==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIPID BINDING PROTEIN,TRANSFERASE 31-OCT-05 2EVB . COMPND 2 MOLECULE: METHYLMALONYL-COA DECARBOXYLASE GAMMA CHAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; . AUTHOR B.BAGAUTDINOV,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMI . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4848.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 67.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 30 40.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 73 A M 0 0 219 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 136.3 -14.7 -10.4 32.7 2 74 A V - 0 0 128 0, 0.0 2,-0.1 0, 0.0 0, 0.0 -0.985 360.0-112.9-126.0 138.0 -14.4 -9.5 29.1 3 75 A V - 0 0 101 -2,-0.4 2,-0.8 1,-0.1 0, 0.0 -0.475 33.2-121.0 -63.5 133.2 -11.9 -11.4 27.1 4 76 A S - 0 0 104 -2,-0.1 2,-0.7 2,-0.1 -1,-0.1 -0.684 26.9-157.8 -77.5 113.3 -9.2 -8.9 26.1 5 77 A E - 0 0 142 -2,-0.8 2,-2.4 2,-0.1 69,-0.1 -0.841 9.7-148.8 -95.3 115.8 -9.2 -8.9 22.3 6 78 A N + 0 0 56 -2,-0.7 67,-4.3 67,-0.4 2,-0.4 -0.403 44.4 151.4 -79.1 65.1 -5.8 -7.7 20.9 7 79 A V E -A 72 0A 43 -2,-2.4 2,-0.6 65,-0.3 65,-0.2 -0.855 41.3-149.4-108.2 133.7 -7.5 -6.3 17.8 8 80 A V E -A 71 0A 13 63,-3.7 62,-2.9 -2,-0.4 63,-1.7 -0.876 26.1-166.9 -96.2 120.7 -6.3 -3.3 15.7 9 81 A S E -A 69 0A 55 -2,-0.6 57,-0.1 60,-0.3 59,-0.1 -0.725 30.3 -84.3-110.2 160.2 -9.3 -1.6 14.2 10 82 A A - 0 0 2 58,-2.3 57,-3.2 55,-0.4 58,-0.2 -0.378 26.7-154.4 -63.0 128.5 -9.7 1.0 11.5 11 83 A P S S- 0 0 76 0, 0.0 -1,-0.2 0, 0.0 55,-0.1 0.698 79.4 -0.8 -76.3 -17.7 -9.2 4.6 12.8 12 84 A M S S- 0 0 31 53,-0.1 52,-0.1 56,-0.1 55,-0.1 -0.979 92.4 -74.3-163.2 162.4 -11.4 5.8 9.9 13 85 A P + 0 0 68 0, 0.0 2,-0.3 0, 0.0 52,-0.2 -0.280 69.5 112.5 -62.7 147.8 -13.3 4.6 6.9 14 86 A G E -C 64 0B 19 50,-2.0 50,-2.9 24,-0.1 2,-0.4 -0.991 60.5 -75.8 173.4-171.5 -11.3 3.6 3.9 15 87 A K E -CD 63 37B 99 22,-1.6 22,-2.9 -2,-0.3 2,-0.5 -0.963 38.0-122.1-119.9 130.6 -10.0 0.9 1.5 16 88 A V E + D 0 36B 0 46,-3.0 45,-3.6 -2,-0.4 20,-0.2 -0.576 30.2 177.3 -71.5 121.0 -7.3 -1.6 2.3 17 89 A L E - 0 0 29 18,-2.9 2,-0.3 -2,-0.5 -1,-0.2 0.872 62.5 -13.0 -90.2 -48.0 -4.6 -1.1 -0.3 18 90 A R E - D 0 35B 97 17,-1.0 17,-2.8 42,-0.1 2,-0.5 -0.991 55.7-129.3-156.6 152.1 -2.0 -3.7 0.9 19 91 A V E - D 0 34B 32 -2,-0.3 15,-0.3 15,-0.2 14,-0.1 -0.923 14.9-166.4-105.8 128.2 -1.3 -5.8 4.0 20 92 A L + 0 0 73 13,-2.2 2,-0.3 -2,-0.5 14,-0.2 0.449 64.1 48.9 -95.7 -2.4 2.3 -5.5 5.3 21 93 A V - 0 0 8 12,-0.8 2,-0.3 4,-0.0 12,-0.0 -0.803 63.8-141.0-132.9 173.2 2.4 -8.5 7.6 22 94 A R > - 0 0 184 -2,-0.3 3,-2.3 33,-0.0 31,-0.3 -0.910 43.1 -80.1-131.2 158.2 1.6 -12.2 7.7 23 95 A V T 3 S+ 0 0 94 -2,-0.3 31,-0.2 1,-0.3 3,-0.1 -0.373 119.8 26.6 -58.7 130.7 0.2 -14.4 10.4 24 96 A G T 3 S+ 0 0 50 29,-3.3 -1,-0.3 1,-0.3 30,-0.1 0.214 86.9 138.2 100.6 -16.1 3.0 -15.2 12.9 25 97 A D < - 0 0 51 -3,-2.3 28,-2.7 27,-0.1 -1,-0.3 -0.362 54.3-124.9 -65.9 140.1 5.1 -12.1 12.2 26 98 A R E -F 52 0C 207 26,-0.2 2,-0.3 -3,-0.1 26,-0.3 -0.662 33.7-166.0 -81.0 139.5 6.7 -10.3 15.2 27 99 A V E -F 51 0C 0 24,-3.0 24,-2.3 -2,-0.3 2,-0.3 -0.922 11.8-147.9-129.2 158.4 5.7 -6.7 15.3 28 100 A R > - 0 0 142 -2,-0.3 3,-2.3 22,-0.3 19,-0.4 -0.824 41.2 -81.9-118.7 158.1 6.9 -3.6 17.1 29 101 A V T 3 S+ 0 0 89 -2,-0.3 3,-0.1 1,-0.3 21,-0.1 -0.376 119.8 18.9 -59.1 132.3 5.0 -0.6 18.3 30 102 A G T 3 S+ 0 0 46 17,-3.1 -1,-0.3 1,-0.3 2,-0.2 0.289 89.7 139.8 90.0 -11.3 4.6 1.8 15.4 31 103 A Q < - 0 0 42 -3,-2.3 16,-1.8 16,-0.2 -1,-0.3 -0.450 60.1-109.1 -69.8 136.6 5.3 -0.9 12.8 32 104 A G E + E 0 46B 10 14,-0.2 3,-0.1 1,-0.2 -1,-0.1 -0.479 36.6 175.4 -68.4 130.7 3.1 -0.7 9.7 33 105 A L E - 0 0 0 12,-3.0 -13,-2.2 1,-0.4 -12,-0.8 0.719 65.9 -17.7-103.8 -33.9 0.5 -3.5 9.5 34 106 A L E -DE 19 45B 0 11,-0.9 11,-3.1 -15,-0.3 2,-0.5 -0.975 62.7-110.3-165.1 166.5 -1.3 -2.4 6.4 35 107 A V E -DE 18 44B 10 -17,-2.8 -18,-2.9 -2,-0.3 -17,-1.0 -0.933 27.9-165.6-111.5 127.4 -2.0 0.6 4.2 36 108 A L E -DE 16 43B 0 7,-3.5 7,-3.7 -2,-0.5 2,-0.7 -0.938 15.9-138.3-115.5 132.7 -5.4 2.2 4.2 37 109 A E E +DE 15 42B 91 -22,-2.9 -22,-1.6 -2,-0.4 2,-0.3 -0.808 48.8 131.2 -90.2 116.8 -6.6 4.7 1.6 38 110 A A E > + E 0 41B 9 3,-2.5 3,-0.8 -2,-0.7 -24,-0.1 -0.963 55.7 21.9-164.7 148.3 -8.5 7.5 3.3 39 111 A M T 3 S- 0 0 119 -2,-0.3 3,-0.1 1,-0.2 -1,-0.1 0.863 129.3 -63.7 58.0 36.9 -8.7 11.3 3.4 40 112 A K T 3 S+ 0 0 201 1,-0.2 2,-0.3 -3,-0.0 -1,-0.2 0.829 118.9 97.2 53.9 40.9 -7.1 11.2 -0.0 41 113 A M E < S-E 38 0B 106 -3,-0.8 -3,-2.5 -5,-0.1 2,-0.8 -0.966 79.0-116.3-148.8 160.4 -3.9 9.6 1.4 42 114 A E E -E 37 0B 123 -2,-0.3 2,-0.5 -5,-0.2 -5,-0.2 -0.907 40.1-164.4-102.4 106.4 -2.4 6.2 1.8 43 115 A N E -E 36 0B 36 -7,-3.7 -7,-3.5 -2,-0.8 2,-0.5 -0.832 14.8-140.7-100.9 125.0 -2.2 5.8 5.5 44 116 A E E -E 35 0B 119 -2,-0.5 -9,-0.2 -9,-0.2 -12,-0.0 -0.695 17.3-143.1 -80.8 126.6 -0.1 3.2 7.2 45 117 A I E -E 34 0B 10 -11,-3.1 -12,-3.0 -2,-0.5 -11,-0.9 -0.840 21.8-144.8 -93.2 119.8 -1.9 1.7 10.1 46 118 A P E -E 32 0B 65 0, 0.0 -14,-0.2 0, 0.0 -15,-0.1 -0.382 15.8-108.9 -84.2 159.5 0.5 1.0 13.0 47 119 A S - 0 0 1 -16,-1.8 -17,-3.1 -19,-0.4 -16,-0.2 -0.723 24.3-145.3 -82.0 132.3 0.7 -1.8 15.5 48 120 A P S S+ 0 0 91 0, 0.0 2,-0.3 0, 0.0 -19,-0.2 0.581 75.7 7.5 -76.2 -6.0 -0.2 -0.1 18.9 49 121 A R S S- 0 0 81 -21,-0.2 2,-0.2 -18,-0.1 -18,-0.1 -0.967 87.4 -80.3-160.7 173.1 2.2 -2.4 20.7 50 122 A D S S+ 0 0 103 -2,-0.3 2,-0.3 -22,-0.1 -22,-0.3 -0.515 74.0 96.9 -77.4 152.3 4.9 -5.1 20.4 51 123 A G E -F 27 0C 20 -24,-2.3 -24,-3.0 -2,-0.2 2,-0.4 -0.992 68.3 -64.0 164.5-157.1 3.6 -8.6 19.8 52 124 A V E -F 26 0C 68 -2,-0.3 22,-3.1 -26,-0.3 2,-0.5 -0.983 42.3-113.7-131.0 139.3 2.8 -11.2 17.2 53 125 A V E +B 73 0A 1 -28,-2.7 -29,-3.3 -2,-0.4 20,-0.2 -0.623 35.5 174.4 -74.2 120.4 0.3 -11.1 14.4 54 126 A K E - 0 0 98 18,-2.7 2,-0.3 -2,-0.5 19,-0.2 0.862 60.7 -1.8 -94.5 -43.2 -2.4 -13.7 15.1 55 127 A R E -B 72 0A 132 17,-1.8 17,-2.8 -32,-0.1 2,-0.6 -0.998 52.1-141.6-153.4 146.9 -4.9 -13.1 12.4 56 128 A I E -B 71 0A 51 -2,-0.3 15,-0.2 15,-0.2 -33,-0.1 -0.953 17.9-176.6-112.0 112.0 -5.5 -10.9 9.4 57 129 A L + 0 0 68 13,-2.0 2,-0.3 -2,-0.6 14,-0.2 0.505 60.9 50.3 -88.6 -8.2 -9.2 -10.0 9.2 58 130 A V - 0 0 9 12,-0.7 2,-0.3 4,-0.0 12,-0.0 -0.872 67.4-141.6-129.4 161.4 -9.3 -8.0 5.9 59 131 A K > - 0 0 155 -2,-0.3 3,-2.3 -43,-0.0 -43,-0.2 -0.856 39.4 -80.1-121.9 159.8 -8.0 -8.4 2.4 60 132 A E T 3 S+ 0 0 121 -2,-0.3 -43,-0.2 1,-0.3 3,-0.1 -0.350 119.2 25.3 -59.0 127.5 -6.4 -6.0 -0.1 61 133 A G T 3 S+ 0 0 50 -45,-3.6 -1,-0.3 1,-0.3 2,-0.2 0.219 89.2 136.7 102.0 -12.0 -9.2 -4.1 -1.8 62 134 A E < - 0 0 54 -3,-2.3 -46,-3.0 -47,-0.1 2,-0.5 -0.447 51.4-132.9 -73.8 138.2 -11.7 -4.4 1.1 63 135 A A E -C 15 0B 81 -48,-0.2 2,-0.3 -2,-0.2 -48,-0.2 -0.787 30.5-174.0 -91.1 126.7 -13.7 -1.4 2.2 64 136 A V E -C 14 0B 10 -50,-2.9 -50,-2.0 -2,-0.5 2,-0.3 -0.795 13.7-143.0-121.5 164.3 -13.7 -0.9 6.0 65 137 A D > - 0 0 97 -2,-0.3 3,-2.1 -52,-0.2 -55,-0.4 -0.756 43.0 -67.8-120.1 167.5 -15.4 1.3 8.5 66 138 A T T 3 S+ 0 0 81 1,-0.3 -1,-0.1 -2,-0.3 -54,-0.0 -0.293 120.2 12.4 -57.7 130.1 -14.3 3.0 11.7 67 139 A G T 3 S+ 0 0 44 -57,-3.2 -1,-0.3 1,-0.3 3,-0.0 0.408 89.0 144.8 84.1 -2.8 -13.7 0.5 14.5 68 140 A Q < - 0 0 58 -3,-2.1 -58,-2.3 -58,-0.2 -1,-0.3 -0.524 58.5-107.3 -72.0 131.6 -13.8 -2.4 12.2 69 141 A P E +A 9 0A 64 0, 0.0 -60,-0.3 0, 0.0 3,-0.1 -0.339 46.6 163.9 -59.6 132.9 -11.3 -5.2 13.2 70 142 A L E + 0 0 1 -62,-2.9 -13,-2.0 1,-0.4 -12,-0.7 0.737 62.6 9.1-116.4 -47.2 -8.3 -5.3 10.8 71 143 A I E -AB 8 56A 1 -63,-1.7 -63,-3.7 -15,-0.2 2,-0.4 -0.998 60.5-148.9-140.0 137.6 -5.6 -7.3 12.6 72 144 A E E -AB 7 55A 27 -17,-2.8 -18,-2.7 -2,-0.3 -17,-1.8 -0.922 15.0-150.8-108.8 135.1 -5.6 -9.4 15.7 73 145 A L E B 0 53A 3 -67,-4.3 -67,-0.4 -2,-0.4 -20,-0.2 -0.731 360.0 360.0-101.2 154.4 -2.4 -9.6 17.8 74 146 A G 0 0 79 -22,-3.1 -22,-0.2 -2,-0.3 -1,-0.1 -0.142 360.0 360.0 -81.6 360.0 -1.5 -12.6 19.9