==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 14-MAR-07 2EJ4 . COMPND 2 MOLECULE: ZINC FINGER PROTEIN ZIC 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 95 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7320.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 45.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 17.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -8.8 -16.4 38.9 17.1 2 2 A S - 0 0 132 2,-0.0 2,-0.4 1,-0.0 0, 0.0 -0.476 360.0-160.9 -76.6 145.6 -17.2 36.6 14.2 3 3 A S + 0 0 125 -2,-0.2 2,-0.1 2,-0.1 -1,-0.0 -0.988 40.4 76.3-133.0 125.9 -20.9 35.5 13.8 4 4 A G - 0 0 71 -2,-0.4 2,-0.1 2,-0.0 -2,-0.0 -0.394 69.6 -95.4 144.5 137.7 -22.1 32.5 11.8 5 5 A S - 0 0 128 -2,-0.1 2,-0.2 1,-0.1 -2,-0.1 -0.467 38.8-134.3 -75.4 144.8 -22.3 28.7 12.0 6 6 A S - 0 0 92 -2,-0.1 -1,-0.1 2,-0.0 -2,-0.0 -0.497 19.4-175.9 -95.4 166.7 -19.6 26.6 10.3 7 7 A G - 0 0 69 -2,-0.2 3,-0.1 3,-0.0 -2,-0.0 -0.385 16.1-148.2-165.1 78.1 -20.0 23.6 8.1 8 8 A Q - 0 0 168 1,-0.1 2,-0.1 -2,-0.0 3,-0.1 -0.078 34.8 -97.6 -48.2 146.1 -16.8 21.7 7.0 9 9 A P - 0 0 115 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.385 49.5 -85.2 -69.7 144.5 -17.1 20.1 3.5 10 10 A I - 0 0 164 -3,-0.1 2,-0.3 1,-0.1 -3,-0.0 0.090 48.0-116.1 -42.6 160.2 -18.0 16.4 3.3 11 11 A K - 0 0 154 -3,-0.1 2,-0.2 1,-0.0 -1,-0.1 -0.749 20.0-127.1-105.8 153.6 -15.1 14.0 3.5 12 12 A Q - 0 0 107 -2,-0.3 2,-0.6 24,-0.3 -1,-0.0 -0.524 13.4-127.7 -95.1 164.3 -13.8 11.5 0.9 13 13 A E - 0 0 138 -2,-0.2 23,-0.2 1,-0.2 20,-0.0 -0.855 19.4-177.3-117.1 96.0 -13.2 7.8 1.2 14 14 A L - 0 0 41 21,-1.2 -1,-0.2 -2,-0.6 22,-0.1 0.897 27.9-173.0 -55.8 -43.0 -9.8 6.8 0.1 15 15 A S - 0 0 31 20,-0.3 2,-0.5 1,-0.1 19,-0.2 0.340 27.5-104.4 61.4 158.4 -10.6 3.1 0.7 16 16 A C - 0 0 2 17,-0.3 2,-2.2 2,-0.1 16,-1.2 -0.840 25.7-171.0-122.8 94.0 -8.1 0.3 0.5 17 17 A K + 0 0 76 -2,-0.5 2,-1.1 14,-0.2 46,-1.0 -0.305 32.7 147.5 -79.1 55.6 -8.4 -1.8 -2.7 18 18 A W - 0 0 5 -2,-2.2 2,-1.4 44,-0.2 13,-0.5 -0.752 30.9-166.1 -96.9 91.2 -5.9 -4.3 -1.4 19 19 A I - 0 0 35 -2,-1.1 43,-0.2 11,-0.3 11,-0.2 -0.622 14.9-154.2 -80.0 92.3 -7.0 -7.7 -2.8 20 20 A D - 0 0 59 -2,-1.4 2,-0.4 9,-0.4 42,-0.1 0.128 13.9-112.6 -54.7 178.6 -5.0 -10.2 -0.7 21 21 A E S S- 0 0 117 1,-0.1 3,-0.1 7,-0.0 -1,-0.1 -0.981 87.2 -4.7-125.5 130.3 -4.2 -13.6 -2.1 22 22 A A S S+ 0 0 72 -2,-0.4 -1,-0.1 1,-0.2 -2,-0.0 0.465 87.1 176.3 71.3 -0.5 -5.5 -16.9 -0.8 23 23 A Q - 0 0 30 1,-0.1 -1,-0.2 6,-0.1 6,-0.0 0.058 47.8-103.6 -35.7 142.1 -7.2 -14.9 1.9 24 24 A L S S+ 0 0 193 -3,-0.1 2,-0.1 4,-0.0 -1,-0.1 0.854 109.4 60.3 -38.2 -46.6 -9.4 -17.0 4.2 25 25 A S S S- 0 0 67 4,-0.1 4,-0.2 2,-0.0 -3,-0.0 -0.470 89.5 -98.8 -85.3 158.1 -12.4 -15.6 2.3 26 26 A R S S+ 0 0 179 2,-0.1 2,-0.2 -2,-0.1 -2,-0.0 -0.981 81.2 28.5-154.0 161.8 -13.0 -16.1 -1.4 27 27 A P S S- 0 0 107 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.571 104.5 -84.9 -69.7 165.0 -13.0 -15.4 -4.2 28 28 A K - 0 0 125 -2,-0.2 2,-0.2 -9,-0.1 -2,-0.1 -0.072 66.2-175.6 -38.5 93.0 -10.0 -13.0 -3.7 29 29 A K - 0 0 95 -4,-0.2 -9,-0.4 -2,-0.2 -6,-0.1 -0.503 31.1 -82.2 -95.2 166.5 -12.0 -10.0 -2.6 30 30 A S - 0 0 46 -11,-0.2 -11,-0.3 -2,-0.2 -13,-0.1 -0.360 39.5-113.7 -67.9 145.4 -10.8 -6.5 -1.8 31 31 A C - 0 0 33 -13,-0.5 -14,-0.2 -15,-0.1 -1,-0.1 0.891 49.7-143.1 -43.7 -49.1 -9.3 -5.8 1.6 32 32 A D + 0 0 113 -16,-1.2 2,-0.3 1,-0.1 -15,-0.1 0.678 37.9 135.3 82.9 117.0 -12.2 -3.5 2.4 33 33 A R - 0 0 102 2,-0.0 -17,-0.3 -20,-0.0 2,-0.3 -0.976 39.4-133.9-175.7 173.4 -11.7 -0.4 4.4 34 34 A T + 0 0 91 -2,-0.3 2,-0.3 -19,-0.2 -21,-0.1 -0.881 24.0 171.2-151.4 114.4 -12.6 3.3 4.7 35 35 A F - 0 0 12 -2,-0.3 -21,-1.2 1,-0.1 -20,-0.3 -0.785 23.2-164.3-120.4 164.6 -10.1 6.2 5.5 36 36 A S S S+ 0 0 50 -2,-0.3 2,-0.4 -23,-0.2 -24,-0.3 0.648 74.7 61.6-116.6 -31.7 -10.4 10.0 5.5 37 37 A T S > S- 0 0 73 1,-0.1 4,-1.3 -24,-0.0 3,-0.4 -0.815 73.3-137.1-103.3 140.3 -6.7 11.0 5.6 38 38 A M H > S+ 0 0 65 -2,-0.4 4,-1.7 1,-0.2 5,-0.2 0.769 105.2 62.4 -62.7 -25.5 -4.2 10.1 2.9 39 39 A H H > S+ 0 0 131 2,-0.2 4,-2.2 1,-0.1 -1,-0.2 0.904 99.5 53.2 -66.8 -42.5 -1.7 9.3 5.7 40 40 A E H > S+ 0 0 94 -3,-0.4 4,-2.2 2,-0.2 3,-0.3 0.981 107.8 48.0 -56.3 -63.5 -3.9 6.5 7.0 41 41 A L H >X S+ 0 0 3 -4,-1.3 4,-1.9 1,-0.3 3,-0.9 0.921 115.6 44.5 -42.5 -59.8 -4.3 4.6 3.7 42 42 A V H 3< S+ 0 0 6 -4,-1.7 4,-0.4 1,-0.3 -1,-0.3 0.851 117.8 46.0 -55.8 -36.0 -0.5 4.8 3.0 43 43 A T H 3X S+ 0 0 56 -4,-2.2 4,-1.3 -3,-0.3 5,-0.5 0.653 110.7 57.0 -81.4 -16.6 0.1 3.8 6.7 44 44 A H H S+ 0 0 12 -4,-2.2 4,-1.8 -3,-0.9 5,-1.0 0.983 106.2 42.1 -76.7 -67.2 -2.6 1.0 6.4 45 45 A V H <>S+ 0 0 0 -4,-1.9 5,-3.1 3,-0.2 6,-0.2 0.660 110.8 67.1 -55.3 -14.1 -1.3 -1.1 3.5 46 46 A T H 4>S+ 0 0 40 -5,-0.4 5,-0.5 -4,-0.4 -1,-0.2 0.990 125.1 0.3 -70.9 -64.0 2.1 -0.5 5.2 47 47 A M H <5S+ 0 0 112 -4,-1.3 5,-0.2 3,-0.3 -2,-0.2 0.863 131.5 58.6 -93.1 -46.3 1.6 -2.5 8.4 48 48 A E T <5S+ 0 0 100 -4,-1.8 -3,-0.2 -5,-0.5 -4,-0.1 0.868 134.0 2.1 -51.4 -39.8 -1.9 -3.8 7.9 49 49 A H T - 0 0 35 -5,-0.2 3,-1.0 2,-0.1 0, 0.0 0.124 68.7 -69.3 -77.6-163.1 6.7 -4.8 9.5 53 53 A P T 3 S+ 0 0 113 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.474 127.0 70.9 -69.8 -0.7 10.1 -6.6 9.2 54 54 A E T 3 S+ 0 0 183 2,-0.1 2,-0.3 0, 0.0 -2,-0.1 -0.031 77.9 109.5-105.4 28.8 8.4 -9.6 10.9 55 55 A Q < - 0 0 77 -3,-1.0 2,-0.6 -4,-0.1 3,-0.1 -0.711 64.6-131.0-104.9 156.7 6.3 -10.4 7.9 56 56 A N S S- 0 0 141 -2,-0.3 -2,-0.1 1,-0.3 -5,-0.0 -0.908 77.6 -5.6-112.0 108.8 6.6 -13.4 5.5 57 57 A N - 0 0 113 -2,-0.6 2,-0.6 1,-0.1 -1,-0.3 0.756 67.0-144.0 77.8 113.1 6.5 -12.6 1.8 58 58 A H + 0 0 59 14,-0.1 14,-0.6 -3,-0.1 2,-0.3 -0.922 28.8 162.3-114.2 110.7 5.8 -9.0 0.7 59 59 A V - 0 0 18 -2,-0.6 2,-1.0 12,-0.2 12,-0.1 -0.949 41.7-117.0-128.5 148.4 3.8 -8.5 -2.4 60 60 A C - 0 0 1 9,-0.4 2,-0.5 -2,-0.3 9,-0.5 -0.717 35.1-171.5 -86.7 100.6 1.8 -5.5 -3.8 61 61 A Y + 0 0 42 -2,-1.0 2,-0.3 7,-0.1 -41,-0.1 -0.820 20.8 138.0 -97.4 126.7 -1.8 -6.6 -3.9 62 62 A W > - 0 0 46 -2,-0.5 3,-0.6 -43,-0.2 -44,-0.2 -0.985 58.2-118.6-160.2 161.5 -4.3 -4.3 -5.7 63 63 A E T 3 S+ 0 0 118 -46,-1.0 2,-0.2 -2,-0.3 -1,-0.1 0.882 114.8 25.2 -72.2 -39.8 -7.2 -4.3 -8.1 64 64 A E T 3 S+ 0 0 153 -47,-0.2 -1,-0.3 -3,-0.1 -3,-0.0 -0.555 88.0 143.8-125.6 66.8 -5.4 -2.2 -10.7 65 65 A C < - 0 0 7 -3,-0.6 3,-0.1 -2,-0.2 -3,-0.1 -0.841 46.3-144.4-109.3 144.0 -1.7 -2.9 -10.2 66 66 A P S S+ 0 0 78 0, 0.0 4,-0.1 0, 0.0 -1,-0.1 0.899 104.0 49.4 -69.8 -42.7 1.0 -3.2 -12.8 67 67 A R S > S- 0 0 97 2,-0.1 3,-3.1 3,-0.1 4,-0.0 0.657 85.0-163.0 -71.5 -15.2 3.0 -5.9 -11.0 68 68 A E T 3 S- 0 0 168 1,-0.3 3,-0.1 -3,-0.1 -7,-0.1 0.774 83.9 -25.3 34.7 32.9 -0.3 -7.8 -10.6 69 69 A G T 3 S+ 0 0 22 -9,-0.5 -9,-0.4 1,-0.3 -1,-0.3 -0.259 97.0 138.3 131.5 -48.3 1.7 -9.7 -7.9 70 70 A K < - 0 0 162 -3,-3.1 -1,-0.3 -4,-0.1 -10,-0.3 -0.024 42.5-154.7 -34.7 107.8 5.3 -9.3 -9.0 71 71 A S - 0 0 63 1,-0.1 2,-0.2 -12,-0.1 -12,-0.2 0.259 9.2-113.4 -71.9-157.5 7.0 -8.7 -5.7 72 72 A F - 0 0 47 -14,-0.6 -1,-0.1 2,-0.0 -14,-0.1 -0.668 15.7-112.6-131.7-173.5 10.3 -6.8 -5.2 73 73 A K S S+ 0 0 192 -2,-0.2 2,-0.3 1,-0.1 3,-0.1 0.532 98.9 40.7-100.7 -11.0 13.8 -7.5 -4.0 74 74 A A S > S- 0 0 25 1,-0.1 4,-0.7 -16,-0.1 -1,-0.1 -0.985 75.8-127.3-139.4 149.1 13.5 -5.3 -0.9 75 75 A K H >> S+ 0 0 65 -2,-0.3 3,-1.8 1,-0.2 4,-0.9 0.968 112.0 44.5 -56.6 -58.3 10.8 -4.8 1.8 76 76 A Y H 3> S+ 0 0 138 1,-0.3 4,-2.2 2,-0.2 5,-0.2 0.928 100.2 68.9 -52.6 -50.2 10.8 -1.0 1.4 77 77 A K H 3> S+ 0 0 73 1,-0.2 4,-1.3 2,-0.2 -1,-0.3 0.760 99.6 55.3 -40.9 -27.6 10.8 -1.2 -2.4 78 78 A L H XX S+ 0 0 1 -3,-1.8 4,-2.2 -4,-0.7 3,-0.9 0.993 104.9 44.6 -71.4 -67.1 7.3 -2.6 -1.8 79 79 A V H 3X S+ 0 0 24 -4,-0.9 4,-1.3 1,-0.3 -2,-0.2 0.773 110.2 62.1 -48.8 -27.3 5.7 0.2 0.2 80 80 A N H 3X S+ 0 0 47 -4,-2.2 4,-0.6 1,-0.2 -1,-0.3 0.938 106.9 39.9 -66.0 -48.3 7.4 2.5 -2.4 81 81 A H H XX S+ 0 0 18 -4,-1.3 3,-0.6 -3,-0.9 4,-0.5 0.819 106.8 66.5 -70.4 -31.5 5.4 1.1 -5.3 82 82 A I H >X S+ 0 0 3 -4,-2.2 3,-2.4 1,-0.2 4,-2.2 0.887 88.8 66.5 -56.6 -41.2 2.3 0.9 -3.2 83 83 A R H 3X>S+ 0 0 43 -4,-1.3 4,-2.5 1,-0.3 5,-0.7 0.902 89.8 63.7 -46.6 -49.0 2.2 4.7 -3.0 84 84 A V H <<5S+ 0 0 102 -4,-0.6 -1,-0.3 -3,-0.6 -2,-0.2 0.784 111.9 38.7 -47.9 -28.8 1.5 4.9 -6.8 85 85 A H H <<5S+ 0 0 29 -3,-2.4 -2,-0.2 -4,-0.5 -1,-0.2 0.914 108.7 57.0 -87.9 -53.0 -1.7 3.0 -5.9 86 86 A T H <5S- 0 0 7 -4,-2.2 -2,-0.2 1,-0.1 -3,-0.2 0.796 106.1-126.8 -49.2 -30.2 -2.7 4.7 -2.7 87 87 A G T <5 + 0 0 51 -4,-2.5 -3,-0.1 -5,-0.3 -1,-0.1 0.492 68.7 121.9 93.4 4.5 -2.6 8.0 -4.6 88 88 A E < - 0 0 59 -5,-0.7 -1,-0.1 1,-0.2 -49,-0.0 0.177 68.8 -63.3 -80.1-157.2 -0.3 9.7 -2.2 89 89 A K - 0 0 173 1,-0.2 -1,-0.2 -3,-0.1 -2,-0.1 -0.084 60.2 -84.8 -81.4-174.2 3.2 11.1 -2.9 90 90 A S - 0 0 94 1,-0.1 -1,-0.2 -7,-0.1 -9,-0.1 -0.171 48.5 -89.5 -84.5-178.2 6.3 9.3 -4.1 91 91 A G - 0 0 13 -11,-0.1 3,-0.4 1,-0.1 2,-0.1 -0.717 39.5-105.8 -98.8 147.3 8.9 7.5 -2.0 92 92 A P S S- 0 0 111 0, 0.0 -1,-0.1 0, 0.0 -12,-0.0 -0.418 94.0 -3.8 -69.7 140.1 12.0 9.0 -0.4 93 93 A S S S- 0 0 125 1,-0.2 2,-0.4 -2,-0.1 0, 0.0 0.921 84.3-149.5 39.2 78.4 15.4 8.2 -2.0 94 94 A S 0 0 79 -3,-0.4 -1,-0.2 1,-0.1 -4,-0.0 -0.628 360.0 360.0 -80.2 128.4 14.1 5.8 -4.7 95 95 A G 0 0 86 -2,-0.4 -1,-0.1 0, 0.0 -2,-0.0 -0.169 360.0 360.0-101.1 360.0 16.6 3.1 -5.6