==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/DNA 04-JUN-97 2EZD . COMPND 2 MOLECULE: DNA (5'-D(*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*TP*C)- . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.M.CLORE,J.R.HUTH,C.BEWLEY,A.M.GRONENBORN . 21 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2890.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 28.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 23.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A V 0 0 161 0, 0.0 4,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 62.2 -12.4 -4.4 94.0 2 4 A P + 0 0 125 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.716 360.0 64.8 -73.5 -20.5 -10.4 -7.7 93.3 3 5 A T S S- 0 0 76 2,-0.0 2,-1.8 1,-0.0 0, 0.0 -0.862 91.0-130.0-107.1 102.7 -9.7 -6.6 89.8 4 6 A P - 0 0 109 0, 0.0 2,-0.8 0, 0.0 -1,-0.0 -0.179 32.9-172.0 -49.9 81.0 -7.4 -3.5 89.7 5 7 A K - 0 0 171 -2,-1.8 -2,-0.0 -4,-0.0 0, 0.0 -0.691 7.5-154.5 -83.6 112.3 -9.6 -1.6 87.3 6 8 A R - 0 0 222 -2,-0.8 2,-0.1 1,-0.1 3,-0.1 -0.631 21.9-109.8 -85.7 144.5 -7.8 1.6 86.3 7 9 A P - 0 0 118 0, 0.0 2,-0.1 0, 0.0 -1,-0.1 -0.437 38.9 -96.1 -73.0 144.2 -9.9 4.6 85.1 8 10 A R S S+ 0 0 258 -2,-0.1 2,-0.3 2,-0.0 0, 0.0 -0.383 78.6 104.9 -59.7 127.0 -9.8 5.6 81.5 9 11 A G S S- 0 0 69 -2,-0.1 -3,-0.0 -3,-0.1 0, 0.0 -0.973 72.9 -82.9 174.3 173.4 -7.2 8.4 81.2 10 12 A R - 0 0 171 -2,-0.3 4,-0.2 1,-0.1 3,-0.1 -0.874 50.5-113.6-101.9 117.8 -3.7 9.4 80.1 11 13 A P > - 0 0 96 0, 0.0 3,-1.1 0, 0.0 2,-0.2 0.042 40.5 -94.9 -42.7 153.6 -0.9 8.6 82.7 12 14 A K T 3 S+ 0 0 211 1,-0.2 3,-0.1 0, 0.0 0, 0.0 -0.513 110.5 24.9 -75.8 142.2 0.8 11.7 84.2 13 15 A G T 3 S+ 0 0 71 1,-0.2 2,-0.9 -2,-0.2 -1,-0.2 0.614 83.9 146.0 82.0 9.7 4.1 12.7 82.5 14 16 A S < - 0 0 38 -3,-1.1 -1,-0.2 -4,-0.2 2,-0.1 -0.692 27.4-172.9 -84.1 108.1 2.9 11.1 79.3 15 17 A K - 0 0 169 -2,-0.9 2,-0.3 -3,-0.1 0, 0.0 -0.379 38.2 -77.5 -91.6 175.9 4.3 13.2 76.4 16 18 A N - 0 0 130 1,-0.1 -1,-0.1 -2,-0.1 3,-0.1 -0.556 33.3-149.2 -75.4 133.7 3.5 12.7 72.7 17 19 A K - 0 0 209 -2,-0.3 2,-0.3 1,-0.1 -1,-0.1 0.533 67.5 -44.1 -82.2 -3.2 5.5 9.8 71.2 18 20 A G S S- 0 0 53 2,-0.0 2,-1.1 0, 0.0 -1,-0.1 -0.977 97.1 -20.5 170.8-157.7 5.6 11.4 67.8 19 21 A A - 0 0 90 -2,-0.3 2,-1.1 -3,-0.1 -2,-0.0 -0.651 54.9-154.0 -81.4 102.5 3.6 13.3 65.1 20 22 A A 0 0 102 -2,-1.1 -1,-0.0 1,-0.2 -4,-0.0 -0.621 360.0 360.0 -78.0 103.3 -0.0 12.6 65.9 21 23 A K 0 0 241 -2,-1.1 -1,-0.2 0, 0.0 -2,-0.0 0.264 360.0 360.0 -87.8 360.0 -1.7 13.0 62.4