==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 25-OCT-05 2ERR . COMPND 2 MOLECULE: ATAXIN-2-BINDING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.H.ALLAIN,S.D.AUWETER . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6463.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 17.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 109 A N 0 0 191 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 146.2 -3.0 33.4 -11.9 2 110 A T + 0 0 152 1,-0.0 2,-0.3 0, 0.0 0, 0.0 0.322 360.0 69.9-131.1 1.3 -0.1 31.5 -10.3 3 111 A E S S- 0 0 123 4,-0.0 2,-0.8 0, 0.0 -1,-0.0 -0.929 79.6-110.7-131.8 148.9 -1.8 28.3 -8.9 4 112 A N > - 0 0 99 -2,-0.3 3,-1.2 1,-0.1 0, 0.0 -0.679 23.7-162.5 -77.8 105.5 -3.4 25.0 -10.2 5 113 A K T 3 S+ 0 0 205 -2,-0.8 -1,-0.1 1,-0.2 0, 0.0 0.577 88.7 41.0 -62.8 -12.5 -7.2 25.3 -9.5 6 114 A S T 3 S+ 0 0 65 52,-0.0 52,-0.3 2,-0.0 -1,-0.2 0.136 79.1 158.6-126.3 12.8 -7.7 21.5 -10.0 7 115 A Q < - 0 0 110 -3,-1.2 48,-0.1 50,-0.1 49,-0.1 -0.182 38.1-121.8 -52.2 124.6 -4.5 20.0 -8.2 8 116 A P + 0 0 28 0, 0.0 2,-0.2 0, 0.0 49,-0.2 -0.072 32.7 173.3 -52.4 164.0 -4.8 16.2 -7.1 9 117 A K - 0 0 77 47,-0.4 47,-2.5 44,-0.1 46,-2.1 -0.866 36.8 -38.7-173.9-179.8 -4.3 15.1 -3.4 10 118 A R E -A 54 0A 99 44,-0.3 73,-0.5 -2,-0.2 2,-0.3 -0.131 36.3-169.5-104.6 163.9 -4.7 11.8 -1.6 11 119 A L E -AB 53 82A 0 42,-2.2 42,-1.8 71,-0.1 2,-0.3 -0.991 22.7-126.5-146.3 120.2 -7.0 8.8 -1.6 12 120 A H E -AB 52 81A 41 69,-1.8 69,-0.9 -2,-0.3 2,-0.5 -0.651 22.1-167.5 -85.3 134.9 -7.4 5.8 0.8 13 121 A V E -AB 51 80A 0 38,-3.0 38,-2.3 -2,-0.3 3,-0.3 -0.883 17.3-179.8-136.5 90.6 -7.2 2.3 -1.0 14 122 A S E +AB 50 79A 27 65,-2.9 65,-2.5 -2,-0.5 36,-0.2 -0.409 47.2 27.4-104.1 170.0 -8.3 -0.6 1.1 15 123 A N S S+ 0 0 76 34,-0.5 35,-0.2 63,-0.2 -1,-0.2 0.600 76.9 160.8 59.5 18.4 -8.9 -4.4 1.2 16 124 A I - 0 0 6 33,-1.4 -1,-0.2 -3,-0.3 2,-0.1 -0.271 51.3 -87.3 -66.4 150.7 -6.1 -4.8 -1.4 17 125 A P > - 0 0 4 0, 0.0 3,-2.6 0, 0.0 -1,-0.1 -0.400 36.2-123.3 -55.1 130.4 -4.3 -8.2 -2.0 18 126 A F T 3 S+ 0 0 129 1,-0.3 29,-1.2 -2,-0.1 30,-0.1 0.495 108.4 68.3 -57.3 -6.7 -1.3 -8.5 0.5 19 127 A R T 3 S+ 0 0 216 27,-0.1 -1,-0.3 28,-0.1 27,-0.0 0.494 80.3 113.3 -87.8 -7.9 1.0 -9.1 -2.6 20 128 A F < - 0 0 14 -3,-2.6 2,-0.3 4,-0.1 27,-0.2 -0.142 44.1-173.9 -59.9 159.3 0.4 -5.5 -3.8 21 129 A R > - 0 0 151 1,-0.1 4,-2.3 25,-0.0 5,-0.2 -0.885 42.4 -92.9-139.6 173.7 3.1 -2.7 -3.9 22 130 A D H > S+ 0 0 54 -2,-0.3 4,-2.5 2,-0.2 5,-0.2 0.958 125.1 47.4 -50.8 -60.7 3.4 1.0 -4.6 23 131 A P H > S+ 0 0 65 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.856 108.7 57.3 -56.1 -36.0 4.3 0.5 -8.4 24 132 A D H > S+ 0 0 70 2,-0.2 4,-2.2 1,-0.2 6,-0.2 0.958 110.6 41.7 -60.5 -50.2 1.3 -1.9 -8.6 25 133 A L H X>S+ 0 0 0 -4,-2.3 4,-3.1 2,-0.2 5,-0.5 0.928 113.0 53.2 -63.4 -42.5 -1.2 0.8 -7.4 26 134 A R H <5S+ 0 0 158 -4,-2.5 4,-0.2 1,-0.2 9,-0.2 0.868 115.7 40.6 -64.1 -33.8 0.4 3.6 -9.5 27 135 A Q H X5S+ 0 0 152 -4,-2.2 4,-0.7 -5,-0.2 -1,-0.2 0.850 117.0 48.3 -75.0 -37.6 0.1 1.4 -12.7 28 136 A M H ><5S+ 0 0 29 -4,-2.2 3,-0.7 2,-0.3 4,-0.2 0.930 120.0 36.3 -78.2 -45.2 -3.4 0.1 -11.8 29 137 A F G >X5S+ 0 0 0 -4,-3.1 3,-2.2 -5,-0.2 4,-2.0 0.774 106.5 78.1 -60.6 -29.6 -4.7 3.5 -11.0 30 138 A G G 34 -D 46 0B 96 3,-2.8 3,-1.0 1,-0.0 -1,-0.1 -0.864 43.9 -95.0-131.0 172.4 4.2 -4.3 7.5 44 152 A E T 3 S+ 0 0 193 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 0.783 125.9 49.2 -59.3 -28.3 7.0 -6.9 7.6 45 153 A R T 3 S- 0 0 223 1,-0.2 2,-0.3 0, 0.0 -1,-0.3 0.719 125.7 -72.6 -78.9 -27.4 4.5 -9.6 6.4 46 154 A G B < S-D 43 0B 14 -3,-1.0 -3,-2.8 -27,-0.0 2,-0.5 -0.980 84.5 -15.0 151.7-164.4 3.1 -7.6 3.4 47 155 A S > - 0 0 0 -29,-1.2 3,-0.9 -2,-0.3 -6,-0.6 0.309 68.2-127.2 -59.4 1.5 0.9 -4.6 2.4 48 156 A K T 3 - 0 0 110 -2,-0.5 -1,-0.2 1,-0.2 3,-0.1 0.190 60.1 -82.8 56.3 -9.2 -0.9 -4.1 5.8 49 157 A G T 3 S+ 0 0 13 1,-0.2 -33,-1.4 -32,-0.1 -34,-0.5 0.198 106.3 53.4 107.7 -7.2 -4.1 -4.4 3.6 50 158 A F E < -A 14 0A 59 -3,-0.9 -9,-2.2 -36,-0.2 -8,-0.4 -0.970 53.2-169.2-144.6 162.4 -4.3 -0.8 2.4 51 159 A G E -AC 13 40A 0 -38,-2.3 -38,-3.0 -2,-0.3 2,-0.3 -0.857 18.1-130.0-132.7 175.5 -2.4 2.0 0.6 52 160 A F E -AC 12 39A 31 -13,-1.5 -13,-2.7 -2,-0.3 2,-0.3 -0.913 21.7-173.7-119.2 151.2 -2.8 5.7 -0.1 53 161 A V E -AC 11 38A 0 -42,-1.8 -42,-2.2 -2,-0.3 2,-0.7 -0.969 27.3-122.6-147.0 156.6 -2.4 7.4 -3.6 54 162 A T E S+A 10 0A 24 -17,-2.7 -18,-2.7 -2,-0.3 -17,-0.4 -0.872 71.8 102.7-115.5 98.4 -2.3 11.0 -4.7 55 163 A F + 0 0 1 -46,-2.1 2,-0.7 -2,-0.7 3,-0.2 0.548 37.7 110.0-154.5 -34.3 -5.0 11.3 -7.2 56 164 A E + 0 0 18 -47,-2.5 -47,-0.4 -3,-0.3 -1,-0.1 -0.722 38.7 83.7 -94.4 109.7 -8.3 12.9 -6.2 57 165 A N + 0 0 88 -2,-0.7 -1,-0.2 1,-0.3 -50,-0.1 0.058 69.6 63.3-146.8 -52.3 -9.7 16.2 -7.3 58 166 A S S > S- 0 0 54 -52,-0.3 4,-2.1 -3,-0.2 3,-0.4 -0.106 85.3-103.7 -68.6 166.9 -11.6 16.3 -10.7 59 167 A A H > S+ 0 0 84 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.829 123.0 57.3 -59.3 -32.8 -14.8 14.5 -11.7 60 168 A D H > S+ 0 0 40 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.876 106.8 48.1 -67.0 -35.0 -12.7 12.0 -13.8 61 169 A A H > S+ 0 0 1 -3,-0.4 4,-2.6 2,-0.2 -2,-0.2 0.867 112.1 49.5 -71.1 -36.7 -10.8 11.1 -10.5 62 170 A D H X S+ 0 0 72 -4,-2.1 4,-2.8 2,-0.2 5,-0.2 0.984 113.1 46.6 -58.2 -57.1 -14.2 10.8 -8.7 63 171 A R H X S+ 0 0 144 -4,-2.9 4,-1.5 1,-0.2 -2,-0.2 0.880 111.8 52.0 -49.5 -47.4 -15.4 8.5 -11.6 64 172 A A H X S+ 0 0 0 -4,-2.4 4,-2.6 2,-0.2 3,-0.4 0.940 109.7 47.7 -59.6 -50.4 -12.1 6.6 -11.4 65 173 A R H X S+ 0 0 28 -4,-2.6 4,-2.8 1,-0.2 15,-0.3 0.967 111.0 51.9 -47.9 -57.5 -12.5 6.0 -7.6 66 174 A E H < S+ 0 0 119 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.737 112.5 46.9 -59.1 -25.2 -16.1 4.9 -8.2 67 175 A K H < S+ 0 0 125 -4,-1.5 -1,-0.2 -3,-0.4 -2,-0.2 0.909 116.5 40.4 -78.1 -49.9 -14.8 2.4 -10.8 68 176 A L H >< S+ 0 0 0 -4,-2.6 3,-2.0 2,-0.1 2,-1.3 0.743 93.2 90.4 -77.5 -20.8 -11.8 0.9 -8.8 69 177 A H T 3< S+ 0 0 63 -4,-2.8 10,-0.2 1,-0.3 -1,-0.1 -0.624 106.7 16.7 -71.9 87.7 -14.0 0.8 -5.6 70 178 A G T 3 S+ 0 0 36 8,-2.4 2,-0.4 -2,-1.3 -1,-0.3 0.333 90.9 145.3 112.2 1.7 -15.3 -2.7 -6.3 71 179 A T < - 0 0 36 -3,-2.0 7,-2.2 7,-0.3 2,-0.6 -0.614 45.1-138.9 -67.8 119.1 -12.6 -3.7 -8.9 72 180 A V E +E 77 0C 91 -2,-0.4 2,-0.3 5,-0.2 5,-0.2 -0.783 32.8 164.7 -85.3 114.1 -11.8 -7.4 -8.4 73 181 A V E > S-E 76 0C 37 3,-2.7 3,-0.7 -2,-0.6 -2,-0.0 -0.984 70.0 -0.7-133.1 137.2 -8.0 -8.0 -8.7 74 182 A E T 3 S- 0 0 150 -2,-0.3 3,-0.1 1,-0.2 -1,-0.1 0.723 134.9 -57.1 50.6 24.4 -6.3 -11.3 -7.6 75 183 A G T 3 S+ 0 0 60 1,-0.2 2,-0.3 -58,-0.0 -1,-0.2 0.881 119.0 108.1 74.4 40.3 -9.8 -12.4 -6.5 76 184 A R E < -E 73 0C 103 -3,-0.7 -3,-2.7 -59,-0.0 2,-0.6 -0.971 66.5-128.4-149.5 130.9 -10.3 -9.3 -4.2 77 185 A K E -E 72 0C 124 -2,-0.3 -5,-0.2 -5,-0.2 2,-0.2 -0.721 22.1-142.2 -78.8 120.0 -12.3 -6.1 -4.3 78 186 A I - 0 0 0 -7,-2.2 -8,-2.4 -2,-0.6 2,-0.5 -0.556 8.8-149.8 -67.5 145.7 -10.3 -2.9 -3.7 79 187 A E E -B 14 0A 92 -65,-2.5 -65,-2.9 -10,-0.2 2,-1.1 -0.906 11.1-168.6-119.7 96.9 -12.2 -0.3 -1.6 80 188 A V E +B 13 0A 0 -2,-0.5 -67,-0.2 -15,-0.3 2,-0.2 -0.691 12.2 178.0 -96.0 90.9 -11.1 3.3 -2.6 81 189 A N E -B 12 0A 59 -2,-1.1 -69,-1.8 -69,-0.9 -2,-0.0 -0.601 33.7-108.4 -83.6 151.0 -12.5 5.7 -0.0 82 190 A N E -B 11 0A 109 -2,-0.2 2,-0.3 -71,-0.2 -71,-0.1 -0.234 51.7-110.8 -62.2 168.7 -11.9 9.5 -0.0 83 191 A A - 0 0 30 -73,-0.5 2,-0.1 2,-0.0 -1,-0.1 -0.846 18.6-146.2-125.4 148.4 -9.5 10.6 2.8 84 192 A T - 0 0 69 -2,-0.3 4,-0.1 2,-0.1 3,-0.1 -0.389 36.5-126.7 -67.5 166.8 -8.8 12.4 6.1 85 193 A A - 0 0 89 2,-0.5 2,-0.2 -2,-0.1 3,-0.0 -0.430 65.4 -72.1-156.6 80.5 -5.2 14.0 6.1 86 194 A R S S+ 0 0 219 -2,-0.0 -2,-0.1 0, 0.0 2,-0.1 -0.903 112.4 67.9-116.4 -18.7 -4.4 12.6 8.8 87 195 A V 0 0 141 -2,-0.2 -2,-0.5 1,-0.1 0, 0.0 -0.344 360.0 360.0 -64.8 143.2 -6.0 13.7 12.1 88 196 A M 0 0 218 -4,-0.1 -1,-0.1 -2,-0.1 0, 0.0 0.487 360.0 360.0-143.4 360.0 -9.8 13.0 12.6