==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 22-MAR-00 1EOF . COMPND 2 MOLECULE: POTASSIUM CHANNEL KV1.1; . SOURCE 2 ORGANISM_SCIENTIFIC: APLYSIA CALIFORNICA; . AUTHOR M.H.NANAO,S.J.CUSHMAN,A.W.JAHNG,D.DERUBEIS,S.CHOE, . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5969.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 75 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 16.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 33.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 66 A E 0 0 160 0, 0.0 15,-1.8 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 136.8 10.3 31.5 108.1 2 67 A R E -A 15 0A 158 13,-0.2 2,-0.4 14,-0.1 13,-0.2 -0.724 360.0-151.9 -89.2 135.0 13.6 31.3 106.3 3 68 A V E -A 14 0A 9 11,-2.8 11,-1.6 -2,-0.4 2,-0.5 -0.920 4.3-156.9-113.8 135.4 14.3 28.0 104.6 4 69 A V E -A 13 0A 35 -2,-0.4 40,-2.6 38,-0.2 2,-0.7 -0.942 5.5-170.0-112.3 120.2 17.8 26.6 104.0 5 70 A I E -Ab 12 44A 1 7,-2.8 7,-2.2 -2,-0.5 2,-0.8 -0.927 7.9-159.5-113.8 108.6 18.2 24.1 101.1 6 71 A N E -Ab 11 45A 9 38,-3.1 40,-2.7 -2,-0.7 2,-0.8 -0.778 7.9-174.0 -92.4 104.2 21.7 22.4 101.2 7 72 A V E > S-Ab 10 46A 0 3,-2.9 3,-2.9 -2,-0.8 40,-0.2 -0.862 73.2 -41.5-102.4 104.7 22.5 21.0 97.8 8 73 A S T 3 S- 0 0 41 38,-1.6 -1,-0.2 -2,-0.8 39,-0.1 0.789 124.6 -41.0 47.5 34.9 25.8 19.0 98.1 9 74 A G T 3 S+ 0 0 41 1,-0.2 2,-0.8 37,-0.1 -1,-0.3 0.167 116.7 111.9 102.9 -18.9 27.3 21.8 100.3 10 75 A L E < -A 7 0A 62 -3,-2.9 -3,-2.9 2,-0.0 2,-0.4 -0.812 57.1-153.6 -92.9 109.8 25.8 24.7 98.3 11 76 A R E -A 6 0A 122 -2,-0.8 2,-0.3 -5,-0.2 -5,-0.2 -0.696 11.7-170.9 -91.0 133.6 23.2 26.3 100.5 12 77 A F E -A 5 0A 26 -7,-2.2 -7,-2.8 -2,-0.4 2,-0.4 -0.889 6.2-155.4-117.7 150.9 20.3 28.3 99.1 13 78 A E E +A 4 0A 105 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.977 22.5 147.7-129.7 142.5 17.9 30.4 101.1 14 79 A T E -A 3 0A 11 -11,-1.6 -11,-2.8 -2,-0.4 2,-0.3 -0.952 46.6 -83.8-159.9 172.2 14.3 31.4 100.4 15 80 A Q E >> -A 2 0A 83 -2,-0.3 4,-1.4 -13,-0.2 3,-0.6 -0.663 31.3-126.4 -88.9 142.6 11.0 32.2 102.0 16 81 A L H 3> S+ 0 0 37 -15,-1.8 4,-2.0 -2,-0.3 -1,-0.1 0.861 113.5 56.1 -52.6 -37.4 8.6 29.4 102.9 17 82 A K H 3> S+ 0 0 114 1,-0.2 4,-1.0 -16,-0.2 -1,-0.3 0.892 100.1 60.0 -62.4 -40.4 5.9 31.3 100.9 18 83 A T H X4 S+ 0 0 29 -3,-0.6 3,-0.5 1,-0.2 -1,-0.2 0.906 110.2 39.2 -55.1 -47.1 8.2 31.2 97.9 19 84 A L H >< S+ 0 0 0 -4,-1.4 3,-1.3 1,-0.2 -1,-0.2 0.856 110.6 60.5 -73.4 -34.6 8.3 27.4 97.7 20 85 A N H 3< S+ 0 0 63 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.593 79.7 81.7 -71.9 -10.8 4.7 27.0 98.7 21 86 A Q T << S+ 0 0 93 -4,-1.0 -1,-0.3 -3,-0.5 -2,-0.1 0.684 97.8 47.4 -68.2 -12.5 3.2 28.8 95.7 22 87 A F S X S+ 0 0 54 -3,-1.3 3,-0.7 -4,-0.1 6,-0.3 -0.607 70.3 168.7-127.4 70.8 3.8 25.5 93.9 23 88 A P T 3 + 0 0 70 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.578 68.9 67.8 -57.6 -17.5 2.3 22.9 96.3 24 89 A D T 3 S+ 0 0 137 62,-0.1 2,-0.3 -3,-0.1 3,-0.1 -0.142 87.8 83.8-100.1 38.3 2.4 20.1 93.7 25 90 A T S <> S- 0 0 4 -3,-0.7 4,-0.6 -6,-0.1 60,-0.2 -0.822 90.2-108.1-129.2 168.7 6.2 20.0 93.7 26 91 A L T >4 S+ 0 0 4 58,-2.0 3,-0.9 -2,-0.3 7,-0.7 0.965 121.3 39.5 -64.1 -50.2 8.7 18.2 95.9 27 92 A L T 34 S+ 0 0 1 57,-0.4 -1,-0.2 1,-0.2 -8,-0.1 0.718 114.2 54.7 -71.6 -21.9 9.9 21.5 97.5 28 93 A G T 34 S+ 0 0 2 -6,-0.3 -1,-0.2 1,-0.1 -2,-0.2 0.507 97.4 72.7 -90.6 -3.1 6.4 22.9 97.7 29 94 A N XX - 0 0 37 -3,-0.9 4,-2.4 -4,-0.6 3,-2.2 -0.898 66.2-157.2-116.9 104.9 4.9 19.9 99.5 30 95 A P H 3> S+ 0 0 44 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.848 94.8 58.6 -45.1 -41.7 5.9 19.6 103.2 31 96 A Q H 34 S+ 0 0 140 1,-0.2 4,-0.1 2,-0.2 -5,-0.1 0.795 114.8 36.4 -61.3 -28.3 5.1 15.9 103.1 32 97 A K H X4 S+ 0 0 82 -3,-2.2 3,-1.1 -6,-0.2 4,-0.2 0.895 118.6 44.7 -91.9 -46.4 7.7 15.4 100.3 33 98 A R H >< S+ 0 0 14 -4,-2.4 3,-2.2 -7,-0.7 -2,-0.2 0.825 103.1 66.7 -69.1 -28.6 10.4 17.9 101.3 34 99 A N G >< S+ 0 0 76 -4,-2.3 3,-1.3 -5,-0.4 -1,-0.2 0.694 85.6 70.7 -65.4 -17.1 10.4 16.8 104.9 35 100 A R G < S+ 0 0 202 -3,-1.1 -1,-0.3 1,-0.3 -2,-0.2 0.679 103.2 45.5 -70.2 -15.2 11.7 13.4 103.8 36 101 A Y G < S+ 0 0 81 -3,-2.2 9,-2.3 -4,-0.2 -1,-0.3 0.209 83.4 129.0-110.7 12.9 14.9 15.4 103.2 37 102 A Y E < -C 44 0A 90 -3,-1.3 7,-0.2 7,-0.2 3,-0.1 -0.530 51.0-146.2 -73.6 133.5 14.9 17.3 106.4 38 103 A D E >>> -C 43 0A 26 5,-3.3 4,-1.4 -2,-0.3 5,-0.9 -0.866 9.0-166.8 -99.9 100.2 18.2 17.2 108.3 39 104 A P T 345S+ 0 0 107 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.846 84.5 56.9 -57.0 -33.4 17.2 17.3 112.0 40 105 A L T 345S+ 0 0 135 1,-0.2 -3,-0.0 -3,-0.1 -2,-0.0 0.851 120.1 24.8 -68.3 -37.3 20.8 17.9 113.0 41 106 A R T <45S- 0 0 136 -3,-0.5 -1,-0.2 2,-0.2 3,-0.1 0.365 98.3-124.5-111.7 5.5 21.4 21.1 110.9 42 107 A N T <5S+ 0 0 114 -4,-1.4 2,-0.3 1,-0.2 -38,-0.2 0.951 76.6 96.7 49.2 58.0 17.8 22.3 110.6 43 108 A E E - 0 0 53 -2,-0.2 4,-0.6 1,-0.1 -1,-0.1 -0.243 43.1-162.1 -53.4 123.2 23.8 18.3 91.2 50 115 A R H >> S+ 0 0 105 2,-0.2 3,-1.2 1,-0.2 4,-0.6 0.949 80.5 56.3 -76.6 -54.6 24.7 21.8 92.3 51 116 A P H 34 S+ 0 0 75 0, 0.0 4,-0.4 0, 0.0 3,-0.3 0.739 105.5 56.4 -53.2 -24.0 24.7 23.9 89.1 52 117 A S H >> S+ 0 0 0 1,-0.2 4,-1.2 2,-0.2 3,-0.7 0.807 90.1 70.1 -79.4 -30.7 21.1 22.8 88.4 53 118 A F H S+ 0 0 9 -3,-0.7 4,-0.8 -4,-0.4 12,-0.3 0.762 111.5 57.6 -69.7 -26.1 17.4 27.2 87.9 56 121 A I H X S+ 0 0 0 -4,-1.2 4,-0.7 2,-0.2 -2,-0.2 0.927 110.4 41.2 -70.8 -44.6 15.2 25.1 90.2 57 122 A L H >X S+ 0 0 13 -4,-2.6 4,-2.0 1,-0.2 3,-1.0 0.885 109.7 57.5 -70.7 -39.4 14.9 27.8 92.8 58 123 A Y H 3X S+ 0 0 95 -4,-2.1 4,-2.4 -5,-0.3 7,-0.4 0.767 95.3 68.6 -63.2 -22.6 14.5 30.6 90.3 59 124 A F H 3<>S+ 0 0 4 -4,-0.8 5,-2.1 -3,-0.2 4,-0.5 0.906 106.5 38.4 -60.6 -41.0 11.5 28.6 89.0 60 125 A Y H X<5S+ 0 0 0 -3,-1.0 3,-0.9 -4,-0.7 -2,-0.2 0.936 117.3 47.8 -75.2 -48.4 9.7 29.4 92.3 61 126 A Q H 3<5S+ 0 0 106 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.785 113.2 50.1 -64.0 -28.3 11.0 33.0 92.6 62 127 A S T 3<5S- 0 0 34 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.575 114.6-111.8 -87.7 -12.5 10.1 33.8 88.9 63 128 A G T < 5S- 0 0 48 -3,-0.9 -3,-0.2 -4,-0.5 -4,-0.1 0.675 87.7 -26.4 90.1 16.7 6.6 32.4 89.1 64 129 A G S - 0 0 38 0, 0.0 3,-1.7 0, 0.0 8,-0.1 -0.422 23.8-124.1 -63.1 138.1 21.5 26.9 82.7 70 135 A V T 3 S+ 0 0 148 1,-0.3 -2,-0.1 -2,-0.1 0, 0.0 0.804 109.5 52.3 -52.7 -32.9 23.6 26.9 79.5 71 136 A A T 3 S+ 0 0 90 -20,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.610 90.6 88.9 -82.3 -12.4 26.4 25.0 81.2 72 137 A V S < S- 0 0 3 -3,-1.7 5,-0.1 -21,-0.1 -1,-0.0 -0.785 84.7-113.9 -93.9 119.8 24.2 22.2 82.5 73 138 A P > - 0 0 70 0, 0.0 4,-2.4 0, 0.0 5,-0.3 -0.048 19.7-121.4 -47.9 145.5 23.8 19.2 80.1 74 139 A L H > S+ 0 0 67 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.889 111.9 49.0 -56.8 -44.7 20.3 18.6 78.7 75 140 A D H > S+ 0 0 98 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.835 111.4 49.3 -67.9 -33.7 20.1 15.0 80.2 76 141 A V H > S+ 0 0 36 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.968 112.5 45.1 -69.7 -54.1 21.3 16.1 83.7 77 142 A F H X S+ 0 0 0 -4,-2.4 4,-2.9 1,-0.2 5,-0.3 0.878 109.3 56.7 -57.9 -41.3 18.8 19.0 84.0 78 143 A S H X S+ 0 0 26 -4,-2.0 4,-1.7 -5,-0.3 -1,-0.2 0.919 107.6 48.6 -57.5 -44.2 16.0 16.9 82.7 79 144 A E H X S+ 0 0 126 -4,-1.4 4,-2.4 1,-0.2 -1,-0.2 0.924 112.1 50.4 -61.7 -43.5 16.6 14.4 85.5 80 145 A E H X S+ 0 0 10 -4,-2.1 4,-2.5 2,-0.2 -2,-0.2 0.939 108.7 47.9 -61.6 -51.7 16.7 17.2 88.1 81 146 A I H <>S+ 0 0 4 -4,-2.9 5,-1.7 1,-0.2 6,-0.2 0.863 113.0 52.3 -59.5 -32.7 13.5 18.8 87.1 82 147 A K H ><5S+ 0 0 43 -4,-1.7 3,-1.3 -5,-0.3 -1,-0.2 0.926 108.6 48.6 -67.9 -44.6 11.9 15.4 87.2 83 148 A F H 3<5S+ 0 0 46 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.878 110.9 49.9 -63.2 -38.8 13.2 14.6 90.7 84 149 A Y T 3<5S- 0 0 0 -4,-2.5 -58,-2.0 -5,-0.2 -57,-0.4 0.425 106.9-134.4 -80.8 3.5 12.0 18.0 92.0 85 150 A E T < 5 + 0 0 79 -3,-1.3 -3,-0.2 -60,-0.2 -2,-0.1 0.910 36.4 172.8 43.8 61.8 8.6 17.1 90.4 86 151 A L < - 0 0 13 -5,-1.7 4,-0.2 1,-0.2 -1,-0.1 0.618 45.4-106.4 -75.4 -11.1 8.1 20.5 88.8 87 152 A G > - 0 0 36 -6,-0.2 4,-1.8 -5,-0.1 -1,-0.2 -0.121 18.0 -89.6 106.5 157.1 5.0 19.3 86.9 88 153 A E H > S+ 0 0 127 2,-0.2 4,-2.0 1,-0.2 5,-0.2 0.898 119.5 60.0 -70.7 -42.3 3.9 18.4 83.4 89 154 A N H > S+ 0 0 64 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.887 114.6 36.8 -53.1 -41.4 2.8 21.9 82.5 90 155 A A H > S+ 0 0 3 -4,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.817 111.5 59.0 -81.1 -32.8 6.4 23.1 83.1 91 156 A F H X S+ 0 0 60 -4,-1.8 4,-1.5 2,-0.2 -2,-0.2 0.756 107.2 50.5 -67.8 -22.8 7.9 19.9 81.7 92 157 A E H X S+ 0 0 112 -4,-2.0 4,-2.6 2,-0.2 5,-0.3 0.959 107.4 48.8 -77.1 -56.3 6.1 20.7 78.4 93 158 A R H X S+ 0 0 108 -4,-1.5 4,-1.5 1,-0.3 -2,-0.2 0.826 113.3 53.3 -51.7 -30.3 7.3 24.4 78.2 94 159 A Y H X S+ 0 0 2 -4,-1.7 4,-1.8 2,-0.2 -1,-0.3 0.897 108.2 46.6 -72.8 -43.0 10.7 22.8 78.8 95 160 A R H X S+ 0 0 66 -4,-1.5 4,-2.4 -3,-0.3 5,-0.3 0.935 112.7 48.4 -66.5 -46.8 10.5 20.3 76.0 96 161 A E H < S+ 0 0 71 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.920 112.4 51.4 -58.6 -42.7 9.3 22.8 73.4 97 162 A D H < S+ 0 0 108 -4,-1.5 -1,-0.2 -5,-0.3 -2,-0.2 0.841 115.0 40.6 -63.2 -36.8 12.0 25.1 74.5 98 163 A E H < S- 0 0 57 -4,-1.8 -1,-0.2 -5,-0.1 -2,-0.2 0.715 120.1-103.8 -86.2 -23.0 14.8 22.5 74.2 99 164 A G < 0 0 63 -4,-2.4 -3,-0.1 -5,-0.2 -4,-0.1 -0.132 360.0 360.0 130.7 -41.1 13.4 21.0 70.9 100 165 A F 0 0 128 -5,-0.3 -1,-0.1 -6,-0.1 -5,-0.0 0.653 360.0 360.0 -94.8 360.0 11.7 17.7 71.9