==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 22-MAR-00 1EOE . COMPND 2 MOLECULE: POTASSIUM CHANNEL KV1.1; . SOURCE 2 ORGANISM_SCIENTIFIC: APLYSIA CALIFORNICA; . AUTHOR M.H.NANAO,S.J.CUSHMAN,A.W.JAHNG,D.DERUBEIS,S.CHOE, . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5909.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 73 73.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 15.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 32.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 66 A E 0 0 147 0, 0.0 15,-2.4 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 121.8 20.0 -2.0 107.8 2 67 A R E -A 15 0A 157 13,-0.2 2,-0.4 14,-0.1 13,-0.2 -0.680 360.0-162.6 -85.5 132.8 16.4 -1.6 106.5 3 68 A V E -A 14 0A 10 11,-2.9 11,-1.8 -2,-0.4 2,-0.5 -0.919 6.7-150.9-111.9 142.2 15.6 1.8 105.0 4 69 A V E -A 13 0A 31 -2,-0.4 40,-2.6 38,-0.3 2,-0.5 -0.986 8.4-169.9-114.4 124.5 12.0 3.2 104.3 5 70 A I E -Ab 12 44A 0 7,-2.9 7,-3.0 -2,-0.5 2,-0.8 -0.969 7.5-159.8-113.6 116.4 11.5 5.6 101.5 6 71 A N E -Ab 11 45A 8 38,-3.4 40,-2.6 -2,-0.5 2,-0.9 -0.881 6.2-171.9-101.8 107.5 8.1 7.2 101.5 7 72 A V E > S-Ab 10 46A 0 3,-3.0 3,-2.5 -2,-0.8 40,-0.2 -0.881 75.3 -40.9-101.7 103.2 7.1 8.7 98.1 8 73 A S T 3 S- 0 0 36 38,-1.9 -1,-0.2 -2,-0.9 39,-0.1 0.810 124.5 -40.0 47.4 42.5 3.9 10.6 98.6 9 74 A G T 3 S+ 0 0 40 1,-0.2 2,-0.7 37,-0.1 -1,-0.3 0.211 115.4 112.9 97.4 -14.6 2.5 7.9 101.0 10 75 A L E < -A 7 0A 61 -3,-2.5 -3,-3.0 2,-0.0 2,-0.5 -0.856 58.5-150.5 -95.7 114.0 3.8 4.9 99.0 11 76 A R E -A 6 0A 118 -2,-0.7 2,-0.4 -5,-0.2 -5,-0.2 -0.723 13.3-171.0 -98.5 131.1 6.4 3.3 101.1 12 77 A F E -A 5 0A 21 -7,-3.0 -7,-2.9 -2,-0.5 2,-0.4 -0.901 6.5-156.0-112.1 145.0 9.4 1.4 99.6 13 78 A E E +A 4 0A 107 -2,-0.4 2,-0.3 -9,-0.2 -9,-0.2 -0.970 24.1 144.3-125.5 138.7 11.8 -0.7 101.6 14 79 A T E -A 3 0A 11 -11,-1.8 -11,-2.9 -2,-0.4 2,-0.3 -0.914 47.3 -88.3-154.0 178.8 15.4 -1.6 100.7 15 80 A Q E >> -A 2 0A 75 -2,-0.3 4,-1.3 -13,-0.2 3,-0.6 -0.763 29.6-126.0 -92.9 148.0 18.8 -2.2 102.3 16 81 A L H 3> S+ 0 0 36 -15,-2.4 4,-2.5 -2,-0.3 3,-0.5 0.914 112.6 59.0 -51.7 -42.1 21.2 0.6 102.9 17 82 A K H 3> S+ 0 0 106 -16,-0.3 4,-0.9 1,-0.3 -1,-0.2 0.877 99.4 58.5 -59.5 -34.1 23.8 -1.5 101.0 18 83 A T H <4 S+ 0 0 30 -3,-0.6 3,-0.4 1,-0.2 -1,-0.3 0.923 111.4 39.0 -60.5 -43.7 21.5 -1.5 98.0 19 84 A L H >< S+ 0 0 0 -4,-1.3 3,-1.6 -3,-0.5 -2,-0.2 0.856 109.4 61.3 -74.1 -37.3 21.4 2.3 97.8 20 85 A N H 3< S+ 0 0 64 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.616 80.4 82.1 -71.0 -11.7 25.1 2.8 98.6 21 86 A Q T 3< S+ 0 0 90 -4,-0.9 -1,-0.3 -3,-0.4 -2,-0.1 0.769 97.5 45.0 -63.3 -19.0 26.3 0.8 95.6 22 87 A F < + 0 0 54 -3,-1.6 3,-0.5 -4,-0.2 6,-0.4 -0.666 69.9 169.2-122.5 76.3 25.7 4.1 93.6 23 88 A P + 0 0 70 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 0.676 68.0 66.8 -62.9 -25.1 27.3 6.8 95.8 24 89 A D S S+ 0 0 145 62,-0.1 2,-0.3 4,-0.1 3,-0.1 -0.309 89.8 80.3 -92.3 42.9 27.2 9.5 93.2 25 90 A T S > S- 0 0 4 -2,-0.5 4,-0.6 -3,-0.5 60,-0.2 -0.889 92.5-104.8-132.0 173.3 23.4 9.7 93.2 26 91 A L T >4 S+ 0 0 5 58,-2.0 3,-1.2 -2,-0.3 7,-0.7 0.969 120.1 39.6 -63.3 -53.6 20.9 11.4 95.6 27 92 A L T 34 S+ 0 0 0 57,-0.4 -1,-0.2 1,-0.3 -8,-0.1 0.731 114.3 54.8 -73.6 -17.4 19.8 8.2 97.4 28 93 A G T 34 S+ 0 0 3 -6,-0.4 -1,-0.3 1,-0.1 -2,-0.2 0.544 97.2 73.8 -90.7 -7.5 23.3 6.7 97.3 29 94 A N XX - 0 0 37 -3,-1.2 4,-3.0 -4,-0.6 3,-1.3 -0.920 67.2-155.4-112.0 112.3 24.9 9.8 99.1 30 95 A P H 3> S+ 0 0 45 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.864 94.6 56.7 -53.2 -41.8 24.1 10.2 102.8 31 96 A Q H 34 S+ 0 0 142 1,-0.2 4,-0.2 2,-0.2 -5,-0.1 0.817 115.3 37.0 -62.8 -30.2 24.7 13.9 102.7 32 97 A K H X4 S+ 0 0 77 -3,-1.3 3,-1.1 -6,-0.3 4,-0.3 0.903 118.0 46.9 -86.3 -47.8 22.0 14.3 100.0 33 98 A R H >< S+ 0 0 13 -4,-3.0 3,-2.1 -7,-0.7 -2,-0.2 0.842 102.1 65.3 -67.1 -28.5 19.5 11.7 101.1 34 99 A N G >< S+ 0 0 80 -4,-2.5 3,-1.3 -5,-0.3 -1,-0.3 0.729 86.5 70.9 -70.1 -15.2 19.6 12.9 104.7 35 100 A R G < S+ 0 0 197 -3,-1.1 -1,-0.3 1,-0.2 -2,-0.2 0.732 101.2 47.5 -64.6 -18.3 18.1 16.3 103.6 36 101 A Y G < S+ 0 0 82 -3,-2.1 9,-3.0 -4,-0.3 -1,-0.2 0.274 83.1 127.4-107.6 8.9 14.9 14.3 103.0 37 102 A Y E < -C 44 0A 93 -3,-1.3 7,-0.2 7,-0.2 -3,-0.0 -0.441 48.7-151.0 -69.8 136.7 14.9 12.4 106.4 38 103 A D E >> -C 43 0A 24 5,-2.9 4,-1.8 -2,-0.2 5,-1.2 -0.940 6.2-166.8-109.3 103.1 11.7 12.7 108.4 39 104 A P T 45S+ 0 0 105 0, 0.0 -1,-0.1 0, 0.0 5,-0.0 0.780 83.7 58.9 -66.1 -26.8 12.6 12.5 112.1 40 105 A L T 45S+ 0 0 138 1,-0.2 -2,-0.0 3,-0.1 0, 0.0 0.873 121.2 24.3 -67.8 -37.4 9.0 11.9 113.2 41 106 A R T 45S- 0 0 135 -3,-0.4 -1,-0.2 2,-0.2 3,-0.1 0.486 97.4-126.0-113.1 -3.9 8.6 8.8 111.1 42 107 A N T <5S+ 0 0 110 -4,-1.8 2,-0.3 1,-0.2 -38,-0.3 0.949 74.4 103.8 56.6 51.9 12.1 7.5 110.7 43 108 A E E > S+ 0 0 106 2,-0.2 3,-1.4 1,-0.1 4,-0.5 0.940 80.8 53.1 -81.5 -52.2 4.7 7.7 92.7 51 116 A P T 34 S+ 0 0 50 0, 0.0 3,-0.5 0, 0.0 4,-0.4 0.785 103.7 60.6 -63.3 -23.6 4.6 5.3 89.7 52 117 A S T >> S+ 0 0 0 1,-0.2 4,-1.3 2,-0.1 3,-1.1 0.803 89.5 71.6 -66.0 -32.4 8.1 6.4 88.6 53 118 A F H <> S+ 0 0 1 -3,-1.4 4,-2.8 -4,-0.4 5,-0.3 0.811 81.3 68.4 -68.6 -25.1 9.7 5.3 91.9 54 119 A D H 3X S+ 0 0 103 -4,-0.5 4,-1.9 -3,-0.5 -1,-0.3 0.896 107.7 42.4 -50.1 -42.8 9.4 1.5 91.1 55 120 A A H <> S+ 0 0 7 -3,-1.1 4,-1.6 -4,-0.4 -1,-0.2 0.836 109.7 56.5 -76.4 -31.1 12.0 2.1 88.4 56 121 A I H X S+ 0 0 0 -4,-1.3 4,-0.9 2,-0.2 -2,-0.2 0.954 112.9 41.2 -65.6 -46.7 14.2 4.4 90.5 57 122 A L H >X S+ 0 0 8 -4,-2.8 4,-2.0 1,-0.2 3,-0.9 0.928 110.8 56.4 -68.5 -37.7 14.6 1.7 93.2 58 123 A Y H 3X S+ 0 0 91 -4,-1.9 4,-2.7 -5,-0.3 7,-0.4 0.810 95.2 68.0 -65.4 -27.0 15.0 -1.1 90.6 59 124 A F H 3<>S+ 0 0 7 -4,-1.6 5,-2.5 1,-0.2 6,-0.4 0.914 107.8 38.6 -53.7 -44.2 17.9 0.9 89.1 60 125 A Y H X<5S+ 0 0 0 -3,-0.9 3,-1.2 -4,-0.9 -2,-0.2 0.917 115.8 50.6 -72.9 -43.0 19.8 0.1 92.4 61 126 A Q H 3<5S+ 0 0 105 -4,-2.0 -2,-0.2 1,-0.3 -1,-0.2 0.840 112.1 47.2 -64.4 -34.0 18.5 -3.4 92.8 62 127 A S T 3<5S- 0 0 38 -4,-2.7 -1,-0.3 3,-0.2 -2,-0.2 0.377 117.8-107.1 -90.1 -0.9 19.4 -4.5 89.3 63 128 A G T < 5S- 0 0 44 -3,-1.2 -3,-0.2 -4,-0.2 -2,-0.1 0.796 88.1 -30.1 76.1 24.2 22.9 -2.9 89.4 64 129 A G S - 0 0 24 0, 0.0 3,-2.1 0, 0.0 8,-0.1 -0.504 21.7-127.8 -62.3 137.7 7.4 2.0 83.5 70 135 A R T 3 S+ 0 0 97 1,-0.3 4,-0.1 -2,-0.2 -2,-0.1 0.802 106.9 59.8 -66.0 -27.7 5.1 1.9 80.5 71 136 A N T 3 S+ 0 0 125 -20,-0.1 -1,-0.3 2,-0.1 -19,-0.1 0.481 92.0 81.7 -74.9 -2.9 2.4 3.6 82.5 72 137 A V S < S- 0 0 3 -3,-2.1 5,-0.0 -21,-0.1 -1,-0.0 -0.931 84.0-118.9-111.2 123.7 4.5 6.7 83.1 73 138 A P > - 0 0 70 0, 0.0 4,-2.8 0, 0.0 5,-0.3 -0.091 22.0-117.9 -57.6 142.6 4.9 9.4 80.5 74 139 A L H > S+ 0 0 68 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.865 113.5 48.8 -46.9 -45.6 8.3 10.1 79.0 75 140 A D H > S+ 0 0 101 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.923 111.8 48.9 -70.6 -40.6 8.3 13.7 80.3 76 141 A V H > S+ 0 0 43 1,-0.2 4,-1.5 2,-0.2 -2,-0.2 0.934 114.4 45.1 -61.0 -48.1 7.3 12.7 83.8 77 142 A F H X S+ 0 0 0 -4,-2.8 4,-2.2 1,-0.2 5,-0.2 0.883 107.9 56.8 -67.6 -37.9 9.9 10.0 84.0 78 143 A S H X S+ 0 0 15 -4,-2.4 4,-1.7 -5,-0.3 -1,-0.2 0.887 105.1 52.4 -59.5 -38.1 12.7 12.1 82.6 79 144 A E H X S+ 0 0 123 -4,-1.6 4,-2.2 1,-0.2 -1,-0.2 0.887 109.1 50.9 -66.8 -34.8 12.2 14.8 85.3 80 145 A E H X S+ 0 0 11 -4,-1.5 4,-2.6 2,-0.2 5,-0.2 0.941 106.2 51.6 -69.2 -45.3 12.4 12.1 88.0 81 146 A I H <>S+ 0 0 5 -4,-2.2 5,-1.7 1,-0.2 4,-0.4 0.902 111.6 49.9 -61.8 -33.9 15.7 10.5 86.8 82 147 A K H ><5S+ 0 0 124 -4,-1.7 3,-0.9 -5,-0.2 -1,-0.2 0.928 110.4 49.3 -65.2 -43.4 17.2 14.0 86.8 83 148 A F H 3<5S+ 0 0 43 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.911 110.8 49.1 -61.0 -47.0 16.0 14.7 90.3 84 149 A Y T 3<5S- 0 0 0 -4,-2.6 -58,-2.0 -5,-0.1 -57,-0.4 0.552 106.2-132.7 -73.3 -3.6 17.4 11.4 91.7 85 150 A E T < 5 + 0 0 80 -3,-0.9 -3,-0.2 -4,-0.4 -2,-0.1 0.917 37.9 171.6 57.1 49.5 20.7 12.3 90.0 86 151 A L < - 0 0 14 -5,-1.7 4,-0.3 1,-0.2 -1,-0.1 0.664 46.6-113.5 -71.9 -12.1 21.1 8.8 88.4 87 152 A G > - 0 0 40 -6,-0.3 4,-2.3 2,-0.1 5,-0.2 0.042 21.0 -79.9 102.3 155.1 24.1 10.2 86.4 88 153 A E H > S+ 0 0 124 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.877 121.4 57.4 -61.2 -43.5 25.1 11.0 82.8 89 154 A N H > S+ 0 0 60 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.914 112.3 41.2 -54.4 -47.4 25.9 7.4 81.8 90 155 A A H > S+ 0 0 3 -4,-0.3 4,-2.3 1,-0.2 -1,-0.2 0.890 112.9 54.6 -70.0 -37.2 22.4 6.1 82.8 91 156 A F H X S+ 0 0 32 -4,-2.3 4,-2.5 1,-0.2 -2,-0.2 0.888 108.3 50.0 -63.5 -38.1 20.8 9.2 81.2 92 157 A E H X S+ 0 0 111 -4,-2.9 4,-2.5 2,-0.2 -1,-0.2 0.917 109.6 49.5 -61.4 -49.1 22.6 8.4 78.0 93 158 A R H X S+ 0 0 108 -4,-2.0 4,-2.3 1,-0.2 -2,-0.2 0.870 113.1 49.2 -58.8 -35.5 21.4 4.8 78.0 94 159 A Y H X S+ 0 0 2 -4,-2.3 4,-1.9 2,-0.2 -2,-0.2 0.923 108.4 50.5 -71.8 -45.3 17.9 6.0 78.6 95 160 A R H X S+ 0 0 65 -4,-2.5 4,-1.2 2,-0.2 -2,-0.2 0.932 112.0 49.5 -57.6 -45.8 17.9 8.6 75.8 96 161 A E H >< S+ 0 0 72 -4,-2.5 3,-1.0 1,-0.2 -2,-0.2 0.955 111.2 48.4 -55.4 -52.1 19.1 6.0 73.4 97 162 A D H 3< S+ 0 0 108 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.780 117.1 42.3 -62.4 -30.1 16.4 3.5 74.5 98 163 A E H 3< S- 0 0 56 -4,-1.9 2,-0.4 -3,-0.2 -1,-0.3 0.516 115.5-110.7 -93.8 -9.7 13.7 6.1 74.2 99 164 A G << 0 0 59 -4,-1.2 -4,-0.1 -3,-1.0 -1,-0.0 -0.657 360.0 360.0 118.0 -79.0 14.9 7.7 70.9 100 165 A F 0 0 127 -2,-0.4 -1,-0.1 -6,-0.1 -5,-0.1 0.939 360.0 360.0 -61.8 360.0 16.2 11.2 71.7