==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 28-MAR-07 2ENY . COMPND 2 MOLECULE: OBSCURIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.NAGASHIMA,K.IZUMI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7138.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 49.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 4.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 27.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 130 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -96.3 12.9 40.2 1.0 2 2 A S - 0 0 125 2,-0.1 2,-0.3 0, 0.0 0, 0.0 -0.952 360.0-163.1-128.9 113.2 9.8 38.2 0.0 3 3 A S + 0 0 131 -2,-0.5 2,-0.2 2,-0.0 0, 0.0 -0.731 47.8 51.0 -95.9 142.3 8.4 35.5 2.3 4 4 A G - 0 0 77 -2,-0.3 2,-0.3 2,-0.0 -2,-0.1 -0.493 62.0-119.5 122.0 167.5 5.9 32.9 1.1 5 5 A S - 0 0 114 -2,-0.2 -2,-0.0 1,-0.1 0, 0.0 -0.988 12.4-171.6-150.2 137.4 5.5 30.4 -1.7 6 6 A S + 0 0 126 -2,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.853 57.5 104.6 -93.6 -44.6 3.0 29.8 -4.5 7 7 A G - 0 0 60 1,-0.1 2,-0.2 0, 0.0 -2,-0.0 0.004 61.9-144.2 -39.4 139.6 4.1 26.5 -5.8 8 8 A H - 0 0 169 25,-0.0 2,-0.4 0, 0.0 -1,-0.1 -0.558 3.4-126.4-106.2 172.5 1.8 23.6 -4.7 9 9 A V + 0 0 28 -2,-0.2 2,-0.3 24,-0.0 23,-0.0 -0.940 33.2 152.4-123.1 144.1 2.5 20.0 -3.8 10 10 A G - 0 0 21 -2,-0.4 23,-2.7 77,-0.0 2,-0.8 -0.902 50.7 -67.6-154.3-178.5 0.9 16.8 -5.1 11 11 A I + 0 0 35 -2,-0.3 3,-0.3 21,-0.2 21,-0.2 -0.714 39.1 174.0 -84.7 108.4 1.4 13.1 -5.7 12 12 A T S S+ 0 0 106 -2,-0.8 2,-0.4 19,-0.4 -1,-0.2 0.673 77.6 45.3 -85.3 -19.2 4.0 12.6 -8.4 13 13 A K B S-A 31 0A 72 18,-1.3 18,-0.8 3,-0.0 -1,-0.2 -0.747 79.4-162.1-128.3 84.6 4.0 8.9 -8.0 14 14 A R - 0 0 200 -2,-0.4 15,-0.1 -3,-0.3 75,-0.0 -0.358 35.8 -89.0 -66.2 142.9 0.4 7.5 -7.8 15 15 A L - 0 0 14 67,-0.1 2,-0.3 1,-0.1 75,-0.1 0.135 46.2-146.1 -43.3 167.2 0.0 4.0 -6.4 16 16 A K - 0 0 117 13,-0.2 2,-0.2 -3,-0.1 13,-0.1 -0.931 24.1 -82.0-139.8 162.8 0.2 1.0 -8.7 17 17 A T - 0 0 81 -2,-0.3 2,-0.5 74,-0.1 76,-0.2 -0.445 41.7-163.4 -67.7 132.8 -1.3 -2.4 -9.1 18 18 A M E -e 93 0B 38 74,-1.7 76,-1.9 -2,-0.2 2,-0.5 -0.968 3.5-165.7-124.6 118.4 0.4 -5.1 -7.0 19 19 A E E +e 94 0B 113 -2,-0.5 2,-0.3 74,-0.2 76,-0.2 -0.890 18.1 161.0-106.3 127.6 -0.1 -8.8 -7.7 20 20 A V E -e 95 0B 19 74,-2.4 76,-1.6 -2,-0.5 2,-0.4 -0.904 39.4-101.0-138.8 166.6 0.9 -11.4 -5.0 21 21 A L E -e 96 0B 52 -2,-0.3 3,-0.5 74,-0.2 76,-0.2 -0.764 52.6 -89.5 -93.8 133.2 0.2 -15.0 -4.1 22 22 A E S S+ 0 0 73 74,-2.9 76,-0.2 -2,-0.4 51,-0.2 -0.112 119.4 27.8 -40.6 110.1 -2.3 -15.8 -1.3 23 23 A G S S+ 0 0 42 49,-1.4 -1,-0.2 1,-0.3 2,-0.2 0.744 98.4 115.5 102.8 31.7 -0.0 -15.8 1.7 24 24 A E - 0 0 94 -3,-0.5 48,-1.6 48,-0.2 2,-0.5 -0.646 63.6-110.0-122.2 179.7 2.7 -13.4 0.6 25 25 A S - 0 0 91 -2,-0.2 2,-0.4 46,-0.1 45,-0.2 -0.959 29.5-176.2-119.7 119.5 4.1 -10.0 1.6 26 26 A C E - B 0 69A 3 43,-0.9 43,-1.7 -2,-0.5 2,-0.6 -0.949 10.1-160.3-117.9 132.5 3.6 -7.0 -0.6 27 27 A S E - B 0 68A 52 -2,-0.4 41,-0.2 41,-0.2 2,-0.1 -0.901 12.9-150.6-115.2 104.7 5.0 -3.5 0.1 28 28 A F E - B 0 67A 1 39,-1.8 39,-1.3 -2,-0.6 2,-0.4 -0.389 9.5-144.5 -71.6 148.5 3.3 -0.7 -1.7 29 29 A E E + B 0 66A 91 37,-0.2 2,-0.3 -13,-0.1 37,-0.2 -0.943 20.6 172.3-119.5 137.9 5.3 2.4 -2.6 30 30 A C E - B 0 65A 0 35,-1.8 35,-2.1 -2,-0.4 2,-0.4 -0.940 8.4-168.9-148.0 121.0 4.1 6.0 -2.6 31 31 A V E -AB 13 64A 16 -18,-0.8 -18,-1.3 -2,-0.3 -19,-0.4 -0.897 9.2-150.4-113.2 140.0 6.1 9.2 -3.1 32 32 A L - 0 0 1 31,-1.2 -21,-0.2 -2,-0.4 -2,-0.0 -0.901 27.0-119.5-111.5 136.4 4.9 12.8 -2.6 33 33 A S S S+ 0 0 50 -23,-2.7 2,-0.2 -2,-0.4 -22,-0.1 0.827 102.2 22.8 -35.8 -43.2 6.1 15.8 -4.5 34 34 A H S S- 0 0 114 -24,-0.2 -2,-0.2 -3,-0.0 -25,-0.0 -0.710 96.0 -96.5-122.1 174.0 7.2 17.1 -1.1 35 35 A E - 0 0 115 -2,-0.2 29,-0.1 1,-0.1 -2,-0.1 0.674 45.4-153.5 -63.7 -15.9 8.1 15.6 2.3 36 36 A S + 0 0 13 1,-0.1 -1,-0.1 27,-0.1 49,-0.1 0.863 41.1 148.6 41.3 44.9 4.5 16.5 3.3 37 37 A A + 0 0 64 1,-0.2 -1,-0.1 3,-0.0 4,-0.0 0.904 53.0 73.2 -72.6 -43.2 5.7 16.7 6.9 38 38 A S S S+ 0 0 119 1,-0.1 -1,-0.2 2,-0.0 -2,-0.0 0.877 108.4 29.2 -35.2 -59.9 3.2 19.3 7.9 39 39 A D S S- 0 0 78 1,-0.1 -1,-0.1 -3,-0.0 0, 0.0 -0.851 89.9-117.4-110.3 144.0 0.4 16.8 7.8 40 40 A P - 0 0 111 0, 0.0 45,-0.8 0, 0.0 2,-0.3 -0.121 27.7-116.4 -69.7 170.5 0.7 13.0 8.5 41 41 A A B -F 84 0C 33 43,-0.2 2,-0.3 44,-0.1 43,-0.2 -0.826 20.3-151.5-112.8 151.7 -0.0 10.2 6.0 42 42 A M - 0 0 77 41,-2.3 2,-0.4 -2,-0.3 41,-0.3 -0.877 1.4-152.0-121.6 154.1 -2.7 7.5 6.1 43 43 A W + 0 0 4 -2,-0.3 7,-1.6 39,-0.2 8,-1.1 -0.967 13.1 177.2-130.6 117.3 -2.8 4.0 4.6 44 44 A T B -GH 49 81C 32 37,-2.1 37,-3.0 -2,-0.4 2,-0.6 -0.909 5.1-175.2-123.5 104.5 -6.1 2.3 3.7 45 45 A V S S- 0 0 5 3,-0.7 2,-0.6 -2,-0.5 3,-0.4 -0.872 74.5 -14.4-102.6 121.4 -5.8 -1.1 2.1 46 46 A G S S- 0 0 37 -2,-0.6 33,-0.2 33,-0.4 -1,-0.1 -0.092 131.0 -50.8 83.3 -38.6 -9.0 -2.8 0.9 47 47 A G S S+ 0 0 57 -2,-0.6 2,-0.3 1,-0.3 -1,-0.2 0.513 110.2 93.8 140.6 32.7 -11.1 -0.2 2.8 48 48 A K S S- 0 0 164 -3,-0.4 -3,-0.7 -5,-0.0 2,-0.6 -0.948 73.0-101.3-143.6 162.9 -9.9 -0.1 6.4 49 49 A T B +G 44 0C 107 -2,-0.3 -5,-0.2 -5,-0.2 -7,-0.0 -0.773 48.2 146.4 -91.3 122.3 -7.5 1.8 8.6 50 50 A V + 0 0 18 -7,-1.6 -1,-0.2 -2,-0.6 -6,-0.1 0.698 16.5 136.3-118.5 -48.1 -4.1 0.1 9.3 51 51 A G S S+ 0 0 10 -8,-1.1 7,-1.3 1,-0.1 2,-0.8 -0.011 77.6 17.9 34.7-115.6 -1.5 2.8 9.5 52 52 A S B S+C 57 0A 110 5,-0.2 2,-0.3 6,-0.0 5,-0.2 -0.740 90.1 132.4 -87.2 111.2 0.6 1.8 12.5 53 53 A S - 0 0 59 3,-1.8 -3,-0.0 -2,-0.8 5,-0.0 -0.990 66.4-109.2-155.6 156.2 0.0 -1.9 13.3 54 54 A S S S+ 0 0 116 -2,-0.3 3,-0.1 1,-0.2 -1,-0.1 0.928 121.5 31.6 -51.7 -50.9 1.9 -5.0 14.1 55 55 A R S S+ 0 0 148 1,-0.2 2,-0.8 -3,-0.1 -1,-0.2 0.977 122.8 47.5 -72.4 -59.1 1.0 -6.6 10.8 56 56 A F - 0 0 24 13,-0.1 -3,-1.8 -6,-0.1 2,-0.8 -0.767 67.9-177.9 -90.3 107.6 0.9 -3.4 8.7 57 57 A Q E -CD 52 68A 108 -2,-0.8 2,-1.8 11,-0.6 11,-0.7 -0.769 10.2-162.7-108.4 86.8 4.0 -1.3 9.4 58 58 A A E - D 0 67A 30 -7,-1.3 9,-0.2 -2,-0.8 -2,-0.1 -0.488 19.7-170.3 -70.5 85.7 3.6 1.9 7.3 59 59 A T E - D 0 66A 53 -2,-1.8 7,-1.5 7,-1.6 2,-0.4 -0.227 9.3-142.3 -73.7 166.9 7.2 3.1 7.4 60 60 A R E - D 0 65A 129 5,-0.2 2,-0.4 7,-0.0 5,-0.2 -0.998 14.6-174.6-137.0 136.5 8.4 6.5 6.3 61 61 A Q E > - D 0 64A 132 3,-3.2 3,-1.5 -2,-0.4 2,-0.8 -0.872 58.2 -74.1-134.3 101.1 11.6 7.5 4.4 62 62 A G T 3 S- 0 0 47 -2,-0.4 -1,-0.0 1,-0.3 0, 0.0 -0.301 121.5 -6.1 53.5 -97.8 12.2 11.2 3.9 63 63 A R T 3 S+ 0 0 141 -2,-0.8 -31,-1.2 -3,-0.1 2,-0.3 -0.135 125.1 77.9-118.7 35.4 9.7 11.9 1.1 64 64 A K E < -BD 31 61A 76 -3,-1.5 -3,-3.2 -33,-0.2 2,-0.4 -0.985 58.6-151.9-143.6 152.7 8.5 8.3 0.5 65 65 A Y E -BD 30 60A 12 -35,-2.1 -35,-1.8 -2,-0.3 2,-0.4 -0.978 3.8-168.0-129.4 140.2 6.2 5.8 2.2 66 66 A I E -BD 29 59A 22 -7,-1.5 -7,-1.6 -2,-0.4 2,-0.8 -0.899 5.0-164.4-131.4 104.1 6.3 2.0 2.2 67 67 A L E -BD 28 58A 0 -39,-1.3 -39,-1.8 -2,-0.4 2,-0.4 -0.780 11.9-154.6 -91.3 111.1 3.3 0.1 3.5 68 68 A V E -BD 27 57A 50 -2,-0.8 -11,-0.6 -11,-0.7 2,-0.5 -0.692 4.6-157.8 -87.9 134.5 4.2 -3.5 4.3 69 69 A V E -B 26 0A 7 -43,-1.7 -43,-0.9 -2,-0.4 2,-0.3 -0.952 6.9-168.0-116.9 125.5 1.4 -6.1 4.2 70 70 A R + 0 0 128 -2,-0.5 3,-0.1 1,-0.2 -45,-0.1 -0.829 67.1 16.9-111.8 150.1 1.6 -9.4 6.0 71 71 A E S S- 0 0 129 -2,-0.3 -1,-0.2 1,-0.2 -46,-0.1 0.941 82.0-152.8 57.9 50.5 -0.6 -12.5 5.6 72 72 A A - 0 0 8 -48,-1.6 -49,-1.4 -3,-0.3 -48,-0.2 -0.339 15.3-167.1 -57.7 125.3 -2.1 -11.3 2.3 73 73 A A > - 0 0 30 -51,-0.2 4,-0.9 -3,-0.1 -1,-0.0 -0.730 31.6-119.8-114.7 164.7 -5.6 -12.7 1.9 74 74 A P T 4 S+ 0 0 67 0, 0.0 21,-0.2 0, 0.0 3,-0.1 0.847 109.2 58.7 -69.8 -35.5 -8.0 -13.0 -1.1 75 75 A S T 4 S+ 0 0 108 1,-0.2 -3,-0.0 3,-0.0 20,-0.0 0.977 97.8 56.6 -58.4 -60.2 -10.7 -11.0 0.7 76 76 A D T 4 S+ 0 0 69 2,-0.1 3,-0.4 18,-0.0 -1,-0.2 0.841 84.0 107.7 -39.8 -42.0 -8.6 -7.9 1.2 77 77 A A < + 0 0 32 -4,-0.9 17,-0.1 1,-0.2 2,-0.1 -0.119 49.4 81.7 -43.2 126.0 -8.1 -7.9 -2.5 78 78 A G S S- 0 0 44 15,-0.2 15,-0.4 13,-0.0 2,-0.3 -0.393 90.0 -16.7 176.7 -91.3 -10.1 -5.0 -4.0 79 79 A E - 0 0 99 -3,-0.4 -33,-0.4 13,-0.2 2,-0.3 -0.929 51.3-150.4-150.8 121.6 -9.0 -1.4 -4.1 80 80 A V E - I 0 91C 1 11,-1.2 11,-1.6 -2,-0.3 2,-0.3 -0.644 13.6-168.2 -92.1 148.6 -6.2 0.4 -2.2 81 81 A V E -HI 44 90C 37 -37,-3.0 -37,-2.1 -2,-0.3 2,-0.4 -0.994 10.6-165.5-138.6 144.0 -6.3 4.1 -1.2 82 82 A F E - I 0 89C 0 7,-0.5 7,-0.7 -2,-0.3 2,-0.3 -0.923 10.9-176.2-134.1 108.8 -3.8 6.5 0.1 83 83 A S E + I 0 88C 46 -2,-0.4 -41,-2.3 -41,-0.3 2,-0.3 -0.792 7.6 165.8-105.4 147.0 -4.8 9.9 1.6 84 84 A V E > -FI 41 87C 2 3,-1.8 3,-1.6 -2,-0.3 -43,-0.2 -0.880 69.4 -19.7-162.6 126.2 -2.6 12.6 2.9 85 85 A R T 3 S- 0 0 111 -45,-0.8 3,-0.1 1,-0.3 -44,-0.1 0.760 131.6 -48.7 46.3 25.9 -3.1 16.3 3.8 86 86 A G T 3 S+ 0 0 58 1,-0.4 -1,-0.3 0, 0.0 0, 0.0 -0.337 113.6 115.8 113.5 -51.0 -6.2 15.9 1.6 87 87 A L E < -I 84 0C 45 -3,-1.6 -3,-1.8 -4,-0.1 -1,-0.4 0.047 44.0-169.2 -47.5 162.2 -4.7 14.2 -1.5 88 88 A T E -I 83 0C 73 -5,-0.2 -5,-0.2 -3,-0.1 2,-0.2 -0.977 9.7-169.7-159.9 145.3 -5.9 10.7 -2.3 89 89 A S E -I 82 0C 6 -7,-0.7 -7,-0.5 -2,-0.3 2,-0.3 -0.715 8.5-145.6-128.4 179.0 -5.0 7.9 -4.7 90 90 A K E +I 81 0C 142 -2,-0.2 2,-0.3 -9,-0.2 -9,-0.2 -0.994 19.1 159.9-149.1 151.2 -6.3 4.5 -5.8 91 91 A A E -I 80 0C 10 -11,-1.6 -11,-1.2 -2,-0.3 2,-0.4 -0.943 31.0-112.5-158.9 176.7 -5.0 1.1 -6.9 92 92 A S - 0 0 56 -2,-0.3 -74,-1.7 -13,-0.2 2,-0.5 -0.975 18.5-156.5-126.3 136.7 -5.9 -2.6 -7.3 93 93 A L E -e 18 0B 13 -2,-0.4 2,-0.4 -15,-0.4 -74,-0.2 -0.944 6.5-162.2-115.5 129.3 -4.7 -5.6 -5.4 94 94 A I E -e 19 0B 62 -76,-1.9 -74,-2.4 -2,-0.5 2,-0.4 -0.915 7.6-177.8-112.9 134.7 -4.7 -9.1 -6.7 95 95 A V E -e 20 0B 17 -2,-0.4 2,-0.5 -76,-0.2 -74,-0.2 -0.877 6.8-165.9-134.8 102.2 -4.4 -12.3 -4.6 96 96 A R E -e 21 0B 152 -76,-1.6 -74,-2.9 -2,-0.4 3,-0.1 -0.748 34.1-103.8 -90.5 128.8 -4.3 -15.6 -6.4 97 97 A E - 0 0 96 -2,-0.5 -1,-0.1 -76,-0.2 -74,-0.1 -0.138 51.3 -87.5 -48.6 139.0 -4.8 -18.7 -4.2 98 98 A R - 0 0 117 -76,-0.2 2,-0.3 -77,-0.1 -1,-0.1 0.034 55.1-179.4 -45.5 157.7 -1.6 -20.6 -3.4 99 99 A S + 0 0 81 -3,-0.1 -1,-0.1 -77,-0.1 3,-0.1 -0.939 26.1 73.3-154.3 173.5 -0.5 -23.2 -5.9 100 100 A G S S- 0 0 56 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 0.186 74.1 -98.1 92.2 146.9 2.2 -25.8 -6.7 101 101 A P S S+ 0 0 143 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.751 93.5 100.0 -69.8 -25.0 3.0 -29.2 -5.2 102 102 A S - 0 0 106 1,-0.1 2,-0.3 -3,-0.1 -3,-0.0 -0.121 66.3-138.4 -59.5 159.9 5.7 -27.6 -3.0 103 103 A S 0 0 121 1,-0.1 -1,-0.1 0, 0.0 -3,-0.0 -0.888 360.0 360.0-124.0 154.7 4.9 -26.8 0.7 104 104 A G 0 0 109 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.095 360.0 360.0-161.9 360.0 5.7 -23.9 2.9