==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-MAR-07 2EJ7 . COMPND 2 MOLECULE: HCG3 GENE; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHINISHI,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6485.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 62.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 39.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 123 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 140.7 11.8 -6.6 -15.7 2 2 A S - 0 0 142 2,-0.2 0, 0.0 1,-0.0 0, 0.0 0.924 360.0 -23.0 -66.2 -45.8 14.3 -3.9 -16.4 3 3 A S S S- 0 0 127 1,-0.2 2,-0.4 0, 0.0 -1,-0.0 0.565 90.4-120.4-132.7 -48.1 12.3 -1.3 -14.5 4 4 A G - 0 0 64 2,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.918 48.2 -41.9 142.9-114.6 8.7 -2.3 -14.4 5 5 A S - 0 0 85 -2,-0.4 2,-0.6 3,-0.1 0, 0.0 -0.980 35.9-140.0-157.8 143.7 5.7 -0.4 -15.8 6 6 A S S S+ 0 0 135 -2,-0.3 2,-0.2 3,-0.0 3,-0.1 -0.925 73.5 40.7-111.6 117.8 4.5 3.2 -15.9 7 7 A G S S+ 0 0 67 -2,-0.6 -1,-0.0 1,-0.5 -2,-0.0 -0.666 94.8 41.0 157.2 -96.3 0.8 3.8 -15.4 8 8 A M S S- 0 0 151 -2,-0.2 -1,-0.5 1,-0.0 2,-0.4 -0.121 71.0-122.8 -76.9 178.7 -1.4 2.0 -12.9 9 9 A V - 0 0 62 -3,-0.1 2,-1.0 46,-0.0 3,-0.1 -0.804 22.5-173.2-130.6 91.6 -0.4 1.1 -9.3 10 10 A D >> - 0 0 42 -2,-0.4 4,-2.5 1,-0.2 3,-1.1 -0.732 14.3-153.6 -88.1 100.8 -0.6 -2.6 -8.5 11 11 A Y H >> S+ 0 0 37 -2,-1.0 4,-2.9 1,-0.3 3,-1.1 0.880 95.7 52.8 -34.3 -65.2 0.1 -3.0 -4.8 12 12 A Y H 34>S+ 0 0 8 1,-0.3 5,-3.3 2,-0.2 -1,-0.3 0.866 116.8 39.7 -41.0 -46.3 1.4 -6.5 -5.2 13 13 A E H <45S+ 0 0 112 -3,-1.1 3,-0.4 3,-0.2 -1,-0.3 0.727 113.5 56.3 -77.6 -22.7 3.8 -5.1 -7.8 14 14 A V H <<5S+ 0 0 7 -4,-2.5 -2,-0.2 -3,-1.1 -1,-0.2 0.793 110.1 43.5 -78.2 -29.8 4.4 -2.0 -5.8 15 15 A L T <5S- 0 0 0 -4,-2.9 -1,-0.2 -5,-0.3 -2,-0.2 0.289 116.7-113.3 -97.1 8.3 5.5 -4.0 -2.7 16 16 A D T 5S+ 0 0 121 -3,-0.4 -3,-0.2 -5,-0.3 -4,-0.1 0.942 77.0 120.6 59.7 50.1 7.6 -6.3 -4.9 17 17 A V < - 0 0 16 -5,-3.3 -1,-0.2 -6,-0.2 -2,-0.2 -0.989 63.6-104.7-144.5 151.7 5.4 -9.3 -4.2 18 18 A P > - 0 0 79 0, 0.0 3,-1.5 0, 0.0 -3,-0.0 -0.184 37.1-105.9 -69.8 165.1 3.3 -11.8 -6.2 19 19 A R T 3 S+ 0 0 174 1,-0.3 -7,-0.1 -6,-0.0 54,-0.0 0.818 126.2 44.1 -61.5 -31.0 -0.5 -11.8 -6.3 20 20 A Q T 3 S+ 0 0 155 2,-0.0 -1,-0.3 -8,-0.0 0, 0.0 0.345 84.5 145.4 -94.7 4.7 -0.5 -14.8 -4.0 21 21 A A < - 0 0 4 -3,-1.5 2,-0.1 1,-0.1 5,-0.1 -0.150 51.8-119.6 -45.9 129.0 2.2 -13.3 -1.8 22 22 A S >> - 0 0 82 1,-0.1 4,-2.0 4,-0.0 3,-1.2 -0.447 23.5-107.0 -75.2 147.0 1.6 -14.3 1.8 23 23 A S H >> S+ 0 0 60 1,-0.3 4,-2.7 2,-0.2 3,-1.0 0.876 124.1 49.2 -35.5 -58.6 1.0 -11.6 4.4 24 24 A E H 3> S+ 0 0 112 1,-0.3 4,-2.5 2,-0.2 -1,-0.3 0.867 111.4 50.2 -52.5 -39.2 4.4 -12.1 5.9 25 25 A A H <> S+ 0 0 43 -3,-1.2 4,-0.6 1,-0.2 -1,-0.3 0.756 111.2 49.8 -71.5 -24.8 5.8 -11.9 2.3 26 26 A I H X S+ 0 0 34 -4,-0.9 4,-3.0 2,-0.2 3,-1.7 0.887 102.9 61.9 -93.7 -53.1 7.0 -3.7 2.0 31 31 A R H 3X S+ 0 0 158 -4,-3.1 4,-0.8 1,-0.3 -3,-0.1 0.783 105.8 53.4 -44.3 -29.7 8.6 -2.7 5.3 32 32 A K H 34 S+ 0 0 123 -5,-0.3 -1,-0.3 -4,-0.2 4,-0.3 0.836 114.2 39.4 -76.2 -34.4 11.8 -2.6 3.2 33 33 A L H X> S+ 0 0 16 -3,-1.7 4,-3.2 -4,-0.3 3,-1.0 0.919 108.6 58.7 -80.4 -48.0 10.2 -0.3 0.6 34 34 A A H 3< S+ 0 0 7 -4,-3.0 -1,-0.2 1,-0.3 -3,-0.2 0.810 116.7 37.3 -51.1 -31.6 8.3 2.0 3.0 35 35 A L T 3< S+ 0 0 103 -4,-0.8 -1,-0.3 -5,-0.4 -2,-0.2 0.559 115.0 56.0 -96.6 -12.1 11.7 2.7 4.6 36 36 A K T <4 S+ 0 0 115 -3,-1.0 -2,-0.2 -4,-0.3 -3,-0.2 0.807 117.5 31.9 -87.7 -34.0 13.5 2.7 1.3 37 37 A W S < S+ 0 0 43 -4,-3.2 16,-0.7 12,-0.1 -1,-0.1 0.140 90.6 134.5-108.2 17.0 11.4 5.4 -0.4 38 38 A H >> - 0 0 47 -5,-0.2 4,-2.4 1,-0.1 3,-0.7 -0.419 57.7-137.6 -70.0 140.6 10.7 7.2 2.9 39 39 A P T 34 S+ 0 0 23 0, 0.0 -1,-0.1 0, 0.0 11,-0.1 0.720 105.6 55.0 -69.8 -21.7 11.0 11.1 2.8 40 40 A D T 34 S+ 0 0 139 1,-0.1 -5,-0.1 9,-0.1 -2,-0.0 0.616 116.2 36.9 -86.0 -14.6 12.8 11.0 6.2 41 41 A K T <4 S+ 0 0 121 -3,-0.7 -1,-0.1 1,-0.2 5,-0.1 0.681 113.9 56.3-106.3 -28.2 15.4 8.5 4.8 42 42 A N < + 0 0 32 -4,-2.4 7,-0.2 1,-0.2 -1,-0.2 -0.734 57.3 156.5-110.0 82.9 15.7 9.9 1.3 43 43 A P S > S+ 0 0 71 0, 0.0 3,-1.0 0, 0.0 4,-0.3 0.942 77.8 44.1 -69.7 -50.3 16.6 13.6 1.7 44 44 A E T 3 S+ 0 0 148 1,-0.3 3,-0.3 2,-0.1 -2,-0.1 0.873 128.1 31.3 -63.6 -38.0 18.3 14.0 -1.7 45 45 A N T >> S+ 0 0 47 1,-0.2 4,-3.1 2,-0.1 3,-1.1 0.082 81.3 125.0-106.9 21.1 15.4 12.1 -3.4 46 46 A K H <> S+ 0 0 89 -3,-1.0 4,-2.9 1,-0.3 5,-0.2 0.856 71.3 59.4 -47.0 -39.8 12.8 13.3 -0.9 47 47 A E H 34 S+ 0 0 143 -3,-0.3 4,-0.3 -4,-0.3 -1,-0.3 0.899 114.7 34.4 -57.7 -42.9 10.8 14.6 -3.9 48 48 A E H X> S+ 0 0 93 -3,-1.1 4,-3.0 2,-0.2 3,-1.7 0.942 118.1 50.4 -77.7 -51.7 10.7 11.1 -5.3 49 49 A A H 3X S+ 0 0 0 -4,-3.1 4,-3.1 1,-0.3 5,-0.3 0.865 103.1 62.2 -54.6 -38.4 10.5 9.1 -2.0 50 50 A E H 3< S+ 0 0 103 -4,-2.9 -1,-0.3 -5,-0.4 4,-0.2 0.765 114.1 35.2 -59.8 -24.9 7.6 11.4 -0.9 51 51 A R H <> S+ 0 0 203 -3,-1.7 4,-1.2 -4,-0.3 3,-0.3 0.838 116.9 50.3 -95.6 -43.5 5.7 10.1 -3.9 52 52 A R H X S+ 0 0 60 -4,-3.0 4,-2.5 1,-0.2 3,-0.2 0.880 108.4 54.3 -63.0 -39.1 6.9 6.5 -4.0 53 53 A F H X S+ 0 0 51 -4,-3.1 4,-2.5 -16,-0.7 5,-0.3 0.788 101.7 60.7 -65.8 -27.6 6.2 6.1 -0.2 54 54 A K H > S+ 0 0 152 -3,-0.3 4,-1.3 -5,-0.3 -1,-0.2 0.896 112.1 36.2 -66.7 -41.3 2.6 7.2 -1.0 55 55 A Q H X S+ 0 0 52 -4,-1.2 4,-2.0 -3,-0.2 -2,-0.2 0.857 117.4 52.4 -79.5 -37.8 2.0 4.3 -3.3 56 56 A V H X S+ 0 0 0 -4,-2.5 4,-2.3 2,-0.2 5,-0.3 0.934 110.6 47.1 -63.6 -48.0 4.0 1.8 -1.2 57 57 A A H X S+ 0 0 15 -4,-2.5 4,-2.7 1,-0.2 -1,-0.2 0.936 113.3 47.8 -59.7 -49.1 2.2 2.6 2.0 58 58 A E H X S+ 0 0 82 -4,-1.3 4,-1.0 -5,-0.3 -1,-0.2 0.858 110.0 55.3 -61.0 -36.2 -1.2 2.4 0.4 59 59 A A H >X S+ 0 0 0 -4,-2.0 4,-2.8 2,-0.2 3,-0.7 0.966 114.8 35.8 -61.6 -55.5 -0.2 -0.9 -1.2 60 60 A Y H 3X S+ 0 0 54 -4,-2.3 4,-2.6 1,-0.2 5,-0.3 0.839 112.8 60.7 -67.7 -33.6 0.8 -2.6 2.0 61 61 A E H 3< S+ 0 0 108 -4,-2.7 -1,-0.2 -5,-0.3 -2,-0.2 0.734 115.3 35.0 -65.7 -22.0 -2.1 -0.9 3.8 62 62 A V H << S+ 0 0 7 -4,-1.0 7,-0.4 -3,-0.7 -2,-0.2 0.801 124.6 39.7 -98.9 -40.0 -4.4 -2.6 1.4 63 63 A L H < S+ 0 0 1 -4,-2.8 -3,-0.2 1,-0.2 -2,-0.2 0.923 111.9 55.0 -75.9 -47.1 -2.6 -5.9 1.0 64 64 A S S < S+ 0 0 40 -4,-2.6 -1,-0.2 -5,-0.2 2,-0.2 0.727 99.2 84.2 -58.9 -20.9 -1.6 -6.3 4.6 65 65 A D S > S- 0 0 65 -5,-0.3 4,-0.5 1,-0.1 5,-0.2 -0.521 71.7-148.1 -84.5 152.3 -5.2 -5.9 5.5 66 66 A A T 4 S+ 0 0 80 -2,-0.2 4,-0.4 3,-0.2 -1,-0.1 0.660 99.3 37.6 -91.2 -19.6 -7.7 -8.8 5.4 67 67 A K T > S+ 0 0 154 2,-0.1 4,-1.9 3,-0.1 5,-0.2 0.857 120.1 42.3 -96.3 -48.6 -10.6 -6.6 4.3 68 68 A K H > S+ 0 0 72 -7,-0.2 4,-2.6 2,-0.2 5,-0.1 0.911 117.1 48.9 -65.5 -43.6 -9.0 -4.2 2.0 69 69 A R H X S+ 0 0 61 -4,-0.5 4,-3.2 -7,-0.4 5,-0.4 0.971 110.2 49.0 -60.5 -57.2 -6.9 -6.9 0.3 70 70 A D H > S+ 0 0 84 -4,-0.4 4,-2.3 1,-0.2 5,-0.2 0.903 114.7 46.5 -49.3 -47.2 -9.8 -9.3 -0.2 71 71 A I H X>S+ 0 0 85 -4,-1.9 4,-3.0 2,-0.2 5,-1.6 0.914 114.9 47.0 -63.3 -44.2 -11.9 -6.5 -1.7 72 72 A Y H <5S+ 0 0 44 -4,-2.6 -2,-0.2 3,-0.2 -3,-0.2 0.978 114.7 43.9 -61.8 -58.9 -9.0 -5.3 -3.9 73 73 A D H <5S+ 0 0 100 -4,-3.2 -1,-0.2 1,-0.2 -2,-0.2 0.886 120.5 44.4 -54.0 -41.8 -8.0 -8.8 -5.2 74 74 A R H <5S- 0 0 162 -4,-2.3 -2,-0.2 -5,-0.4 -3,-0.2 0.997 143.5 -7.8 -66.9 -67.0 -11.7 -9.5 -5.8 75 75 A Y T <5S- 0 0 163 -4,-3.0 2,-0.7 -5,-0.2 -3,-0.2 0.885 78.5-163.8 -96.5 -60.7 -12.9 -6.3 -7.4 76 76 A G < - 0 0 23 -5,-1.6 2,-0.3 -7,-0.1 -1,-0.1 -0.753 58.0 -7.2 113.6 -85.9 -9.9 -3.9 -7.2 77 77 A S - 0 0 114 -2,-0.7 -5,-0.0 -5,-0.1 0, 0.0 -0.958 60.4-154.0-153.2 130.5 -11.1 -0.3 -7.8 78 78 A G - 0 0 66 -2,-0.3 3,-0.1 1,-0.2 -3,-0.0 -0.487 30.1 -88.7-100.1 172.2 -14.4 1.1 -8.9 79 79 A P S S- 0 0 121 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.048 73.9 -43.6 -69.7 176.6 -15.4 4.3 -10.7 80 80 A S - 0 0 133 1,-0.1 2,-0.5 2,-0.1 0, 0.0 -0.127 61.6-169.0 -44.5 128.5 -16.1 7.7 -9.0 81 81 A S 0 0 119 -3,-0.1 -1,-0.1 1,-0.1 -3,-0.0 -0.919 360.0 360.0-131.1 107.1 -18.4 7.1 -6.0 82 82 A G 0 0 135 -2,-0.5 -1,-0.1 0, 0.0 -2,-0.1 0.317 360.0 360.0 118.8 360.0 -20.0 10.0 -4.2