==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 30-MAR-07 2EQE . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.P.ZHANG,T.NAGASIMA,F.HAYAHSI,S.YOKOYAMA,RIKEN STRUCTURAL . 48 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4285.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 35.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 4.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 82.7 -15.5 -7.0 21.4 2 2 A S - 0 0 89 1,-0.1 0, 0.0 3,-0.1 0, 0.0 -0.437 360.0-133.6 -84.7 160.5 -16.1 -8.0 17.8 3 3 A S S S- 0 0 134 -2,-0.1 -1,-0.1 1,-0.1 0, 0.0 0.952 85.4 -27.3 -77.6 -54.0 -19.2 -9.7 16.5 4 4 A G + 0 0 64 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.267 68.9 178.8-165.1 67.9 -17.6 -12.5 14.4 5 5 A S + 0 0 74 1,-0.2 -3,-0.1 2,-0.0 0, 0.0 -0.629 4.3 176.5 -79.5 126.5 -14.2 -11.7 13.0 6 6 A S + 0 0 130 -2,-0.4 -1,-0.2 2,-0.1 0, 0.0 0.883 68.4 29.1 -93.7 -51.8 -12.7 -14.5 11.0 7 7 A G S S- 0 0 66 1,-0.2 -2,-0.0 0, 0.0 0, 0.0 0.519 115.0 -33.7 -81.3-131.4 -9.4 -13.1 9.7 8 8 A T - 0 0 85 1,-0.1 -1,-0.2 0, 0.0 -2,-0.1 -0.653 66.1-101.0 -96.2 152.0 -7.4 -10.4 11.4 9 9 A P + 0 0 115 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.371 66.8 97.6 -69.7 146.1 -8.7 -7.5 13.6 10 10 A G - 0 0 62 -2,-0.1 2,-0.5 3,-0.0 3,-0.1 -0.836 62.7-100.2 154.5 168.5 -9.0 -4.0 12.0 11 11 A D S S- 0 0 152 -2,-0.2 0, 0.0 1,-0.2 0, 0.0 -0.970 94.9 -15.0-125.0 119.2 -11.2 -1.5 10.4 12 12 A R S S+ 0 0 164 -2,-0.5 -1,-0.2 1,-0.0 -2,-0.0 0.907 88.3 138.6 58.8 43.7 -11.2 -0.9 6.6 13 13 A T - 0 0 57 1,-0.2 2,-0.2 -3,-0.1 3,-0.1 0.920 52.6-128.7 -83.1 -49.8 -7.9 -2.8 6.3 14 14 A G - 0 0 25 14,-0.1 -1,-0.2 1,-0.1 14,-0.1 -0.609 7.1-105.6 124.3 174.6 -8.7 -4.8 3.1 15 15 A T S S+ 0 0 145 -2,-0.2 2,-0.3 2,-0.1 -1,-0.1 0.723 93.7 68.5-108.7 -35.8 -8.6 -8.4 1.8 16 16 A S S S- 0 0 95 11,-0.1 11,-1.4 1,-0.1 3,-0.1 -0.654 86.7-111.7 -89.9 143.6 -5.5 -8.3 -0.4 17 17 A K B -A 26 0A 127 -2,-0.3 9,-0.2 9,-0.2 8,-0.1 -0.219 52.2 -69.1 -68.1 161.4 -2.0 -8.0 1.0 18 18 A C - 0 0 6 7,-1.4 16,-0.2 5,-0.2 5,-0.2 -0.204 44.7-120.2 -52.4 137.3 0.1 -4.8 0.4 19 19 A R S S+ 0 0 179 14,-0.7 -1,-0.1 9,-0.1 15,-0.1 0.904 93.1 86.6 -45.1 -50.9 1.2 -4.5 -3.2 20 20 A K S > S- 0 0 120 1,-0.1 3,-0.5 2,-0.1 18,-0.0 -0.188 73.6-145.2 -53.6 142.7 4.8 -4.5 -2.1 21 21 A A T 3 S+ 0 0 98 1,-0.2 2,-1.2 -4,-0.0 -1,-0.1 0.912 95.5 55.7 -77.6 -45.8 6.3 -8.0 -1.8 22 22 A G T 3 S+ 0 0 79 2,-0.0 2,-0.4 1,-0.0 -1,-0.2 -0.202 90.1 100.5 -82.9 46.7 8.5 -7.2 1.2 23 23 A C < - 0 0 19 -2,-1.2 -5,-0.2 -3,-0.5 -1,-0.0 -0.968 47.4-173.7-137.3 119.8 5.6 -6.0 3.3 24 24 A V + 0 0 118 -2,-0.4 -6,-0.1 -7,-0.1 -1,-0.1 0.885 66.3 86.0 -75.9 -41.0 3.8 -8.0 6.0 25 25 A Y S S- 0 0 140 1,-0.1 -7,-1.4 -8,-0.1 2,-0.2 0.006 85.6-104.3 -54.8 166.8 1.1 -5.4 6.5 26 26 A F B -A 17 0A 84 -9,-0.2 10,-0.4 1,-0.1 -9,-0.2 -0.564 29.2-128.3 -95.3 160.9 -2.0 -5.4 4.3 27 27 A G - 0 0 4 -11,-1.4 8,-0.3 -2,-0.2 7,-0.2 -0.509 13.6-141.7-103.6 174.0 -2.8 -3.0 1.5 28 28 A T > - 0 0 22 6,-2.3 5,-2.5 5,-0.2 -9,-0.1 -0.958 20.4-127.7-136.9 154.5 -5.8 -0.8 0.7 29 29 A P T > 5S+ 0 0 93 0, 0.0 3,-0.7 0, 0.0 5,-0.1 0.763 111.5 53.9 -69.8 -26.0 -7.8 0.2 -2.4 30 30 A E T 3 5S+ 0 0 164 1,-0.2 4,-0.1 2,-0.1 -3,-0.0 0.811 103.3 55.1 -78.1 -31.7 -7.4 3.9 -1.5 31 31 A N T > 5S- 0 0 15 3,-0.3 3,-1.0 2,-0.1 -1,-0.2 0.183 122.4-106.0 -86.4 17.6 -3.7 3.7 -1.1 32 32 A K T < 5S- 0 0 96 -3,-0.7 2,-0.4 1,-0.3 -2,-0.1 0.871 78.9 -49.3 60.7 38.1 -3.5 2.3 -4.7 33 33 A G T 3 - 0 0 2 -8,-0.3 4,-3.1 -3,-0.1 5,-0.3 -0.407 33.8 -89.9 -99.2 177.9 -0.5 -0.1 2.7 36 36 A T H > S+ 0 0 98 -10,-0.4 4,-1.2 2,-0.2 -9,-0.1 0.914 126.5 44.8 -53.1 -47.3 -0.7 2.7 5.3 37 37 A L H >> S+ 0 0 88 2,-0.2 4,-1.4 1,-0.1 3,-1.1 0.996 119.4 37.8 -61.0 -67.9 3.0 2.5 5.8 38 38 A C H 3> S+ 0 0 26 1,-0.3 4,-3.0 2,-0.2 3,-0.4 0.938 107.1 66.0 -49.1 -55.9 4.2 2.3 2.2 39 39 A F H 3X S+ 0 0 80 -4,-3.1 4,-1.0 1,-0.3 -1,-0.3 0.828 103.9 48.2 -34.6 -44.9 1.5 4.7 1.0 40 40 A I H XX S+ 0 0 99 -4,-1.2 4,-2.1 -3,-1.1 3,-0.6 0.951 112.3 46.2 -64.6 -51.2 3.3 7.3 3.1 41 41 A E H 3< S+ 0 0 111 -4,-1.4 -2,-0.2 -3,-0.4 -1,-0.2 0.917 99.7 69.9 -58.0 -45.8 6.8 6.5 1.7 42 42 A Y H 3< S+ 0 0 158 -4,-3.0 -1,-0.2 1,-0.2 -2,-0.2 0.866 109.4 35.0 -38.5 -49.4 5.5 6.4 -1.9 43 43 A S H << S+ 0 0 98 -4,-1.0 -1,-0.2 -3,-0.6 -2,-0.2 0.926 109.7 75.1 -74.2 -47.1 5.0 10.1 -1.7 44 44 A G S < S- 0 0 25 -4,-2.1 2,-0.2 -5,-0.1 0, 0.0 -0.350 94.9-100.4 -69.1 147.0 8.1 10.8 0.5 45 45 A P - 0 0 129 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.455 37.1-150.9 -69.8 134.5 11.6 10.6 -1.1 46 46 A S - 0 0 83 -2,-0.2 2,-0.3 -4,-0.1 -4,-0.0 -0.773 11.1-170.1-108.0 152.8 13.5 7.4 -0.5 47 47 A S 0 0 122 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 -0.997 360.0 360.0-144.7 136.6 17.3 6.8 -0.3 48 48 A G 0 0 135 -2,-0.3 -1,-0.2 0, 0.0 0, 0.0 0.987 360.0 360.0 71.2 360.0 19.4 3.7 -0.2