==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 25-OCT-05 2ES2 . COMPND 2 MOLECULE: 5'-D(*TP*TP*TP*TP*TP*T)-3'; . SOURCE 2 SYNTHETIC: YES; . AUTHOR K.E.A.MAX,M.BIENERT,U.HEINEMANN . 67 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4531.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 58.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 6.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 38.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 122 0, 0.0 2,-0.3 0, 0.0 49,-0.2 0.000 360.0 360.0 360.0 146.2 6.9 7.6 21.9 2 2 A L E -A 49 0A 75 47,-3.3 47,-2.1 18,-0.0 2,-0.4 -0.662 360.0-136.9 -88.7 152.9 5.2 4.8 20.0 3 3 A E E +A 48 0A 135 -2,-0.3 2,-0.3 45,-0.2 45,-0.2 -0.926 38.5 139.6-111.5 132.9 7.3 1.9 18.8 4 4 A G E -A 47 0A 11 43,-2.4 43,-2.7 -2,-0.4 2,-0.3 -0.851 41.9-112.8-153.7-171.7 6.9 0.5 15.3 5 5 A K E -AB 46 19A 46 14,-2.2 14,-3.2 -2,-0.3 2,-0.4 -0.979 37.1-100.9-137.6 144.2 8.7 -0.9 12.3 6 6 A V E - B 0 18A 2 39,-2.4 38,-2.8 -2,-0.3 12,-0.3 -0.541 35.7-179.3 -70.4 119.5 9.0 0.6 8.8 7 7 A K E + 0 0 71 10,-3.4 2,-0.3 1,-0.4 11,-0.2 0.876 69.6 0.3 -81.8 -47.3 6.5 -1.3 6.6 8 8 A W E + B 0 17A 157 9,-1.9 9,-3.0 34,-0.1 -1,-0.4 -0.989 60.2 178.7-142.2 140.8 7.4 0.5 3.4 9 9 A F E - B 0 16A 10 -2,-0.3 2,-1.1 7,-0.3 7,-0.3 -0.958 22.4-144.2-144.5 127.9 9.8 3.2 2.5 10 10 A N E >> - B 0 15A 52 5,-3.4 4,-1.9 -2,-0.3 5,-0.8 -0.792 13.2-165.4 -88.3 102.1 10.3 4.6 -0.9 11 11 A S T 45S+ 0 0 83 -2,-1.1 -1,-0.2 1,-0.2 5,-0.0 0.798 84.7 47.4 -58.4 -35.5 13.9 5.2 -0.9 12 12 A E T 45S+ 0 0 159 1,-0.1 -1,-0.2 -3,-0.1 -2,-0.1 0.895 119.5 33.1 -72.8 -50.7 13.6 7.5 -4.0 13 13 A K T 45S- 0 0 132 2,-0.2 -2,-0.2 17,-0.0 17,-0.2 0.483 102.7-120.9 -93.4 -7.1 10.7 9.7 -3.1 14 14 A G T <5S+ 0 0 8 -4,-1.9 16,-3.0 1,-0.2 2,-0.3 0.868 71.9 95.9 74.3 37.7 11.3 10.0 0.7 15 15 A F E < +BC 10 29A 69 -5,-0.8 -5,-3.4 14,-0.3 2,-0.3 -0.991 34.3 136.8-150.0 160.6 8.1 8.6 2.2 16 16 A G E -BC 9 28A 1 12,-2.6 12,-2.5 -2,-0.3 2,-0.4 -0.841 41.9 -78.4-170.0-155.7 6.7 5.4 3.5 17 17 A F E -BC 8 27A 72 -9,-3.0 -10,-3.4 -2,-0.3 -9,-1.9 -0.999 20.7-150.0-137.1 136.1 4.6 3.7 6.1 18 18 A I E -BC 6 26A 0 8,-3.3 8,-2.8 -2,-0.4 2,-0.4 -0.880 17.6-145.4-103.9 128.4 5.3 2.6 9.7 19 19 A E E -B 5 0A 90 -14,-3.2 -14,-2.2 -2,-0.5 2,-0.5 -0.813 12.1-170.0 -97.4 142.4 3.4 -0.4 11.0 20 20 A V > - 0 0 20 -2,-0.4 3,-2.2 3,-0.4 -16,-0.1 -0.990 35.4-105.5-134.2 117.6 2.3 -0.6 14.6 21 21 A E T 3 S+ 0 0 103 -2,-0.5 3,-0.1 1,-0.3 -2,-0.0 -0.163 103.2 1.8 -49.2 124.8 1.0 -4.0 15.8 22 22 A G T 3 S+ 0 0 81 1,-0.2 2,-0.3 0, 0.0 -1,-0.3 0.614 118.9 88.8 69.9 16.7 -2.8 -3.7 16.2 23 23 A Q S < S- 0 0 134 -3,-2.2 -3,-0.4 3,-0.0 -1,-0.2 -0.862 85.7 -85.2-133.5 166.5 -3.0 -0.2 14.9 24 24 A D - 0 0 139 -2,-0.3 -6,-0.1 1,-0.1 0, 0.0 -0.451 53.4 -96.8 -68.2 145.5 -3.3 1.5 11.6 25 25 A D - 0 0 69 -2,-0.1 2,-0.5 -6,-0.1 -6,-0.2 -0.275 38.7-136.0 -57.6 150.2 -0.2 2.1 9.5 26 26 A V E -C 18 0A 13 -8,-2.8 -8,-3.3 -3,-0.1 2,-0.2 -0.969 10.4-124.9-120.4 131.7 1.2 5.5 9.9 27 27 A F E -Cd 17 59A 54 31,-0.5 33,-3.3 -2,-0.5 2,-0.4 -0.438 26.8-167.6 -74.3 130.9 2.4 7.7 7.1 28 28 A V E -C 16 0A 0 -12,-2.5 -12,-2.6 31,-0.2 2,-0.3 -0.987 7.2-164.7-124.8 126.0 6.0 8.9 7.3 29 29 A H E > -C 15 0A 60 -2,-0.4 3,-2.5 31,-0.4 4,-0.4 -0.827 35.0-112.5-101.7 156.3 7.7 11.6 5.2 30 30 A F G > S+ 0 0 90 -16,-3.0 3,-1.6 -2,-0.3 -15,-0.1 0.802 112.5 68.2 -59.1 -26.2 11.5 12.0 5.1 31 31 A S G 3 S+ 0 0 77 -17,-0.3 -1,-0.3 1,-0.3 -16,-0.1 0.717 92.4 60.0 -70.7 -17.0 11.2 15.3 6.8 32 32 A A G < S+ 0 0 15 -3,-2.5 31,-2.2 29,-0.1 -1,-0.3 0.654 82.4 103.9 -80.3 -17.6 10.0 13.6 10.0 33 33 A I B < -f 63 0B 3 -3,-1.6 31,-0.2 -4,-0.4 2,-0.2 -0.475 67.4-135.8 -76.5 133.2 13.2 11.6 10.3 34 34 A Q + 0 0 87 29,-2.7 31,-0.2 -2,-0.2 2,-0.1 -0.490 56.1 55.9 -88.0 154.6 15.7 12.8 12.9 35 35 A G S S- 0 0 53 -2,-0.2 2,-0.1 4,-0.1 4,-0.0 -0.303 80.4 -60.7 113.4 170.9 19.4 13.1 12.4 36 36 A E S S+ 0 0 130 -2,-0.1 2,-0.0 2,-0.0 -2,-0.0 -0.399 88.0 7.4 -88.8 159.6 21.9 14.7 10.1 37 37 A G S S+ 0 0 66 -2,-0.1 2,-0.2 2,-0.1 0, 0.0 -0.253 111.1 5.8 75.9-156.8 22.3 14.3 6.3 38 38 A F S S- 0 0 168 1,-0.1 2,-0.6 -2,-0.0 -2,-0.0 -0.426 73.0-139.4 -67.7 131.4 20.1 12.4 3.9 39 39 A K + 0 0 57 -2,-0.2 2,-0.3 -6,-0.0 -9,-0.1 -0.850 39.8 135.3-103.0 121.6 17.0 11.1 5.7 40 40 A T - 0 0 23 -2,-0.6 2,-0.3 -11,-0.0 -29,-0.1 -0.949 33.8-148.2-158.1 169.7 15.8 7.7 4.8 41 41 A L - 0 0 3 -2,-0.3 2,-0.4 -26,-0.1 -27,-0.1 -0.987 11.0-141.8-141.5 143.9 14.5 4.4 6.3 42 42 A E > - 0 0 107 -2,-0.3 3,-1.9 -34,-0.1 -36,-0.3 -0.880 37.2 -95.0-108.0 149.0 14.7 0.8 5.3 43 43 A E T 3 S+ 0 0 100 -2,-0.4 -36,-0.2 1,-0.2 3,-0.1 -0.308 110.8 30.0 -56.4 137.7 11.9 -1.7 5.6 44 44 A G T 3 S+ 0 0 59 -38,-2.8 -1,-0.2 1,-0.3 2,-0.2 0.153 85.3 138.9 98.0 -15.8 12.0 -3.7 8.8 45 45 A Q < - 0 0 56 -3,-1.9 -39,-2.4 -40,-0.1 -1,-0.3 -0.429 53.4-127.5 -68.6 129.4 13.7 -0.9 10.7 46 46 A A E +A 5 0A 30 20,-0.5 20,-2.8 -41,-0.2 2,-0.3 -0.512 35.8 179.4 -72.9 136.6 12.5 -0.4 14.3 47 47 A V E -AE 4 65A 1 -43,-2.7 -43,-2.4 18,-0.3 2,-0.4 -0.969 26.5-145.6-137.8 157.1 11.5 3.2 15.0 48 48 A S E +AE 3 64A 13 16,-2.2 16,-2.8 -2,-0.3 2,-0.3 -0.942 39.1 140.8-116.9 143.7 10.2 5.4 17.8 49 49 A F E -A 2 0A 0 -47,-2.1 -47,-3.3 -2,-0.4 2,-0.3 -0.984 40.5-123.4-166.7 170.6 7.9 8.2 16.8 50 50 A E E - E 0 61A 70 11,-2.5 11,-2.5 -2,-0.3 2,-0.4 -0.840 27.6-118.1-121.5 167.1 4.8 10.3 17.6 51 51 A I E - E 0 60A 82 -2,-0.3 2,-0.3 9,-0.2 9,-0.2 -0.896 30.5-176.7-108.2 135.0 1.6 10.9 15.6 52 52 A V E - E 0 59A 70 7,-3.0 7,-2.5 -2,-0.4 2,-0.8 -0.899 33.2-111.3-123.8 152.7 0.7 14.4 14.5 53 53 A E E - E 0 58A 140 -2,-0.3 2,-0.1 5,-0.2 -2,-0.0 -0.810 43.1-177.0 -81.6 114.1 -2.3 15.8 12.6 54 54 A G E > - E 0 57A 25 3,-2.2 3,-0.8 -2,-0.8 5,-0.0 -0.264 49.3 -79.1 -88.6-172.1 -0.8 17.0 9.3 55 55 A N T 3 S+ 0 0 154 1,-0.2 -2,-0.0 -2,-0.1 -1,-0.0 0.819 129.4 33.4 -53.0 -36.0 -2.8 18.8 6.6 56 56 A R T 3 S- 0 0 225 1,-0.4 -1,-0.2 2,-0.0 -3,-0.0 -0.373 125.6 -62.4-129.0 52.0 -4.2 15.4 5.4 57 57 A G E < S- E 0 54A 19 -3,-0.8 -3,-2.2 2,-0.0 -1,-0.4 -0.445 90.2 -17.5 101.0-176.9 -4.7 13.1 8.4 58 58 A P E + E 0 53A 74 0, 0.0 -31,-0.5 0, 0.0 2,-0.3 -0.344 61.0 177.1 -66.1 141.3 -2.2 11.6 10.9 59 59 A Q E -dE 27 52A 70 -7,-2.5 -7,-3.0 -33,-0.1 -31,-0.2 -0.967 33.0 -98.0-137.0 157.9 1.5 11.5 10.0 60 60 A A E - E 0 51A 7 -33,-3.3 -31,-0.4 -2,-0.3 2,-0.3 -0.471 39.7-174.9 -72.3 145.8 4.6 10.4 11.9 61 61 A A E + E 0 50A 19 -11,-2.5 -11,-2.5 1,-0.2 -29,-0.1 -0.967 58.6 16.8-137.1 158.8 6.7 13.0 13.6 62 62 A N E S- 0 0 72 -2,-0.3 2,-0.5 -13,-0.2 -29,-0.2 0.923 78.0-171.1 48.3 54.5 10.0 12.9 15.4 63 63 A V E -f 33 0B 0 -31,-2.2 -29,-2.7 -14,-0.1 2,-0.4 -0.674 6.7-175.5 -85.0 124.3 11.0 9.6 13.9 64 64 A T E - E 0 48A 59 -16,-2.8 -16,-2.2 -2,-0.5 2,-0.4 -0.963 25.8-122.8-124.6 133.8 14.1 7.9 15.4 65 65 A K E - E 0 47A 94 -2,-0.4 2,-0.3 -18,-0.2 -18,-0.3 -0.603 32.8-162.4 -75.7 126.5 15.8 4.7 14.2 66 66 A E 0 0 83 -20,-2.8 -20,-0.5 -2,-0.4 -1,-0.0 -0.736 360.0 360.0-109.9 156.3 16.0 2.1 17.1 67 67 A A 0 0 162 -2,-0.3 -1,-0.1 -22,-0.1 -20,-0.0 -0.301 360.0 360.0 -75.6 360.0 18.2 -1.0 17.5