==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/DNA 04-JUN-97 2EZE . COMPND 2 MOLECULE: DNA (5'-D(*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*TP*C)- . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.M.CLORE,J.R.HUTH,C.BEWLEY,A.M.GRONENBORN . 25 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3576.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 2 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A V 0 0 181 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -33.1 -3.2 -4.4 93.6 2 4 A P + 0 0 123 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.976 360.0 24.7 -68.0 -78.3 -4.7 -1.2 95.2 3 5 A T S S- 0 0 87 1,-0.1 3,-0.1 0, 0.0 0, 0.0 -0.675 74.1-147.0 -88.0 144.0 -7.5 -0.2 92.9 4 6 A P S S+ 0 0 104 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.989 80.9 28.3 -70.5 -80.4 -9.1 -3.1 90.8 5 7 A K S S- 0 0 181 1,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.705 84.1-133.5 -86.3 133.9 -10.2 -1.5 87.4 6 8 A R - 0 0 191 -2,-0.4 -1,-0.0 1,-0.1 2,-0.0 -0.614 24.3-112.0 -85.0 147.7 -8.1 1.5 86.4 7 9 A P - 0 0 121 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.277 35.3 -97.4 -73.2 163.5 -10.0 4.6 85.2 8 10 A R S S+ 0 0 251 2,-0.0 2,-0.3 -2,-0.0 0, 0.0 -0.644 75.0 91.8 -82.5 135.2 -9.9 5.8 81.5 9 11 A G S S- 0 0 74 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.933 77.7 -71.0 162.6 174.4 -7.3 8.6 80.9 10 12 A R - 0 0 166 -2,-0.3 4,-0.1 1,-0.1 3,-0.1 -0.842 54.8-117.7 -97.2 118.9 -3.7 9.4 79.9 11 13 A P > - 0 0 100 0, 0.0 3,-0.8 0, 0.0 2,-0.5 0.230 42.3 -80.4 -42.4 175.0 -1.2 8.5 82.7 12 14 A K T 3 S+ 0 0 209 1,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.704 114.2 15.3 -86.8 129.8 0.9 11.3 84.3 13 15 A G T 3 S+ 0 0 59 -2,-0.5 2,-0.7 1,-0.2 -1,-0.2 0.769 81.6 158.1 83.4 24.7 4.0 12.5 82.3 14 16 A S < - 0 0 51 -3,-0.8 -1,-0.2 -4,-0.1 2,-0.2 -0.723 23.9-161.0 -86.0 116.3 2.8 10.8 79.0 15 17 A K - 0 0 157 -2,-0.7 2,-0.3 1,-0.1 0, 0.0 -0.634 26.0-102.1 -94.7 153.9 4.6 12.5 76.1 16 18 A N - 0 0 144 -2,-0.2 3,-0.1 1,-0.2 -1,-0.1 -0.583 35.7-178.8 -77.3 131.5 3.3 12.3 72.5 17 19 A K + 0 0 208 -2,-0.3 2,-0.5 1,-0.3 -1,-0.2 0.892 68.9 37.7 -93.4 -71.6 5.3 9.8 70.4 18 20 A G S S- 0 0 69 2,-0.0 2,-0.5 1,-0.0 -1,-0.3 -0.676 83.5-135.0 -83.8 127.2 3.8 9.8 66.9 19 21 A A - 0 0 77 -2,-0.5 -1,-0.0 1,-0.1 0, 0.0 -0.672 4.1-152.8 -82.8 128.2 2.7 13.4 65.8 20 22 A A + 0 0 112 -2,-0.5 -1,-0.1 2,-0.0 2,-0.1 0.252 66.8 107.3 -82.4 17.1 -0.7 13.5 64.1 21 23 A K S S- 0 0 173 1,-0.1 2,-0.3 0, 0.0 -2,-0.0 -0.377 81.0 -93.8 -88.1 171.1 0.5 16.6 62.3 22 24 A T - 0 0 135 -2,-0.1 2,-0.1 1,-0.1 -1,-0.1 -0.641 37.3-127.5 -88.2 145.0 1.4 16.7 58.5 23 25 A R - 0 0 219 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 -0.436 6.0-139.7 -86.3 163.6 5.0 16.1 57.4 24 26 A K 0 0 211 -2,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.938 360.0 360.0 -87.1 -70.3 6.9 18.5 55.2 25 27 A T 0 0 173 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.676 360.0 360.0-103.9 360.0 9.0 16.2 52.8