==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-APR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 05-APR-12 4EIF . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS SP.; . AUTHOR S.KRZYWDA,W.BIALEK,P.ZATWARNICKI,M.JASKOLSKI,A.SZCZEPANIAK . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5305.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 67.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 45.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 4 A D > 0 0 166 0, 0.0 4,-2.1 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -47.4 5.4 21.7 21.2 2 5 A Q H > + 0 0 78 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.889 360.0 57.6 -60.6 -39.2 7.2 23.8 18.7 3 6 A G H > S+ 0 0 7 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.908 106.8 47.4 -60.3 -42.5 9.5 20.9 17.8 4 7 A A H > S+ 0 0 17 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.888 112.1 50.5 -62.9 -40.3 6.5 18.7 16.9 5 8 A Q H X S+ 0 0 99 -4,-2.1 4,-1.9 2,-0.2 -2,-0.2 0.918 110.8 48.0 -64.8 -45.2 5.0 21.6 14.8 6 9 A I H X S+ 0 0 9 -4,-2.6 4,-1.9 2,-0.2 5,-0.3 0.925 111.2 51.9 -59.4 -43.8 8.3 22.1 12.9 7 10 A F H X>S+ 0 0 7 -4,-2.3 4,-2.7 -5,-0.2 5,-2.1 0.932 109.3 49.3 -59.9 -46.5 8.5 18.3 12.3 8 11 A E H <5S+ 0 0 110 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.873 117.0 42.1 -58.7 -38.8 5.0 18.2 10.9 9 12 A A H <5S+ 0 0 72 -4,-1.9 -1,-0.2 -5,-0.1 -2,-0.2 0.701 132.2 15.8 -83.1 -23.8 5.8 21.2 8.5 10 13 A H H <5S+ 0 0 82 -4,-1.9 -3,-0.2 -3,-0.2 -2,-0.2 0.547 129.9 30.4-128.9 -15.7 9.3 20.2 7.4 11 14 A C T >X5S+ 0 0 26 -4,-2.7 4,-2.1 -5,-0.3 3,-1.4 0.604 92.7 79.7-124.4 -28.9 10.1 16.5 8.1 12 15 A A H 3>< + 0 0 23 -4,-2.1 3,-2.2 5,-0.2 -3,-0.2 -0.041 68.5 161.5-121.8 27.3 9.6 10.7 8.2 16 19 A L G >< S+ 0 0 112 -4,-1.0 3,-2.0 1,-0.3 -4,-0.0 -0.238 79.7 2.0 -51.0 133.8 5.9 10.4 9.2 17 20 A N G 3 S- 0 0 117 1,-0.3 -1,-0.3 2,-0.1 3,-0.1 0.745 134.6 -61.9 56.1 28.8 5.6 8.4 12.4 18 21 A G G < S+ 0 0 0 -3,-2.2 10,-2.6 1,-0.2 11,-0.4 0.544 105.7 125.3 77.8 9.7 9.4 8.1 12.6 19 22 A G < - 0 0 20 -3,-2.0 2,-0.2 8,-0.2 9,-0.2 0.019 55.6-135.9 -81.1-166.9 9.8 6.2 9.3 20 23 A N - 0 0 31 7,-0.1 -5,-0.2 4,-0.1 6,-0.2 -0.732 15.4-177.3-153.0 98.7 11.9 6.9 6.2 21 24 A I S S+ 0 0 137 -7,-2.2 3,-0.2 -2,-0.2 -6,-0.1 0.607 84.2 44.9 -73.0 -13.6 10.0 6.3 3.0 22 25 A V S S+ 0 0 94 -8,-0.3 2,-0.7 1,-0.3 -1,-0.1 0.920 119.3 29.8 -95.6 -55.3 13.1 7.2 0.9 23 26 A R S > S- 0 0 153 1,-0.1 3,-2.1 3,-0.1 -1,-0.3 -0.916 70.3-158.1-114.3 104.5 16.0 5.3 2.5 24 27 A R T 3 S+ 0 0 190 -2,-0.7 3,-0.4 1,-0.3 -1,-0.1 0.798 87.4 48.7 -50.2 -43.9 14.7 2.1 4.1 25 28 A G T 3 S+ 0 0 40 1,-0.2 -1,-0.3 7,-0.0 0, 0.0 0.314 99.8 68.4 -86.9 8.0 17.6 1.7 6.6 26 29 A K < + 0 0 63 -3,-2.1 -1,-0.2 -6,-0.2 -3,-0.1 -0.350 65.2 143.2-127.0 54.2 17.7 5.3 8.0 27 30 A N - 0 0 29 -3,-0.4 -8,-0.2 -7,-0.1 -7,-0.1 -0.152 58.6-113.1 -82.3 179.9 14.6 5.9 10.0 28 31 A L S S+ 0 0 20 -10,-2.6 -9,-0.2 -9,-0.2 53,-0.1 0.204 77.7 110.7-102.3 15.5 14.0 7.8 13.2 29 32 A K S > S- 0 0 91 -11,-0.4 4,-2.3 52,-0.1 5,-0.3 -0.341 83.8 -94.3 -88.3 170.5 13.2 4.8 15.4 30 33 A K H > S+ 0 0 115 48,-0.3 4,-2.7 1,-0.2 5,-0.3 0.863 114.9 51.1 -57.8 -47.6 15.4 3.5 18.2 31 34 A R H > S+ 0 0 158 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.949 116.4 36.7 -58.9 -58.0 17.3 0.8 16.4 32 35 A A H > S+ 0 0 1 2,-0.2 4,-2.2 1,-0.2 6,-0.2 0.904 117.4 52.4 -64.8 -40.5 18.6 2.8 13.4 33 36 A M H X>S+ 0 0 11 -4,-2.3 5,-2.4 1,-0.2 4,-0.5 0.932 113.0 44.1 -61.4 -44.2 19.1 6.0 15.4 34 37 A A H ><5S+ 0 0 56 -4,-2.7 3,-1.0 -5,-0.3 -2,-0.2 0.924 111.3 54.0 -66.4 -43.3 21.2 4.1 18.0 35 38 A K H 3<5S+ 0 0 165 -4,-2.5 -1,-0.2 -5,-0.3 -2,-0.2 0.915 114.6 40.9 -56.8 -42.7 23.2 2.3 15.4 36 39 A N H 3<5S- 0 0 70 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.442 116.0-112.2 -89.7 1.2 24.1 5.5 13.7 37 40 A G T <<5 + 0 0 38 -3,-1.0 2,-2.0 -4,-0.5 3,-0.2 0.634 66.4 144.5 80.2 15.7 24.7 7.5 16.9 38 41 A Y < + 0 0 45 -5,-2.4 -1,-0.2 -6,-0.2 -3,-0.1 -0.481 31.3 118.9 -85.0 70.3 21.8 9.9 16.7 39 42 A T + 0 0 74 -2,-2.0 2,-0.3 -5,-0.1 -1,-0.2 0.134 60.6 56.4-126.9 14.8 21.4 9.8 20.5 40 43 A S S > S- 0 0 50 -3,-0.2 4,-1.8 1,-0.1 5,-0.2 -0.968 81.8-118.1-142.0 156.5 22.1 13.4 21.3 41 44 A V H > S+ 0 0 30 -2,-0.3 4,-3.1 1,-0.2 5,-0.2 0.931 115.8 52.6 -57.6 -43.8 20.5 16.7 20.3 42 45 A E H > S+ 0 0 137 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.895 105.9 51.8 -64.3 -41.0 23.8 17.8 18.8 43 46 A A H > S+ 0 0 26 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.920 115.9 41.8 -60.2 -45.6 24.2 14.7 16.7 44 47 A I H X S+ 0 0 8 -4,-1.8 4,-2.6 2,-0.2 5,-0.2 0.940 113.5 51.6 -66.8 -46.4 20.8 15.2 15.2 45 48 A A H X S+ 0 0 4 -4,-3.1 4,-2.5 1,-0.2 -2,-0.2 0.882 107.4 53.8 -61.8 -38.7 21.1 19.0 14.8 46 49 A N H X S+ 0 0 97 -4,-2.6 4,-1.9 -5,-0.2 -1,-0.2 0.905 111.2 45.4 -61.5 -43.6 24.4 18.6 13.0 47 50 A Q H X S+ 0 0 44 -4,-1.4 4,-2.4 -5,-0.2 -2,-0.2 0.913 114.0 48.1 -67.4 -41.3 22.8 16.2 10.4 48 51 A V H < S+ 0 0 19 -4,-2.6 10,-2.2 1,-0.2 11,-0.3 0.890 111.6 51.4 -66.3 -40.3 19.7 18.4 10.0 49 52 A T H < S+ 0 0 58 -4,-2.5 10,-2.2 9,-0.2 -1,-0.2 0.927 123.4 26.4 -62.5 -49.2 21.8 21.5 9.5 50 53 A Q H < S- 0 0 161 -4,-1.9 7,-0.3 -5,-0.2 -2,-0.2 0.657 98.6-141.6 -93.5 -16.9 24.1 20.1 6.8 51 54 A G < - 0 0 14 -4,-2.4 2,-0.3 5,-0.3 5,-0.2 -0.072 9.1-132.1 73.7 173.5 21.9 17.4 5.2 52 55 A K B > -A 55 0A 114 3,-1.6 3,-2.5 1,-0.1 -1,-0.1 -0.861 53.5 -33.3-166.0 135.7 23.2 14.1 4.0 53 56 A G T 3 S- 0 0 76 1,-0.3 -1,-0.1 -2,-0.3 0, 0.0 -0.309 130.4 -9.5 52.2-126.6 22.8 12.0 0.9 54 57 A N T 3 S+ 0 0 161 -3,-0.1 2,-0.5 2,-0.1 -1,-0.3 0.430 115.3 98.7 -81.9 -2.8 19.3 12.7 -0.6 55 58 A M B < S-A 52 0A 50 -3,-2.5 -3,-1.6 1,-0.1 0, 0.0 -0.788 76.8-123.7 -84.0 129.2 18.2 14.6 2.5 56 59 A S - 0 0 45 -2,-0.5 2,-0.3 -5,-0.2 -5,-0.3 -0.216 20.8-106.1 -65.5 158.5 18.4 18.3 2.1 57 60 A A - 0 0 47 -7,-0.3 -8,-0.2 -6,-0.2 -7,-0.2 -0.662 25.7-168.3 -76.3 139.4 20.4 20.7 4.3 58 61 A Y >> + 0 0 44 -10,-2.2 4,-2.5 -2,-0.3 3,-2.1 0.453 61.4 99.7-108.4 -1.9 18.1 22.8 6.6 59 62 A G T 34 S+ 0 0 32 -10,-2.2 -1,-0.1 -11,-0.3 -10,-0.1 0.685 91.2 38.9 -62.6 -22.2 20.7 25.3 7.8 60 63 A D T 34 S+ 0 0 170 -11,-0.2 -1,-0.3 -3,-0.2 3,-0.1 0.250 121.6 45.9-102.5 5.6 19.5 27.9 5.3 61 64 A K T <4 S+ 0 0 121 -3,-2.1 2,-0.3 1,-0.3 -2,-0.2 0.669 112.3 37.2-118.0 -39.2 15.8 27.1 5.8 62 65 A L S < S- 0 0 9 -4,-2.5 -1,-0.3 -13,-0.1 -4,-0.0 -0.942 84.8-112.3-117.5 145.5 15.2 26.8 9.5 63 66 A S > - 0 0 55 -2,-0.3 4,-2.6 1,-0.1 5,-0.2 -0.251 31.3-106.1 -70.6 164.9 16.8 28.9 12.2 64 67 A S H > S+ 0 0 105 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.899 123.2 51.3 -57.2 -40.1 19.3 27.5 14.7 65 68 A E H > S+ 0 0 105 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.900 110.0 48.4 -65.9 -40.8 16.6 27.7 17.4 66 69 A E H > S+ 0 0 59 2,-0.2 4,-2.6 1,-0.2 5,-0.3 0.892 110.6 51.5 -64.1 -41.5 14.1 25.8 15.2 67 70 A I H X S+ 0 0 6 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.920 110.5 49.2 -63.0 -41.3 16.7 23.1 14.4 68 71 A Q H X S+ 0 0 103 -4,-2.3 4,-2.3 -5,-0.2 -2,-0.2 0.928 111.9 49.0 -60.7 -44.9 17.4 22.7 18.1 69 72 A A H X S+ 0 0 22 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.935 113.9 43.5 -65.3 -46.7 13.7 22.3 18.9 70 73 A V H X S+ 0 0 2 -4,-2.6 4,-2.6 1,-0.2 -1,-0.2 0.872 112.0 55.2 -68.2 -31.9 13.0 19.7 16.1 71 74 A S H X S+ 0 0 0 -4,-2.2 4,-2.5 -5,-0.3 -2,-0.2 0.906 107.7 48.5 -67.4 -40.6 16.2 17.9 17.1 72 75 A Q H X S+ 0 0 79 -4,-2.3 4,-2.7 2,-0.2 5,-0.2 0.924 111.2 51.3 -63.2 -42.0 15.0 17.6 20.7 73 76 A Y H X S+ 0 0 50 -4,-2.1 4,-2.6 1,-0.2 5,-0.2 0.945 112.0 46.1 -58.6 -49.8 11.6 16.3 19.5 74 77 A V H X S+ 0 0 11 -4,-2.6 4,-2.8 2,-0.2 -1,-0.2 0.907 111.6 52.0 -62.4 -41.6 13.2 13.7 17.3 75 78 A L H X S+ 0 0 26 -4,-2.5 4,-1.9 2,-0.2 -2,-0.2 0.956 112.5 44.9 -57.9 -51.4 15.5 12.6 20.1 76 79 A Q H X S+ 0 0 99 -4,-2.7 4,-1.1 1,-0.2 -2,-0.2 0.917 115.5 46.8 -61.9 -43.7 12.7 12.2 22.6 77 80 A Q H <>S+ 0 0 49 -4,-2.6 5,-1.9 -5,-0.2 3,-0.3 0.920 113.4 48.6 -65.8 -40.7 10.4 10.3 20.0 78 81 A S H ><5S+ 0 0 1 -4,-2.8 3,-1.0 1,-0.2 -48,-0.3 0.850 110.1 50.5 -64.5 -38.6 13.3 8.0 18.9 79 82 A Q H 3<5S+ 0 0 96 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.686 118.3 39.5 -77.1 -25.1 14.3 7.1 22.5 80 83 A T T 3<5S- 0 0 91 -4,-1.1 -1,-0.3 -3,-0.3 -2,-0.2 -0.012 116.8-113.6-114.6 21.6 10.7 6.2 23.3 81 84 A D T < 5 0 0 94 -3,-1.0 -3,-0.2 -53,-0.1 -4,-0.1 0.368 360.0 360.0 72.1 10.8 9.9 4.6 19.9 82 85 A W < 0 0 69 -5,-1.9 -64,-0.1 -6,-0.2 -52,-0.0 -0.242 360.0 360.0 51.0 360.0 7.3 6.9 18.2