==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 30-MAR-07 2EQF . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.P.ZHANG,F.HAYAHSI,S.YOKOYAMA,RIKEN STRUCTURAL . 46 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4620.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 41.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 126 0, 0.0 2,-0.6 0, 0.0 3,-0.3 0.000 360.0 360.0 360.0 66.8 5.9 -20.0 -2.7 2 2 A S - 0 0 93 1,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.751 360.0 -35.8 -88.7 119.2 5.7 -23.0 -0.5 3 3 A S S S- 0 0 133 -2,-0.6 -1,-0.2 1,-0.1 0, 0.0 0.821 119.3 -59.5 35.7 41.6 3.9 -26.0 -2.2 4 4 A G S S- 0 0 69 -3,-0.3 2,-0.2 1,-0.1 -1,-0.1 0.934 70.2-144.6 54.3 96.5 1.7 -23.3 -3.7 5 5 A S - 0 0 96 1,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.593 11.7-117.1 -91.3 153.2 0.0 -21.3 -0.9 6 6 A S + 0 0 125 -2,-0.2 -1,-0.1 0, 0.0 -2,-0.0 -0.596 47.2 136.4 -89.2 149.7 -3.5 -20.0 -1.1 7 7 A G - 0 0 60 -2,-0.2 2,-0.0 2,-0.0 -2,-0.0 -0.823 49.8 -93.9 173.1 146.4 -4.3 -16.2 -0.9 8 8 A P - 0 0 107 0, 0.0 2,-0.4 0, 0.0 3,-0.1 -0.317 32.3-122.1 -69.7 152.1 -6.4 -13.4 -2.4 9 9 A K S S+ 0 0 205 1,-0.2 4,-0.0 -2,-0.0 -2,-0.0 -0.117 84.5 106.5 -86.4 38.1 -5.1 -11.3 -5.3 10 10 A Q + 0 0 131 -2,-0.4 11,-0.4 2,-0.0 2,-0.3 -0.245 53.6 105.3-109.9 42.9 -5.6 -8.2 -3.1 11 11 A R S S- 0 0 138 9,-0.2 9,-0.2 1,-0.2 7,-0.1 -0.898 83.8 -68.9-123.8 152.9 -1.9 -7.5 -2.3 12 12 A C - 0 0 9 7,-3.2 2,-0.6 -2,-0.3 16,-0.2 0.075 44.6-122.2 -34.6 142.7 0.6 -5.0 -3.6 13 13 A R S S+ 0 0 182 13,-0.1 -1,-0.2 -3,-0.1 15,-0.1 -0.142 79.7 106.1 -85.8 40.2 1.5 -5.5 -7.2 14 14 A A S > S- 0 0 29 -2,-0.6 3,-0.9 3,-0.4 18,-0.0 -0.943 70.9-138.3-124.0 144.0 5.2 -5.8 -6.3 15 15 A P T 3 S+ 0 0 146 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.684 108.2 40.9 -69.7 -18.5 7.4 -8.9 -6.0 16 16 A A T 3 S+ 0 0 96 1,-0.1 2,-0.3 -3,-0.0 -3,-0.1 -0.343 99.6 83.3-126.3 51.1 8.9 -7.5 -2.8 17 17 A C < + 0 0 24 -3,-0.9 -3,-0.4 -5,-0.2 -1,-0.1 -0.790 40.4 178.5-157.7 108.2 5.8 -6.2 -1.0 18 18 A D + 0 0 117 -2,-0.3 2,-0.3 -7,-0.1 -5,-0.0 -0.219 50.9 114.7-102.9 41.7 3.4 -8.2 1.1 19 19 A H S S- 0 0 95 1,-0.0 -7,-3.2 10,-0.0 2,-0.4 -0.796 76.5 -94.5-112.3 155.0 1.2 -5.2 2.0 20 20 A F - 0 0 132 -2,-0.3 -9,-0.2 -9,-0.2 -2,-0.1 -0.519 46.7-165.6 -69.6 121.6 -2.4 -4.4 1.1 21 21 A G - 0 0 8 -2,-0.4 2,-0.3 -11,-0.4 7,-0.2 0.057 5.8-137.6 -90.1-157.6 -2.5 -2.2 -2.0 22 22 A N B > > -A 27 0A 91 6,-1.1 5,-1.8 5,-0.8 3,-0.6 -0.916 20.2-122.9-168.1 139.4 -5.3 -0.1 -3.5 23 23 A A G > 5S+ 0 0 86 -2,-0.3 3,-1.8 1,-0.2 4,-0.4 0.930 111.3 59.8 -48.3 -54.5 -6.7 0.6 -7.0 24 24 A K G 3 5S+ 0 0 165 1,-0.3 2,-0.6 2,-0.2 -1,-0.2 0.878 103.4 52.3 -41.8 -48.4 -6.2 4.4 -6.5 25 25 A C G X 5S- 0 0 8 -3,-0.6 3,-1.1 3,-0.3 -1,-0.3 -0.120 131.0 -96.5 -83.8 39.1 -2.5 3.7 -6.1 26 26 A N T < 5S- 0 0 95 -3,-1.8 2,-0.8 -2,-0.6 -3,-0.2 0.862 77.8 -59.6 48.8 39.8 -2.5 1.7 -9.3 27 27 A G B 3 - 0 0 3 -8,-0.2 4,-3.1 -3,-0.1 3,-0.3 -0.669 33.2-104.1 -96.3 151.1 0.5 0.4 -1.8 30 30 A N H > S+ 0 0 91 -2,-0.3 4,-3.3 1,-0.2 5,-0.3 0.856 122.1 55.7 -35.0 -52.0 0.9 4.1 -0.8 31 31 A E H > S+ 0 0 106 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.954 114.5 36.2 -48.1 -62.7 4.5 3.3 0.1 32 32 A C H > S+ 0 0 36 -3,-0.3 4,-3.2 1,-0.2 -2,-0.2 0.940 115.2 56.4 -57.8 -50.5 5.4 1.9 -3.3 33 33 A F H X S+ 0 0 72 -4,-3.1 4,-1.0 1,-0.2 -1,-0.2 0.920 111.8 42.9 -47.5 -52.4 3.1 4.5 -5.1 34 34 A Q H >< S+ 0 0 117 -4,-3.3 3,-1.5 -5,-0.3 -2,-0.2 0.980 113.8 49.1 -59.3 -60.9 5.0 7.4 -3.4 35 35 A F H 3< S+ 0 0 176 -4,-2.5 -2,-0.2 1,-0.3 -1,-0.2 0.911 98.7 68.7 -44.6 -53.3 8.5 5.9 -3.9 36 36 A K H 3< S+ 0 0 126 -4,-3.2 -1,-0.3 -5,-0.2 -2,-0.2 0.835 78.8 103.8 -34.5 -46.9 7.8 5.3 -7.6 37 37 A Q S << S- 0 0 106 -3,-1.5 2,-0.5 -4,-1.0 -3,-0.0 0.020 94.8 -89.4 -39.6 144.7 7.7 9.1 -8.0 38 38 A M - 0 0 166 1,-0.1 2,-0.5 2,-0.1 3,-0.4 -0.477 43.3-120.8 -65.3 114.3 10.9 10.4 -9.6 39 39 A Y S S+ 0 0 238 -2,-0.5 -1,-0.1 1,-0.2 -4,-0.0 -0.408 97.4 30.3 -60.2 108.4 13.3 11.2 -6.8 40 40 A G + 0 0 71 -2,-0.5 -1,-0.2 1,-0.0 -2,-0.1 0.793 64.9 151.2 108.1 46.8 14.1 14.9 -7.2 41 41 A S + 0 0 102 -3,-0.4 -2,-0.1 4,-0.0 4,-0.1 -0.215 25.1 159.4-100.2 41.9 10.9 16.4 -8.6 42 42 A G - 0 0 51 2,-0.1 -3,-0.0 1,-0.1 0, 0.0 -0.038 54.2-110.8 -59.7 166.9 11.5 19.8 -7.0 43 43 A P S S+ 0 0 143 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.810 101.2 53.4 -69.7 -31.3 9.9 23.0 -8.3 44 44 A S + 0 0 100 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 -0.731 63.2 161.8-106.6 156.1 13.2 24.4 -9.5 45 45 A S 0 0 129 -2,-0.3 -4,-0.0 -4,-0.1 0, 0.0 -0.920 360.0 360.0-170.7 143.6 15.7 22.8 -11.8 46 46 A G 0 0 123 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.054 360.0 360.0-135.2 360.0 18.7 23.7 -14.0