==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 20-MAR-00 1EMZ . COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN E1; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.OP DE BEECK,R.MONTSERRET,S.DUVET,L.COCQUEREL,R.CACAN, . 21 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2276.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 15 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 61.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-113.6 16.1 5.5 3.6 2 2 A A - 0 0 60 1,-0.1 2,-1.9 2,-0.0 3,-0.2 -0.677 360.0-140.0 -82.7 126.2 12.6 4.0 2.8 3 3 A H >> + 0 0 122 -2,-0.4 4,-1.6 1,-0.2 3,-1.2 -0.455 37.2 160.8 -83.8 68.5 12.8 0.7 0.9 4 4 A W H 3> + 0 0 158 -2,-1.9 4,-2.3 1,-0.3 -1,-0.2 0.788 63.5 73.6 -60.8 -28.2 9.9 1.4 -1.5 5 5 A G H 34 S+ 0 0 72 -3,-0.2 -1,-0.3 1,-0.2 4,-0.1 0.890 116.4 21.2 -55.3 -37.3 11.1 -1.3 -3.9 6 6 A V H <4 S+ 0 0 105 -3,-1.2 -1,-0.2 2,-0.1 -2,-0.2 0.552 129.8 48.9-105.0 -13.5 9.7 -3.9 -1.3 7 7 A L H X S+ 0 0 59 -4,-1.6 4,-1.6 2,-0.1 3,-0.4 0.429 80.8 92.9-105.3 -2.8 7.3 -1.5 0.5 8 8 A A H X S+ 0 0 52 -4,-2.3 4,-1.9 1,-0.2 -1,-0.1 0.844 84.9 56.8 -60.8 -30.2 5.5 -0.1 -2.6 9 9 A G H > S+ 0 0 46 2,-0.2 4,-3.3 -5,-0.2 -1,-0.2 0.877 101.1 56.9 -68.1 -36.6 2.9 -2.9 -2.2 10 10 A I H > S+ 0 0 106 -3,-0.4 4,-2.6 2,-0.2 -2,-0.2 0.951 108.8 44.9 -59.9 -50.4 2.3 -1.6 1.4 11 11 A A H X S+ 0 0 51 -4,-1.6 4,-1.6 2,-0.2 -1,-0.2 0.897 114.9 49.8 -61.6 -39.3 1.4 1.9 0.0 12 12 A Y H X S+ 0 0 182 -4,-1.9 4,-1.9 1,-0.2 3,-0.3 0.964 113.0 44.9 -63.6 -52.5 -0.8 0.2 -2.7 13 13 A F H X S+ 0 0 156 -4,-3.3 4,-2.2 1,-0.2 -2,-0.2 0.871 107.0 60.5 -60.9 -37.7 -2.6 -2.0 -0.2 14 14 A S H X S+ 0 0 77 -4,-2.6 4,-1.8 -5,-0.2 -1,-0.2 0.916 107.3 45.4 -57.8 -42.7 -3.1 1.0 2.2 15 15 A M H X S+ 0 0 147 -4,-1.6 4,-3.2 -3,-0.3 -1,-0.2 0.907 111.1 52.3 -68.5 -39.6 -5.1 2.8 -0.6 16 16 A V H X S+ 0 0 51 -4,-1.9 4,-3.2 1,-0.2 -2,-0.2 0.851 107.1 54.6 -63.9 -30.8 -7.1 -0.4 -1.3 17 17 A G H X S+ 0 0 43 -4,-2.2 4,-1.2 2,-0.2 -1,-0.2 0.919 113.2 40.4 -67.7 -43.6 -7.9 -0.5 2.4 18 18 A N H < S+ 0 0 134 -4,-1.8 -2,-0.2 -5,-0.2 -1,-0.2 0.910 117.4 50.5 -70.8 -41.2 -9.3 3.1 2.1 19 19 A W H < S+ 0 0 209 -4,-3.2 -2,-0.2 1,-0.2 -3,-0.2 0.919 103.9 57.7 -61.8 -48.9 -10.9 2.2 -1.2 20 20 A A H < 0 0 71 -4,-3.2 -2,-0.2 1,-0.2 -1,-0.2 0.945 360.0 360.0 -48.2 -62.4 -12.6 -1.0 0.1 21 21 A K < 0 0 242 -4,-1.2 -1,-0.2 -5,-0.1 -2,-0.1 -0.002 360.0 360.0 64.3 360.0 -14.6 0.9 2.9