==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-APR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 05-APR-12 4EIE . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS SP.; . AUTHOR S.KRZYWDA,W.BIALEK,P.ZATWARNICKI,M.JASKOLSKI,A.SZCZEPANIAK . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5263.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 69.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 11.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 45.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 4 A D > 0 0 160 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 114.8 23.0 6.3 20.9 2 5 A Q H > + 0 0 87 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.898 360.0 54.0 -59.4 -43.7 20.8 4.2 18.5 3 6 A G H > S+ 0 0 10 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.924 110.2 46.5 -60.9 -42.4 18.6 7.2 17.7 4 7 A A H > S+ 0 0 10 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.882 112.5 50.6 -62.8 -43.2 21.6 9.3 16.7 5 8 A Q H X S+ 0 0 111 -4,-2.2 4,-2.0 2,-0.2 -2,-0.2 0.918 111.0 47.8 -61.9 -43.1 23.0 6.5 14.6 6 9 A I H X S+ 0 0 9 -4,-2.6 4,-2.2 2,-0.2 5,-0.4 0.923 111.4 51.7 -62.4 -43.3 19.7 6.0 12.8 7 10 A F H X>S+ 0 0 7 -4,-2.3 4,-2.6 -5,-0.2 5,-2.1 0.940 109.7 49.2 -58.6 -47.3 19.5 9.8 12.2 8 11 A E H <5S+ 0 0 108 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.871 116.9 42.1 -59.4 -36.7 23.0 9.9 10.8 9 12 A A H <5S+ 0 0 73 -4,-2.0 -1,-0.2 -5,-0.1 -2,-0.2 0.739 132.0 15.8 -84.9 -25.2 22.3 7.0 8.5 10 13 A H H <5S+ 0 0 80 -4,-2.2 -3,-0.2 -5,-0.1 -2,-0.2 0.551 130.2 30.4-129.0 -12.3 18.8 7.9 7.3 11 14 A C T >X5S+ 0 0 25 -4,-2.6 4,-2.0 -5,-0.4 3,-1.5 0.646 92.9 79.4-125.2 -28.9 17.9 11.5 8.0 12 15 A A H 3>< + 0 0 21 -4,-2.0 3,-2.3 5,-0.2 -3,-0.2 -0.025 68.2 160.8-123.7 27.0 18.4 17.4 8.1 16 19 A L G >< S+ 0 0 111 -4,-1.0 3,-2.0 1,-0.3 -4,-0.0 -0.249 80.2 2.2 -51.3 135.0 22.1 17.6 9.1 17 20 A N G 3 S- 0 0 114 1,-0.3 -1,-0.3 2,-0.1 3,-0.1 0.724 134.8 -61.2 57.3 26.1 22.3 19.6 12.3 18 21 A G G < S+ 0 0 0 -3,-2.3 10,-2.6 1,-0.2 11,-0.4 0.578 105.5 126.2 80.2 7.2 18.6 20.0 12.5 19 22 A G < - 0 0 17 -3,-2.0 2,-0.2 8,-0.2 9,-0.2 -0.013 54.5-138.8 -79.3-169.1 18.2 21.8 9.2 20 23 A N - 0 0 27 7,-0.1 -5,-0.2 4,-0.1 6,-0.2 -0.699 15.0-178.0-152.0 98.8 16.1 21.1 6.1 21 24 A I S S+ 0 0 139 -7,-2.2 3,-0.2 -2,-0.2 -6,-0.1 0.600 84.3 47.8 -74.0 -13.5 18.0 21.7 2.9 22 25 A V S S+ 0 0 90 -8,-0.3 2,-0.6 1,-0.3 -1,-0.2 0.882 122.5 24.2 -89.0 -55.4 14.9 20.7 0.9 23 26 A R S > S- 0 0 158 1,-0.1 3,-2.3 3,-0.1 -1,-0.3 -0.903 70.2-162.1-121.9 96.6 12.1 22.7 2.5 24 27 A R T 3 S+ 0 0 189 -2,-0.6 3,-0.4 1,-0.3 -1,-0.1 0.803 86.0 52.7 -46.2 -45.9 13.6 25.7 4.3 25 28 A G T 3 S+ 0 0 37 1,-0.2 -1,-0.3 7,-0.0 2,-0.0 0.388 100.3 62.9 -82.5 8.9 10.6 26.3 6.4 26 29 A K < + 0 0 67 -3,-2.3 -1,-0.2 -6,-0.2 -3,-0.1 -0.398 69.7 143.8-131.9 59.2 10.3 22.9 7.9 27 30 A N - 0 0 24 -3,-0.4 -8,-0.2 -7,-0.1 -7,-0.1 -0.122 58.5-111.4 -92.4-176.4 13.4 22.2 9.8 28 31 A L S S+ 0 0 18 -10,-2.6 -9,-0.2 -9,-0.2 54,-0.2 0.221 77.2 112.3-101.9 14.2 14.0 20.3 13.1 29 32 A K S > S- 0 0 91 -11,-0.4 4,-2.3 52,-0.1 5,-0.3 -0.330 83.6 -94.4 -86.7 170.8 14.9 23.2 15.2 30 33 A K H > S+ 0 0 96 1,-0.2 4,-2.6 48,-0.2 5,-0.3 0.867 115.6 50.1 -58.7 -46.5 12.8 24.5 18.0 31 34 A R H > S+ 0 0 161 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.946 116.3 37.3 -59.3 -58.9 10.8 27.2 16.2 32 35 A A H > S+ 0 0 1 1,-0.2 4,-2.1 2,-0.2 6,-0.2 0.899 117.1 52.4 -64.9 -38.9 9.6 25.2 13.2 33 36 A M H X>S+ 0 0 10 -4,-2.3 5,-2.3 1,-0.2 4,-0.5 0.925 113.0 44.4 -62.9 -44.9 9.0 22.1 15.2 34 37 A A H ><5S+ 0 0 57 -4,-2.6 3,-1.1 -5,-0.3 -2,-0.2 0.925 111.7 52.6 -63.6 -44.9 6.9 23.9 17.8 35 38 A K H 3<5S+ 0 0 162 -4,-2.6 -1,-0.2 -5,-0.3 -2,-0.2 0.896 115.1 42.0 -59.3 -39.2 4.9 25.8 15.2 36 39 A N H 3<5S- 0 0 54 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.445 114.9-114.6 -90.4 0.0 4.1 22.5 13.5 37 40 A G T <<5 + 0 0 37 -3,-1.1 2,-2.0 -4,-0.5 3,-0.2 0.630 65.9 143.8 79.7 15.0 3.4 20.6 16.7 38 41 A Y < + 0 0 48 -5,-2.3 -1,-0.2 -6,-0.2 -3,-0.1 -0.482 30.4 120.1 -86.3 73.4 6.3 18.1 16.5 39 42 A T + 0 0 73 -2,-2.0 2,-0.3 -5,-0.1 -1,-0.2 0.134 59.5 57.7-128.8 17.3 6.7 18.3 20.2 40 43 A S S > S- 0 0 49 -3,-0.2 4,-1.8 1,-0.1 5,-0.2 -0.968 81.2-119.1-144.5 156.8 6.1 14.6 21.1 41 44 A V H > S+ 0 0 31 -2,-0.3 4,-3.1 1,-0.2 5,-0.2 0.920 115.2 53.7 -60.3 -43.1 7.6 11.3 20.2 42 45 A E H > S+ 0 0 141 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.892 105.7 51.1 -64.2 -40.7 4.3 10.2 18.7 43 46 A A H > S+ 0 0 26 2,-0.2 4,-1.5 1,-0.2 -1,-0.2 0.920 115.5 42.8 -61.4 -45.0 3.9 13.3 16.4 44 47 A I H X S+ 0 0 8 -4,-1.8 4,-2.7 2,-0.2 5,-0.2 0.936 112.7 51.8 -66.1 -44.8 7.4 12.8 15.1 45 48 A A H X S+ 0 0 4 -4,-3.1 4,-2.6 1,-0.2 5,-0.2 0.878 106.1 55.3 -61.4 -38.0 7.0 9.0 14.7 46 49 A N H X S+ 0 0 95 -4,-2.5 4,-2.3 -5,-0.2 -1,-0.2 0.923 111.0 44.7 -61.8 -43.5 3.8 9.4 12.8 47 50 A L H X S+ 0 0 39 -4,-1.5 4,-2.8 2,-0.2 -2,-0.2 0.926 113.6 49.1 -64.7 -47.5 5.5 11.6 10.2 48 51 A V H < S+ 0 0 16 -4,-2.7 10,-2.3 1,-0.2 11,-0.3 0.914 114.2 46.9 -59.8 -41.6 8.6 9.4 9.9 49 52 A T H < S+ 0 0 59 -4,-2.6 10,-2.2 9,-0.2 -1,-0.2 0.939 124.7 28.2 -64.5 -49.5 6.4 6.4 9.5 50 53 A Q H < S- 0 0 159 -4,-2.3 7,-0.3 -5,-0.2 -2,-0.2 0.687 95.2-144.4 -89.8 -21.9 4.0 7.8 6.9 51 54 A G < - 0 0 14 -4,-2.8 2,-0.3 5,-0.3 5,-0.2 -0.032 7.6-134.5 73.3 172.9 6.1 10.4 5.1 52 55 A K B > -A 55 0A 127 3,-1.9 3,-2.7 1,-0.1 -1,-0.1 -0.849 51.7 -39.2-166.2 127.3 4.8 13.8 3.8 53 56 A G T 3 S- 0 0 79 1,-0.3 -1,-0.1 -2,-0.3 0, 0.0 -0.274 130.2 -4.3 60.8-128.1 5.2 15.6 0.6 54 57 A N T 3 S+ 0 0 158 -3,-0.1 2,-0.5 2,-0.1 -1,-0.3 0.474 116.0 93.7 -80.4 -3.3 8.8 15.3 -0.6 55 58 A M B < S-A 52 0A 53 -3,-2.7 -3,-1.9 1,-0.1 0, 0.0 -0.819 78.4-125.6 -87.5 128.9 9.9 13.4 2.6 56 59 A S - 0 0 63 -2,-0.5 2,-0.3 -5,-0.2 -5,-0.3 -0.217 19.7-106.6 -64.7 157.3 9.7 9.6 2.1 57 60 A A - 0 0 45 -7,-0.3 -8,-0.2 -6,-0.2 -7,-0.2 -0.646 26.1-169.6 -73.8 139.9 7.8 7.3 4.3 58 61 A Y >> + 0 0 45 -10,-2.3 4,-2.4 -2,-0.3 3,-2.1 0.390 59.4 101.7-111.6 2.9 10.0 5.2 6.5 59 62 A G T 34 S+ 0 0 31 -10,-2.2 -10,-0.1 -11,-0.3 -1,-0.1 0.703 91.3 38.0 -65.4 -21.0 7.4 2.7 7.8 60 63 A D T 34 S+ 0 0 167 -11,-0.2 -1,-0.3 -3,-0.1 3,-0.1 0.222 121.5 47.6-106.1 13.8 8.6 0.0 5.3 61 64 A K T <4 S+ 0 0 131 -3,-2.1 2,-0.3 1,-0.3 -2,-0.2 0.635 112.3 36.9-118.9 -34.5 12.3 1.0 5.8 62 65 A L S < S- 0 0 9 -4,-2.4 -1,-0.3 -13,-0.1 -4,-0.0 -0.958 84.9-113.3-121.3 145.9 12.9 1.3 9.5 63 66 A S > - 0 0 54 -2,-0.3 4,-2.7 1,-0.1 5,-0.2 -0.255 31.9-105.1 -70.9 166.1 11.4 -0.9 12.2 64 67 A S H > S+ 0 0 101 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.896 123.8 50.6 -56.3 -41.9 8.9 0.5 14.7 65 68 A E H > S+ 0 0 104 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.902 110.0 48.7 -66.0 -41.0 11.7 0.4 17.3 66 69 A E H > S+ 0 0 57 2,-0.2 4,-2.7 1,-0.2 5,-0.3 0.897 110.5 51.8 -64.2 -42.3 14.1 2.3 15.1 67 70 A I H X S+ 0 0 6 -4,-2.7 4,-2.1 1,-0.2 -2,-0.2 0.927 110.5 48.6 -61.6 -42.1 11.4 4.9 14.3 68 71 A Q H X S+ 0 0 99 -4,-2.4 4,-2.3 -5,-0.2 -2,-0.2 0.923 112.2 49.1 -62.0 -44.7 10.8 5.3 18.0 69 72 A A H X S+ 0 0 22 -4,-2.3 4,-2.1 1,-0.2 -2,-0.2 0.924 113.5 43.6 -64.8 -45.4 14.4 5.7 18.7 70 73 A V H X S+ 0 0 2 -4,-2.7 4,-2.6 2,-0.2 -1,-0.2 0.862 112.3 55.4 -68.0 -32.6 15.1 8.3 16.0 71 74 A S H X S+ 0 0 0 -4,-2.1 4,-2.5 -5,-0.3 -2,-0.2 0.904 107.5 48.2 -66.3 -42.2 11.9 10.2 17.0 72 75 A Q H X S+ 0 0 76 -4,-2.3 4,-2.7 2,-0.2 5,-0.2 0.919 111.1 51.8 -61.6 -43.8 13.1 10.5 20.6 73 76 A Y H X S+ 0 0 43 -4,-2.1 4,-2.7 1,-0.2 5,-0.2 0.953 111.7 46.2 -58.3 -48.5 16.5 11.7 19.3 74 77 A V H X S+ 0 0 11 -4,-2.6 4,-2.7 1,-0.2 5,-0.2 0.908 111.5 52.0 -61.9 -41.2 14.8 14.3 17.2 75 78 A L H X S+ 0 0 26 -4,-2.5 4,-1.9 2,-0.2 -2,-0.2 0.964 112.5 44.4 -58.3 -51.3 12.5 15.4 20.0 76 79 A Q H X S+ 0 0 99 -4,-2.7 4,-0.9 1,-0.2 -2,-0.2 0.929 115.9 46.9 -63.2 -42.8 15.3 15.9 22.4 77 80 A Q H ><>S+ 0 0 50 -4,-2.7 5,-2.7 -5,-0.2 3,-0.6 0.916 113.0 48.7 -65.1 -43.2 17.6 17.7 19.9 78 81 A S H ><5S+ 0 0 1 -4,-2.7 3,-0.9 1,-0.2 -1,-0.2 0.854 109.2 52.0 -65.0 -34.3 14.8 20.0 18.7 79 82 A Q H 3<5S+ 0 0 88 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.676 116.0 41.6 -79.1 -20.7 13.7 21.0 22.2 80 83 A T T <<5S- 0 0 92 -4,-0.9 -1,-0.3 -3,-0.6 -2,-0.2 0.043 117.2-109.5-118.7 15.6 17.3 21.9 23.1 81 84 A D T < 5 0 0 98 -3,-0.9 -3,-0.2 -53,-0.1 -4,-0.1 0.654 360.0 360.0 78.5 23.3 18.1 23.7 19.7 82 85 A W < 0 0 65 -5,-2.7 -64,-0.1 -54,-0.2 -52,-0.0 -0.008 360.0 360.0 34.4 360.0 20.6 21.2 18.1