==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALLING PROTEIN,LIGASE 10-NOV-05 2EZ5 . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE NEDD4; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR V.KANELIS,M.C.BRUCE,N.R.SKRYNNIKOV,D.ROTIN,J.D.FORMAN-KAY . 57 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4529.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 40.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 21.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 521 W G 0 0 88 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 59.5 -12.6 -5.4 6.9 2 522 W P - 0 0 119 0, 0.0 2,-2.7 0, 0.0 4,-0.1 -0.346 360.0 -9.2 -65.0 141.3 -15.9 -3.6 7.0 3 523 W L S S+ 0 0 177 3,-0.2 2,-1.9 1,-0.1 3,-0.0 -0.409 117.6 83.6 71.8 -71.8 -16.7 -1.6 10.2 4 524 W G S S- 0 0 50 -2,-2.7 -1,-0.1 2,-0.0 0, 0.0 -0.437 115.7 -57.8 -66.6 86.1 -13.7 -3.0 12.1 5 525 W S S S+ 0 0 103 -2,-1.9 0, 0.0 1,-0.1 0, 0.0 0.145 91.6 111.3 62.1 173.4 -11.1 -0.5 10.7 6 526 W G + 0 0 69 1,-0.1 -3,-0.2 -4,-0.1 2,-0.1 0.944 26.1 166.6 87.7 70.0 -10.3 -0.2 7.1 7 527 W E + 0 0 182 -5,-0.1 2,-0.3 2,-0.1 -1,-0.1 -0.362 54.8 60.5-110.8 51.0 -11.5 3.2 5.9 8 528 W E S S- 0 0 151 -2,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.942 100.3 -53.7-159.7 177.3 -9.7 3.3 2.5 9 529 W E - 0 0 117 -2,-0.3 32,-0.1 1,-0.1 -2,-0.1 -0.486 66.4-111.6 -65.4 114.1 -9.4 1.6 -0.8 10 530 W P - 0 0 101 0, 0.0 -1,-0.1 0, 0.0 6,-0.1 -0.130 34.2-107.3 -47.7 136.6 -8.6 -2.1 -0.1 11 531 W L - 0 0 64 4,-0.1 4,-0.2 1,-0.1 6,-0.1 -0.412 42.6 -98.7 -68.3 140.5 -5.0 -3.1 -1.1 12 532 W P > - 0 0 35 0, 0.0 3,-1.2 0, 0.0 -1,-0.1 0.220 54.5 -71.6 -49.0 179.2 -4.8 -5.3 -4.2 13 533 W P T 3 S+ 0 0 135 0, 0.0 2,-0.1 0, 0.0 -2,-0.1 0.800 132.0 23.0 -45.6 -40.0 -4.4 -9.1 -4.0 14 534 W R T 3 S+ 0 0 124 2,-0.0 16,-2.8 16,-0.0 17,-1.1 -0.474 104.8 95.0-131.9 63.8 -0.8 -8.9 -2.8 15 535 W W E < +A 29 0A 59 -3,-1.2 2,-0.2 14,-0.3 14,-0.2 -0.979 37.4 179.6-150.1 162.2 -0.3 -5.5 -1.2 16 536 W S E -A 28 0A 39 12,-1.6 12,-0.6 -2,-0.3 2,-0.3 -0.769 21.4-123.6-145.5-171.8 -0.4 -3.6 2.1 17 537 W M E +A 27 0A 65 -2,-0.2 2,-0.3 10,-0.2 10,-0.2 -0.931 28.4 160.6-151.4 123.6 0.2 -0.1 3.5 18 538 W Q E -A 26 0A 81 8,-0.8 8,-2.0 -2,-0.3 2,-0.3 -0.999 36.4-117.2-144.4 140.6 2.6 1.2 6.2 19 539 W V E -A 25 0A 97 -2,-0.3 6,-0.2 6,-0.2 -2,-0.0 -0.577 30.1-150.3 -79.0 136.2 3.9 4.6 7.1 20 540 W A > - 0 0 9 4,-1.8 3,-1.0 -2,-0.3 -1,-0.0 -0.554 25.9-111.6-101.5 168.5 7.7 5.1 6.8 21 541 W P T 3 S+ 0 0 123 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.751 106.8 79.9 -69.8 -23.9 10.1 7.4 8.8 22 542 W N T 3 S- 0 0 56 2,-0.2 3,-0.1 1,-0.1 27,-0.0 0.817 116.8-104.5 -52.6 -31.9 10.7 9.4 5.6 23 543 W G S < S+ 0 0 61 -3,-1.0 2,-0.3 1,-0.4 -1,-0.1 0.280 90.6 80.1 123.1 -8.1 7.4 11.1 6.4 24 544 W R S S- 0 0 127 -6,-0.0 -4,-1.8 0, 0.0 -1,-0.4 -0.900 75.7-110.5-129.6 158.6 5.1 9.5 3.8 25 545 W T E -A 19 0A 53 -2,-0.3 -6,-0.2 -6,-0.2 21,-0.2 -0.603 32.1-165.5 -87.9 147.1 3.2 6.2 3.5 26 546 W F E -A 18 0A 0 -8,-2.0 -8,-0.8 -2,-0.2 2,-0.5 -0.564 20.9-109.2-120.2-175.0 4.2 3.5 1.0 27 547 W F E -AB 17 36A 0 9,-3.5 9,-1.4 -2,-0.2 2,-0.3 -0.964 23.7-144.4-125.8 116.4 2.8 0.4 -0.6 28 548 W I E -AB 16 35A 9 -12,-0.6 -12,-1.6 -2,-0.5 2,-0.7 -0.589 11.0-141.9 -79.9 135.8 4.1 -3.1 0.3 29 549 W D E > +AB 15 34A 20 5,-2.9 5,-2.1 -2,-0.3 4,-0.3 -0.874 20.1 178.6-102.7 112.0 4.2 -5.7 -2.5 30 550 W H T 5S+ 0 0 46 -16,-2.8 -15,-0.2 -2,-0.7 -1,-0.1 0.728 76.8 70.9 -81.3 -23.5 3.3 -9.2 -1.3 31 551 W A T 5S+ 0 0 53 -17,-1.1 -1,-0.2 1,-0.2 -16,-0.1 0.878 127.1 4.0 -59.9 -38.9 3.6 -10.6 -4.9 32 552 W S T 5S- 0 0 46 -18,-0.2 -1,-0.2 -3,-0.1 -2,-0.2 0.103 106.6-108.7-133.5 19.5 7.4 -10.1 -4.7 33 553 W R T 5S+ 0 0 153 -4,-0.3 -3,-0.2 1,-0.1 2,-0.2 0.965 76.8 113.5 47.9 76.4 7.8 -8.9 -1.1 34 554 W R E < -B 29 0A 158 -5,-2.1 -5,-2.9 18,-0.1 2,-0.3 -0.742 52.6-124.1-150.0-162.9 8.7 -5.2 -1.8 35 555 W T E -B 28 0A 18 -7,-0.3 2,-0.3 -2,-0.2 -7,-0.2 -0.989 16.2-175.9-155.2 157.9 7.5 -1.7 -1.4 36 556 W T E -B 27 0A 37 -9,-1.4 -9,-3.5 -2,-0.3 14,-0.1 -0.990 32.8-129.6-155.6 157.1 6.8 1.5 -3.4 37 557 W W S S+ 0 0 61 -2,-0.3 9,-3.3 -11,-0.2 2,-0.4 0.688 91.4 74.0 -80.7 -21.4 5.7 5.1 -3.0 38 558 W I B S-C 45 0B 80 7,-0.3 7,-0.3 -11,-0.1 -11,-0.1 -0.819 84.6-122.9-100.3 133.3 2.9 4.8 -5.6 39 559 W D > - 0 0 13 5,-2.4 4,-0.6 -2,-0.4 5,-0.3 -0.463 8.9-153.3 -72.3 141.1 -0.3 2.9 -4.8 40 560 W P T 4 S+ 0 0 47 0, 0.0 -1,-0.1 0, 0.0 -29,-0.0 0.761 87.5 76.4 -84.3 -27.3 -1.2 0.0 -7.1 41 561 W R T 4 S- 0 0 69 -32,-0.1 -2,-0.0 1,-0.1 -30,-0.0 0.753 129.7 -10.5 -54.6 -24.0 -4.9 0.3 -6.4 42 562 W N T 4 S- 0 0 80 -3,-0.3 -1,-0.1 2,-0.1 -4,-0.0 0.472 94.2-108.4-139.3 -57.3 -4.8 3.3 -8.8 43 563 W G < + 0 0 40 -4,-0.6 2,-0.4 1,-0.3 -5,-0.1 0.651 69.3 124.7 121.6 34.3 -1.2 4.3 -9.6 44 564 W R - 0 0 164 -5,-0.3 -5,-2.4 -7,-0.0 -1,-0.3 -0.955 66.9 -96.2-125.5 143.1 -0.6 7.6 -7.8 45 565 W A B C 38 0B 77 -2,-0.4 -7,-0.3 -7,-0.3 -19,-0.1 -0.269 360.0 360.0 -55.7 133.7 2.1 8.6 -5.3 46 566 W S 0 0 72 -9,-3.3 -1,-0.1 -21,-0.2 -8,-0.1 0.927 360.0 360.0 -53.2 360.0 0.9 8.2 -1.7 47 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 48 227 P T 0 0 167 0, 0.0 2,-0.4 0, 0.0 -26,-0.0 0.000 360.0 360.0 360.0 -74.1 14.8 8.6 -0.2 49 228 P G + 0 0 43 1,-0.2 3,-0.2 -28,-0.0 0, 0.0 -0.774 360.0 147.8 99.0-140.1 13.4 6.1 2.3 50 229 P L - 0 0 44 -2,-0.4 2,-0.9 -26,-0.2 -1,-0.2 0.998 48.8-131.5 64.0 76.2 10.8 3.4 1.4 51 230 P P - 0 0 20 0, 0.0 5,-0.4 0, 0.0 3,-0.3 -0.424 25.8-132.6 -62.0 99.1 11.7 0.5 3.7 52 231 P S >> - 0 0 72 -2,-0.9 3,-1.9 1,-0.2 2,-0.9 -0.022 45.7 -65.6 -49.6 156.9 11.8 -2.4 1.3 53 232 P Y T 34 S+ 0 0 65 1,-0.2 -1,-0.2 2,-0.1 -18,-0.1 -0.247 127.1 56.7 -50.1 92.2 10.0 -5.6 2.4 54 233 P D T 34 S+ 0 0 133 -2,-0.9 -1,-0.2 -3,-0.3 3,-0.2 0.108 104.5 41.4 171.5 -32.9 12.2 -6.5 5.3 55 234 P E T <4 S+ 0 0 130 -3,-1.9 2,-2.1 1,-0.2 3,-0.2 0.810 101.9 64.8-101.4 -44.1 12.2 -3.5 7.7 56 235 P A S < S+ 0 0 18 -4,-0.7 -1,-0.2 -5,-0.4 -28,-0.0 -0.417 76.4 96.2 -81.2 64.5 8.6 -2.4 7.7 57 236 P L 0 0 92 -2,-2.1 -1,-0.2 -3,-0.2 -4,-0.0 -0.078 360.0 360.0-143.2 35.6 7.3 -5.6 9.3 58 237 P H 0 0 217 -3,-0.2 -2,-0.1 0, 0.0 -3,-0.0 0.882 360.0 360.0 -93.2 360.0 7.1 -4.7 13.0