==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 07-NOV-05 2EWT . COMPND 2 MOLECULE: PUTATIVE DNA-BINDING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR; . AUTHOR I.K.KIM,C.J.LEE,M.K.KIM,J.M.KIM,J.H.KIM,H.S.YIM,S.S.CHA,S.O. . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4319.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 71.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 50.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 138 0, 0.0 48,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 153.1 -3.0 -31.2 27.7 2 2 A S > - 0 0 73 1,-0.1 4,-2.8 4,-0.0 5,-0.2 -0.266 360.0-116.4 -63.4 152.6 0.3 -31.2 25.8 3 3 A S H > S+ 0 0 109 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.901 116.8 50.6 -55.9 -43.8 3.5 -31.7 27.9 4 4 A E H > S+ 0 0 120 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.914 111.4 47.0 -63.4 -43.9 4.7 -28.2 27.0 5 5 A Y H > S+ 0 0 86 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.943 114.2 47.0 -64.1 -46.2 1.4 -26.6 27.9 6 6 A A H X S+ 0 0 21 -4,-2.8 4,-2.2 1,-0.2 -2,-0.2 0.897 113.4 49.6 -60.8 -41.5 1.2 -28.5 31.2 7 7 A K H X S+ 0 0 44 -4,-2.6 4,-1.8 -5,-0.2 -1,-0.2 0.912 113.8 44.6 -64.4 -44.3 4.9 -27.6 31.9 8 8 A Q H X S+ 0 0 76 -4,-2.5 4,-1.8 2,-0.2 -2,-0.2 0.859 112.3 51.3 -69.8 -36.8 4.3 -23.9 31.2 9 9 A L H X S+ 0 0 5 -4,-2.7 4,-2.0 -5,-0.2 -2,-0.2 0.920 111.0 49.4 -65.6 -42.8 1.1 -23.7 33.2 10 10 A G H X S+ 0 0 0 -4,-2.2 4,-2.3 -5,-0.2 -2,-0.2 0.876 107.3 55.0 -63.3 -37.8 2.9 -25.3 36.1 11 11 A A H X S+ 0 0 49 -4,-1.8 4,-2.6 1,-0.2 -1,-0.2 0.883 108.7 47.1 -63.6 -40.2 5.7 -22.9 35.8 12 12 A K H X S+ 0 0 77 -4,-1.8 4,-2.7 57,-0.2 5,-0.2 0.869 110.0 53.4 -70.5 -34.9 3.3 -19.9 36.1 13 13 A L H X S+ 0 0 3 -4,-2.0 4,-1.8 56,-0.2 -2,-0.2 0.911 112.3 45.4 -63.8 -41.0 1.6 -21.5 39.1 14 14 A R H X S+ 0 0 90 -4,-2.3 4,-2.6 2,-0.2 5,-0.3 0.920 112.3 51.1 -67.8 -43.8 5.0 -21.8 40.7 15 15 A A H X S+ 0 0 34 -4,-2.6 4,-2.9 1,-0.2 -2,-0.2 0.949 111.2 46.7 -59.3 -50.9 6.0 -18.3 39.8 16 16 A I H X S+ 0 0 11 -4,-2.7 4,-1.0 2,-0.2 -1,-0.2 0.890 113.1 50.3 -60.0 -40.5 2.8 -16.7 41.2 17 17 A R H ><>S+ 0 0 22 -4,-1.8 5,-1.7 -5,-0.2 3,-0.8 0.970 115.8 40.1 -61.1 -55.9 3.1 -18.8 44.4 18 18 A T H ><5S+ 0 0 71 -4,-2.6 3,-2.4 1,-0.2 -2,-0.2 0.857 106.0 67.3 -62.3 -37.1 6.8 -17.8 45.1 19 19 A Q H 3<5S+ 0 0 142 -4,-2.9 -1,-0.2 1,-0.3 -2,-0.2 0.801 102.5 45.7 -55.2 -32.7 6.1 -14.2 44.0 20 20 A Q T <<5S- 0 0 72 -4,-1.0 -1,-0.3 -3,-0.8 -2,-0.2 0.102 123.8-103.6 -99.7 22.7 3.9 -13.7 47.0 21 21 A G T < 5S+ 0 0 70 -3,-2.4 2,-0.4 1,-0.2 -3,-0.2 0.711 72.9 139.8 67.8 26.6 6.4 -15.3 49.4 22 22 A L < - 0 0 32 -5,-1.7 -1,-0.2 4,-0.0 2,-0.2 -0.859 36.4-157.0-106.4 134.8 4.6 -18.7 49.9 23 23 A S > - 0 0 64 -2,-0.4 4,-2.0 1,-0.1 5,-0.1 -0.472 41.3 -99.7 -92.4 173.2 6.4 -22.0 50.0 24 24 A L H > S+ 0 0 50 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.900 130.0 50.5 -62.4 -36.7 4.5 -25.2 49.2 25 25 A H H > S+ 0 0 114 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.919 107.0 54.9 -64.1 -42.2 4.2 -25.7 53.0 26 26 A G H > S+ 0 0 10 1,-0.2 4,-3.1 2,-0.2 -1,-0.2 0.864 105.8 51.7 -58.5 -38.0 2.9 -22.1 53.3 27 27 A V H X S+ 0 0 0 -4,-2.0 4,-2.2 2,-0.2 8,-0.3 0.919 109.0 49.7 -65.4 -44.3 0.2 -22.9 50.7 28 28 A E H <>S+ 0 0 63 -4,-1.9 5,-2.8 2,-0.2 6,-0.2 0.878 115.3 45.0 -62.4 -37.8 -0.9 -25.9 52.7 29 29 A E H ><5S+ 0 0 112 -4,-2.3 3,-1.8 3,-0.2 -2,-0.2 0.958 113.6 46.7 -71.3 -51.4 -1.0 -23.8 55.9 30 30 A K H 3<5S+ 0 0 123 -4,-3.1 -2,-0.2 1,-0.3 -1,-0.2 0.836 113.2 50.6 -60.7 -32.7 -2.8 -20.8 54.4 31 31 A S T ><5S- 0 0 12 -4,-2.2 3,-2.2 -5,-0.2 -1,-0.3 0.284 111.7-119.7 -89.1 10.6 -5.4 -23.0 52.7 32 32 A Q T < 5S- 0 0 175 -3,-1.8 -3,-0.2 1,-0.3 -2,-0.1 0.823 75.6 -52.5 56.1 29.9 -6.1 -24.9 55.9 33 33 A G T 3 - 0 0 100 -2,-0.8 4,-2.9 -3,-0.2 5,-0.3 -0.423 17.1-127.8 -70.7 140.8 -1.7 -30.0 49.8 37 37 A A H > S+ 0 0 22 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.869 109.3 50.9 -54.1 -42.8 2.0 -29.3 49.2 38 38 A V H > S+ 0 0 121 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.890 113.5 44.9 -65.5 -39.0 2.5 -32.6 47.4 39 39 A V H > S+ 0 0 32 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.941 114.0 47.0 -71.3 -48.1 -0.5 -32.0 45.1 40 40 A V H X S+ 0 0 4 -4,-2.9 4,-2.5 1,-0.2 -2,-0.2 0.903 111.0 54.7 -60.9 -39.1 0.4 -28.3 44.3 41 41 A G H X S+ 0 0 4 -4,-2.3 4,-1.8 -5,-0.3 -1,-0.2 0.932 106.1 50.7 -59.3 -45.1 3.9 -29.5 43.6 42 42 A S H X>S+ 0 0 12 -4,-1.8 5,-2.1 1,-0.2 6,-1.2 0.867 109.7 50.7 -62.4 -34.5 2.7 -32.0 41.1 43 43 A Y H <5S+ 0 0 9 -4,-1.9 3,-0.4 1,-0.2 -1,-0.2 0.923 109.0 52.1 -66.7 -43.4 0.7 -29.3 39.4 44 44 A E H <5S+ 0 0 4 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.809 111.6 45.1 -63.5 -31.6 3.8 -27.1 39.2 45 45 A R H <5S- 0 0 130 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.646 111.7-120.6 -85.9 -15.1 5.9 -29.8 37.6 46 46 A G T <5S+ 0 0 25 -4,-1.0 -3,-0.2 -3,-0.4 -39,-0.1 0.697 79.9 122.3 82.4 20.2 3.1 -30.7 35.2 47 47 A D < + 0 0 111 -5,-2.1 2,-0.4 -6,-0.2 -4,-0.2 0.617 69.9 44.9 -87.4 -16.6 2.9 -34.3 36.5 48 48 A R S S- 0 0 125 -6,-1.2 -2,-0.2 -9,-0.1 -1,-0.1 -0.995 93.9-105.3-132.0 136.2 -0.7 -34.0 37.5 49 49 A A - 0 0 79 -2,-0.4 2,-0.7 1,-0.1 -6,-0.1 -0.351 24.3-150.5 -63.9 131.5 -3.6 -32.5 35.4 50 50 A V - 0 0 13 -2,-0.1 -1,-0.1 -7,-0.1 2,-0.1 -0.915 16.5-148.0-103.0 113.4 -4.9 -29.1 36.5 51 51 A T > - 0 0 76 -2,-0.7 4,-2.8 1,-0.1 5,-0.2 -0.320 24.8-111.0 -76.3 164.0 -8.6 -28.8 35.6 52 52 A V H > S+ 0 0 128 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.943 120.9 51.1 -59.8 -45.5 -10.2 -25.5 34.7 53 53 A Q H > S+ 0 0 142 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.926 111.9 46.4 -57.7 -45.1 -12.2 -25.6 37.9 54 54 A R H > S+ 0 0 80 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.905 111.0 52.2 -64.9 -42.3 -9.0 -26.2 39.9 55 55 A L H X S+ 0 0 13 -4,-2.8 4,-2.4 1,-0.2 -1,-0.2 0.917 110.1 48.9 -60.5 -42.6 -7.1 -23.5 38.0 56 56 A A H X S+ 0 0 42 -4,-2.6 4,-1.9 1,-0.2 -1,-0.2 0.883 111.2 50.2 -64.0 -38.7 -9.8 -21.0 38.8 57 57 A E H X S+ 0 0 41 -4,-2.0 4,-2.1 -5,-0.2 -2,-0.2 0.893 112.2 47.0 -67.4 -39.5 -9.8 -22.0 42.5 58 58 A L H X S+ 0 0 1 -4,-2.5 4,-2.7 2,-0.2 -2,-0.2 0.875 108.6 54.9 -70.0 -37.2 -6.0 -21.6 42.7 59 59 A A H X>S+ 0 0 1 -4,-2.4 5,-2.5 2,-0.2 4,-0.8 0.929 110.5 46.2 -60.4 -45.4 -6.2 -18.2 40.9 60 60 A D H ><5S+ 0 0 128 -4,-1.9 3,-0.6 3,-0.2 -2,-0.2 0.916 111.2 52.5 -62.2 -45.3 -8.6 -17.0 43.5 61 61 A F H 3<5S+ 0 0 41 -4,-2.1 -2,-0.2 1,-0.3 -1,-0.2 0.918 113.3 42.9 -57.1 -46.8 -6.5 -18.4 46.3 62 62 A Y H 3<5S- 0 0 10 -4,-2.7 -1,-0.3 2,-0.1 -2,-0.2 0.583 111.7-123.0 -77.4 -10.1 -3.4 -16.6 45.0 63 63 A G T <<5S+ 0 0 66 -4,-0.8 -3,-0.2 -3,-0.6 -4,-0.1 0.816 70.8 117.5 73.1 31.6 -5.4 -13.5 44.4 64 64 A V S - 0 0 78 0, 0.0 3,-1.3 0, 0.0 4,-0.5 -0.414 34.2-117.8 -69.9 149.0 -6.7 -13.3 37.5 66 66 A V G >> S+ 0 0 70 1,-0.3 3,-2.1 2,-0.2 4,-0.7 0.877 112.6 67.6 -54.0 -37.5 -6.7 -16.7 35.7 67 67 A Q G >4 S+ 0 0 130 1,-0.3 3,-1.1 2,-0.2 -1,-0.3 0.842 89.9 62.2 -52.2 -37.9 -5.0 -15.0 32.7 68 68 A E G <4 S+ 0 0 98 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.721 105.8 47.0 -62.6 -20.8 -1.9 -14.5 34.8 69 69 A L G <4 S+ 0 0 0 -3,-2.1 -1,-0.2 -4,-0.5 -57,-0.2 0.532 89.0 104.0 -98.4 -8.2 -1.5 -18.3 35.1 70 70 A L << 0 0 42 -3,-1.1 -61,-0.0 -4,-0.7 -65,-0.0 -0.600 360.0 360.0 -81.9 131.2 -2.1 -19.1 31.4 71 71 A P 0 0 67 0, 0.0 -1,-0.1 0, 0.0 -62,-0.1 -0.169 360.0 360.0 -56.2 360.0 0.9 -20.1 29.2