==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-SEP-08 3EN2 . COMPND 2 MOLECULE: PROBABLE PRIMOSOMAL REPLICATION PROTEIN N; . SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA SOLANACEARUM; . AUTHOR A.P.KUZIN,H.NEELY,H.WANG,S.SAHDEV,E.L.FOOTE,R.XIAO,J.LIU, . 91 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6030.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 68.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 41 45.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 152 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 122.1 10.2 -14.9 12.2 2 2 A I + 0 0 155 1,-0.0 2,-0.2 2,-0.0 73,-0.0 -0.361 360.0 168.1 -69.5 142.6 10.1 -14.0 8.5 3 3 A N + 0 0 78 -2,-0.1 2,-0.4 71,-0.1 -1,-0.0 -0.689 20.0 152.9-153.5 86.4 11.9 -16.3 6.0 4 4 A R - 0 0 148 -2,-0.2 2,-0.4 71,-0.1 71,-0.2 -0.978 22.7-171.5-132.9 124.6 10.8 -15.2 2.5 5 5 A L E -A 74 0A 46 69,-2.5 69,-1.8 -2,-0.4 2,-0.5 -0.943 2.9-168.2-114.9 131.7 12.6 -15.6 -0.8 6 6 A Q E +A 73 0A 137 -2,-0.4 2,-0.4 67,-0.2 67,-0.2 -0.987 19.5 168.1-116.8 122.2 11.3 -14.0 -4.0 7 7 A L E -A 72 0A 16 65,-2.5 65,-3.0 -2,-0.5 2,-0.8 -0.968 30.5-158.8-146.4 125.9 13.1 -15.2 -7.1 8 8 A V E +A 71 0A 68 -2,-0.4 26,-0.4 63,-0.2 2,-0.3 -0.907 42.4 151.1 -99.5 111.3 12.5 -14.9 -10.8 9 9 A A E -A 70 0A 2 61,-2.3 61,-3.4 -2,-0.8 2,-0.4 -0.964 47.7-104.8-144.7 160.9 14.5 -17.8 -12.3 10 10 A T E -AB 69 32A 52 22,-2.7 22,-2.3 -2,-0.3 2,-0.5 -0.704 34.1-122.1 -88.0 129.5 14.6 -20.3 -15.1 11 11 A L E + B 0 31A 1 57,-3.0 56,-3.1 -2,-0.4 20,-0.2 -0.591 32.7 178.4 -70.2 120.1 13.6 -23.9 -14.5 12 12 A V E - 0 0 61 18,-3.0 2,-0.3 -2,-0.5 -1,-0.2 0.895 58.2 -28.4 -89.7 -48.7 16.7 -25.9 -15.4 13 13 A E E - B 0 30A 96 17,-1.1 17,-2.7 53,-0.1 -1,-0.4 -0.979 53.2-149.6-163.1 160.6 15.5 -29.4 -14.6 14 14 A R E - B 0 29A 79 -2,-0.3 15,-0.3 15,-0.2 2,-0.1 -0.994 16.3-125.9-141.5 147.4 13.2 -31.4 -12.4 15 15 A E - 0 0 107 13,-3.2 3,-0.1 -2,-0.3 2,-0.1 -0.347 42.7 -83.5 -84.1 169.7 13.2 -34.8 -10.8 16 16 A V - 0 0 129 1,-0.1 12,-0.4 -2,-0.1 -1,-0.1 -0.413 60.3 -89.5 -69.6 151.1 10.4 -37.4 -11.1 17 17 A X + 0 0 41 10,-0.1 2,-0.3 -3,-0.1 10,-0.2 -0.379 51.7 179.0 -64.6 137.0 7.6 -36.8 -8.5 18 18 A R E -C 26 0A 115 8,-2.4 8,-3.0 -2,-0.1 2,-0.3 -0.780 15.6-131.2-129.8 175.7 8.1 -38.6 -5.2 19 19 A Y E -C 25 0A 142 -2,-0.3 35,-0.0 6,-0.2 0, 0.0 -0.948 8.6-126.0-135.5 154.3 6.1 -38.8 -2.0 20 20 A T > - 0 0 42 4,-1.7 3,-2.4 -2,-0.3 6,-0.0 -0.444 47.6 -95.8 -85.3 166.8 6.5 -38.4 1.7 21 21 A P T 3 S+ 0 0 145 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.827 128.0 58.6 -55.9 -26.9 5.3 -41.2 3.9 22 22 A A T 3 S- 0 0 89 2,-0.1 -3,-0.0 1,-0.0 0, 0.0 0.608 122.5-107.1 -76.7 -11.3 2.0 -39.3 4.4 23 23 A G < + 0 0 44 -3,-2.4 -1,-0.0 1,-0.3 0, 0.0 0.615 67.3 150.5 95.4 12.2 1.5 -39.3 0.6 24 24 A V - 0 0 58 1,-0.1 -4,-1.7 30,-0.0 -1,-0.3 -0.704 45.5-126.3 -80.9 119.2 2.3 -35.6 0.0 25 25 A P E -C 19 0A 26 0, 0.0 30,-2.3 0, 0.0 2,-0.4 -0.340 27.6-169.4 -66.5 145.3 3.8 -35.3 -3.5 26 26 A I E -CD 18 54A 18 -8,-3.0 -8,-2.4 28,-0.2 2,-0.5 -0.992 13.4-167.9-142.1 132.7 7.1 -33.6 -4.0 27 27 A V E - D 0 53A 0 26,-2.3 26,-2.0 -2,-0.4 2,-0.3 -0.971 10.9-158.1-121.8 116.6 9.0 -32.4 -7.0 28 28 A N E + D 0 52A 29 -2,-0.5 -13,-3.2 -12,-0.4 2,-0.3 -0.700 23.3 165.9 -88.8 143.1 12.6 -31.4 -6.6 29 29 A C E -BD 14 51A 2 22,-2.7 22,-2.9 -2,-0.3 2,-0.4 -0.955 33.7-120.3-151.8 171.0 14.0 -29.1 -9.2 30 30 A L E -BD 13 50A 32 -17,-2.7 -18,-3.0 -2,-0.3 -17,-1.1 -0.973 24.3-163.4-120.5 129.5 16.9 -26.8 -10.1 31 31 A L E -BD 11 49A 0 18,-2.3 18,-2.2 -2,-0.4 2,-0.5 -0.850 6.1-149.5-112.2 149.4 16.5 -23.1 -10.8 32 32 A S E -BD 10 48A 27 -22,-2.3 -22,-2.7 -2,-0.3 2,-0.4 -0.975 10.0-160.5-122.0 127.5 18.9 -20.8 -12.5 33 33 A Y E + D 0 47A 46 14,-3.6 14,-1.8 -2,-0.5 2,-0.3 -0.875 13.8 169.9-110.1 140.3 19.1 -17.1 -11.7 34 34 A S E + D 0 46A 78 -26,-0.4 2,-0.3 -2,-0.4 12,-0.2 -0.962 33.2 84.1-147.0 124.0 20.6 -14.3 -13.8 35 35 A G E - D 0 45A 18 10,-1.9 10,-3.3 -2,-0.3 2,-0.3 -0.960 65.6 -71.7 174.6-159.8 20.3 -10.6 -13.1 36 36 A Q E - D 0 44A 127 -2,-0.3 8,-0.2 8,-0.3 2,-0.2 -0.900 30.3-167.8-128.0 156.9 21.7 -7.7 -11.1 37 37 A A E - D 0 43A 43 6,-2.3 6,-1.5 -2,-0.3 2,-0.4 -0.650 24.1-115.6-127.3-176.7 21.7 -6.6 -7.5 38 38 A X E D 0 42A 170 4,-0.2 4,-0.2 -2,-0.2 -2,-0.0 -0.901 360.0 360.0-131.5 104.2 22.6 -3.4 -5.5 39 39 A E 0 0 174 2,-1.3 -2,-0.1 -2,-0.4 0, 0.0 -0.985 360.0 360.0-131.6 360.0 25.5 -3.6 -3.1 40 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 41 42 A A 0 0 99 0, 0.0 -2,-1.3 0, 0.0 -4,-0.1 0.000 360.0 360.0 360.0 124.1 27.5 -0.4 -6.9 42 43 A A E -D 38 0A 66 -4,-0.2 2,-0.4 -6,-0.1 -4,-0.2 -0.176 360.0-162.5 -52.5 145.4 25.5 -2.6 -9.3 43 44 A R E -D 37 0A 131 -6,-1.5 -6,-2.3 2,-0.0 2,-0.2 -0.987 17.8-130.5-140.2 124.7 26.6 -6.2 -9.4 44 45 A Q E -D 36 0A 125 -2,-0.4 2,-0.4 -8,-0.2 -8,-0.3 -0.555 31.1-163.9 -71.8 135.3 25.8 -8.9 -11.9 45 46 A V E +D 35 0A 24 -10,-3.3 -10,-1.9 -2,-0.2 2,-0.4 -0.986 16.2 168.7-129.4 130.3 24.6 -12.0 -10.1 46 47 A E E +D 34 0A 152 -2,-0.4 2,-0.3 -12,-0.2 -12,-0.2 -0.996 15.4 131.7-140.4 133.6 24.4 -15.5 -11.4 47 48 A F E -D 33 0A 83 -14,-1.8 -14,-3.6 -2,-0.4 2,-0.3 -0.974 39.7-128.8-170.1 163.2 23.7 -18.8 -9.5 48 49 A S E -D 32 0A 71 -2,-0.3 2,-0.3 -16,-0.2 -16,-0.2 -0.884 23.3-168.8-119.0 152.7 21.7 -21.9 -9.4 49 50 A I E -D 31 0A 32 -18,-2.2 -18,-2.3 -2,-0.3 2,-0.1 -0.994 23.3-117.9-148.0 136.6 19.7 -23.2 -6.4 50 51 A E E +D 30 0A 78 33,-0.3 35,-2.6 -2,-0.3 2,-0.3 -0.441 42.0 169.0 -70.3 145.8 18.0 -26.4 -5.5 51 52 A A E -De 29 85A 0 -22,-2.9 -22,-2.7 33,-0.2 2,-0.3 -0.897 16.4-163.0-147.9 175.3 14.2 -26.1 -5.0 52 53 A L E -De 28 86A 14 33,-2.0 35,-2.2 -2,-0.3 2,-0.4 -0.980 12.1-143.4-163.9 153.9 11.1 -28.2 -4.5 53 54 A G E -D 27 0A 0 -26,-2.0 -26,-2.3 -2,-0.3 2,-0.4 -0.971 17.5-160.7-122.2 136.8 7.3 -28.0 -4.6 54 55 A A E > -D 26 0A 46 33,-0.5 3,-1.4 -2,-0.4 -28,-0.2 -0.922 56.2 -16.1-119.6 145.7 5.1 -29.9 -2.2 55 56 A G T >> S+ 0 0 22 -30,-2.3 4,-1.5 -2,-0.4 3,-1.3 -0.458 137.9 2.0 67.5-133.4 1.4 -30.8 -2.5 56 57 A K H 3> S+ 0 0 151 1,-0.3 4,-2.5 2,-0.2 -1,-0.3 0.859 133.9 58.8 -55.1 -36.0 -0.3 -28.7 -5.2 57 58 A X H <> S+ 0 0 23 -3,-1.4 4,-2.3 1,-0.2 -1,-0.3 0.799 101.0 55.3 -64.4 -28.9 3.0 -27.0 -5.9 58 59 A A H <> S+ 0 0 0 -3,-1.3 4,-1.9 -33,-0.3 -1,-0.2 0.914 109.1 47.0 -69.7 -41.2 4.5 -30.4 -6.8 59 60 A S H < S+ 0 0 55 -4,-1.5 4,-0.5 2,-0.2 -2,-0.2 0.908 112.0 51.2 -64.4 -43.6 1.7 -30.9 -9.3 60 61 A V H >< S+ 0 0 16 -4,-2.5 3,-1.2 1,-0.2 4,-0.2 0.929 112.4 44.1 -61.0 -48.0 2.2 -27.4 -10.8 61 62 A L H >< S+ 0 0 0 -4,-2.3 3,-1.7 1,-0.2 -1,-0.2 0.861 103.6 67.7 -64.8 -34.8 6.0 -27.9 -11.2 62 63 A D T 3< S+ 0 0 65 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.630 104.4 42.5 -61.2 -16.0 5.4 -31.4 -12.6 63 64 A R T < S+ 0 0 159 -3,-1.2 2,-0.5 -4,-0.5 -1,-0.3 0.347 90.7 104.6-112.1 3.6 3.7 -29.9 -15.7 64 65 A I S < S- 0 0 5 -3,-1.7 3,-0.1 -4,-0.2 -3,-0.0 -0.745 70.5-125.0 -92.4 129.1 6.2 -27.0 -16.3 65 66 A A > - 0 0 56 -2,-0.5 3,-1.8 1,-0.1 -54,-0.2 -0.484 29.4-105.7 -73.4 134.2 8.6 -27.4 -19.2 66 67 A P T 3 S+ 0 0 77 0, 0.0 -54,-0.2 0, 0.0 -1,-0.1 -0.328 108.7 43.1 -56.0 137.8 12.3 -27.0 -18.4 67 68 A G T 3 S+ 0 0 52 -56,-3.1 2,-0.2 1,-0.4 -55,-0.1 0.228 82.0 130.7 107.3 -11.9 13.5 -23.6 -19.7 68 69 A T < - 0 0 36 -3,-1.8 -57,-3.0 -57,-0.1 2,-0.5 -0.527 58.6-126.8 -76.6 139.0 10.4 -21.8 -18.4 69 70 A V E -A 10 0A 58 -59,-0.2 24,-1.4 -2,-0.2 2,-0.4 -0.756 30.4-163.6 -87.9 128.4 11.0 -18.6 -16.5 70 71 A L E -AF 9 92A 0 -61,-3.4 -61,-2.3 -2,-0.5 2,-0.8 -0.908 22.2-144.7-119.1 141.8 9.2 -18.6 -13.1 71 72 A E E -AF 8 91A 90 20,-3.2 20,-1.3 -2,-0.4 2,-0.3 -0.898 37.4-171.8 -99.9 106.1 8.4 -15.9 -10.6 72 73 A C E -AF 7 90A 4 -65,-3.0 -65,-2.5 -2,-0.8 2,-0.3 -0.760 22.3-178.6-108.6 152.3 8.8 -17.7 -7.3 73 74 A V E +AF 6 89A 31 16,-1.9 15,-2.3 -2,-0.3 16,-1.9 -0.985 33.6 101.2-140.0 142.0 8.0 -16.9 -3.7 74 75 A G E -AF 5 87A 5 -69,-1.8 -69,-2.5 -2,-0.3 2,-0.3 -0.946 56.8 -76.4 176.2-153.7 8.7 -19.2 -0.8 75 76 A F E - F 0 86A 84 11,-2.1 11,-3.0 -2,-0.3 2,-0.3 -0.935 31.4-115.4-138.6 159.7 11.0 -20.0 2.1 76 77 A L E + F 0 85A 62 -2,-0.3 2,-0.3 9,-0.2 9,-0.2 -0.663 37.1 165.8 -94.4 150.3 14.5 -21.6 2.7 77 78 A A E - F 0 84A 27 7,-1.6 7,-2.3 -2,-0.3 2,-0.3 -0.965 42.1 -85.0-155.4 168.8 15.0 -24.8 4.6 78 79 A R E - F 0 83A 194 -2,-0.3 5,-0.2 5,-0.2 0, 0.0 -0.646 32.5-136.3 -80.3 135.8 17.5 -27.5 5.4 79 80 A K 0 0 83 3,-2.4 -1,-0.1 -2,-0.3 4,-0.1 0.943 360.0 360.0 -56.8 -49.0 17.6 -30.2 2.7 80 81 A H 0 0 191 2,-0.3 -1,-0.1 -3,-0.1 -2,-0.0 -0.629 360.0 360.0 173.2 360.0 17.7 -32.9 5.4 81 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 82 86 A A 0 0 98 0, 0.0 -3,-2.4 0, 0.0 -2,-0.3 0.000 360.0 360.0 360.0 150.3 22.7 -27.8 2.3 83 87 A L E - F 0 78A 107 -5,-0.2 2,-0.4 -4,-0.1 -33,-0.3 -0.848 360.0-160.3-116.9 153.6 19.6 -25.6 1.8 84 88 A V E - F 0 77A 2 -7,-2.3 -7,-1.6 -2,-0.3 2,-0.7 -0.983 21.5-122.5-134.2 143.7 16.7 -25.9 -0.6 85 89 A F E -eF 51 76A 0 -35,-2.6 -33,-2.0 -2,-0.4 2,-0.7 -0.776 22.2-153.1 -88.4 109.7 14.2 -23.3 -1.8 86 90 A H E -eF 52 75A 45 -11,-3.0 -11,-2.1 -2,-0.7 2,-0.6 -0.764 11.0-148.2 -86.1 114.6 10.6 -24.3 -0.9 87 91 A I E + F 0 74A 7 -35,-2.2 -33,-0.5 -2,-0.7 -13,-0.3 -0.743 28.3 165.4 -86.8 121.4 8.3 -22.7 -3.4 88 92 A S E S+ 0 0 78 -15,-2.3 2,-0.3 -2,-0.6 -14,-0.2 0.566 70.1 30.8-108.5 -15.1 4.9 -21.8 -2.0 89 93 A G E - F 0 73A 22 -16,-1.9 -16,-1.9 2,-0.0 2,-0.3 -0.997 67.6-178.4-144.5 141.3 3.8 -19.5 -4.8 90 94 A L E + F 0 72A 33 -2,-0.3 2,-0.3 -18,-0.2 -18,-0.2 -1.000 8.0 165.3-147.7 144.5 4.5 -19.6 -8.5 91 95 A E E - F 0 71A 119 -20,-1.3 -20,-3.2 -2,-0.3 2,-0.1 -0.965 35.6-101.6-149.3 160.7 3.7 -17.7 -11.7 92 96 A H E F 0 70A 97 -2,-0.3 -22,-0.2 -22,-0.2 -24,-0.0 -0.432 360.0 360.0 -84.8 162.0 5.1 -17.5 -15.3 93 97 A H 0 0 162 -24,-1.4 -2,-0.2 -2,-0.1 -84,-0.1 0.053 360.0 360.0 75.0 360.0 7.4 -14.7 -16.7