -38.2 -0.9 -5.2 17.3 83 83 A Y H X S+ 0 0 39 -4,-2.2 4,-2.9 -81,-0.2 5,-0.3 0.940 109.6 47.5 -62.3 -49.5 0.1 -7.1 14.1 84 84 A I H X S+ 0 0 11 -4,-2.6 4,-2.6 1,-0.2 5,-0.3 0.941 113.5 48.3 -56.9 -46.5 3.0 -4.8 13.4 85 85 A A H X S+ 0 0 1 -4,-2.4 4,-2.9 1,-0.2 5,-0.3 0.919 114.2 45.7 -61.7 -43.5 4.2 -5.0 17.0 86 86 A D H X S+ 0 0 47 -4,-2.6 4,-1.8 2,-0.2 6,-0.2 0.926 113.8 48.4 -65.8 -44.4 3.9 -8.9 17.1 87 87 A Q H <>S+ 0 0 22 -4,-2.9 5,-2.7 -5,-0.2 6,-0.5 0.920 118.5 40.2 -60.3 -45.6 5.6 -9.3 13.7 88 88 A A H ><5S+ 0 0 1 -4,-2.6 3,-1.2 -5,-0.3 -55,-0.4 0.947 115.6 47.6 -71.5 -50.5 8.5 -6.9 14.7 89 89 A E H 3<5S+ 0 0 116 -4,-2.9 -1,-0.2 -5,-0.3 -2,-0.2 0.818 119.4 40.2 -63.4 -30.8 9.0 -8.0 18.3 90 90 A N T 3<5S- 0 0 87 -4,-1.8 -1,-0.3 -5,-0.3 -2,-0.2 0.297 107.9-122.1-101.7 8.0 9.0 -11.7 17.4 91 91 A N T < 5 + 0 0 128 -3,-1.2 -3,-0.2 -4,-0.2 -4,-0.1 0.919 62.1 144.1 55.1 50.7 11.0 -11.3 14.1 92 92 A K < 0 0 108 -5,-2.7 -4,-0.1 -6,-0.2 -1,-0.1 0.350 360.0 360.0-104.2 3.7 8.3 -12.9 12.0 93 93 A W 0 0 91 -6,-0.5 -1,-0.2 -5,-0.1 -71,-0.1 0.825 360.0 360.0 -65.2 360.0 8.6 -10.8 8.8