==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 23-MAY-00 1F22 . COMPND 2 MOLECULE: CYTOCHROME C7; . SOURCE 2 ORGANISM_SCIENTIFIC: DESULFUROMONAS ACETOXIDANS; . AUTHOR M.ASSFALG,L.BANCI,I.BERTINI,M.BRUSCHI,M.T.GIUDICI-ORTICONI . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5891.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 10.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 17.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 94 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -95.5 9.9 4.8 -7.2 2 2 A D - 0 0 83 1,-0.5 16,-2.3 15,-0.1 15,-2.1 0.528 360.0 -0.3-128.2 -45.6 8.2 2.1 -9.4 3 3 A V E +A 16 0A 87 13,-0.2 -1,-0.5 14,-0.2 2,-0.3 -0.981 69.3 168.8-139.0 144.4 8.2 -0.8 -7.0 4 4 A V E -A 15 0A 63 11,-1.5 11,-2.8 -2,-0.3 2,-0.4 -0.924 20.4-141.8-135.3 163.8 9.6 -1.0 -3.5 5 5 A T E -A 14 0A 62 -2,-0.3 2,-0.9 9,-0.3 9,-0.3 -1.000 8.3-144.0-124.3 137.9 9.3 -3.5 -0.7 6 6 A Y E -A 13 0A 74 7,-2.5 7,-2.8 -2,-0.4 2,-0.3 -0.873 28.5-146.7 -83.7 102.5 8.9 -2.9 3.0 7 7 A E + 0 0 167 -2,-0.9 2,-0.3 5,-0.3 3,-0.1 -0.574 29.3 163.4 -69.5 135.2 11.0 -5.8 4.3 8 8 A N - 0 0 53 -2,-0.3 4,-0.4 1,-0.1 3,-0.3 -0.979 51.9-113.1-153.9 153.3 9.6 -7.2 7.6 9 9 A K S S+ 0 0 209 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.841 115.2 59.3 -58.1 -40.1 10.0 -10.3 9.7 10 10 A K S S- 0 0 81 1,-0.2 -1,-0.3 -3,-0.1 2,-0.1 0.946 132.5 -52.9 -39.4 -65.7 6.4 -11.2 8.9 11 11 A G - 0 0 2 -3,-0.3 57,-0.2 -5,-0.1 -1,-0.2 -0.383 62.4 -98.4 158.7 91.5 6.7 -11.3 5.2 12 12 A N - 0 0 69 -4,-0.4 55,-1.4 55,-0.2 2,-0.8 0.010 35.5-137.1 -38.3 121.9 8.2 -8.5 3.0 13 13 A V E -AB 6 66A 18 -7,-2.8 -7,-2.5 53,-0.2 2,-0.5 -0.821 12.8-159.8 -88.8 108.6 5.4 -6.4 1.5 14 14 A T E -A 5 0A 73 -2,-0.8 2,-0.5 51,-0.7 -9,-0.3 -0.808 16.4-163.1 -80.4 125.8 6.2 -5.6 -2.1 15 15 A F E -A 4 0A 46 -11,-2.8 -11,-1.5 -2,-0.5 -13,-0.1 -0.977 17.9-125.3-121.1 121.0 4.1 -2.6 -3.0 16 16 A D E +A 3 0A 78 -2,-0.5 -13,-0.2 -13,-0.2 -14,-0.0 -0.288 36.6 160.8 -37.1 131.1 3.2 -1.3 -6.4 17 17 A H S > S+ 0 0 64 -15,-2.1 4,-2.8 3,-0.1 -14,-0.2 0.521 76.5 36.7-120.6 -64.0 4.2 2.3 -6.9 18 18 A K H > S+ 0 0 131 -16,-2.3 4,-2.9 2,-0.2 5,-0.2 0.946 121.6 46.7 -48.7 -64.9 4.3 2.8 -10.7 19 19 A A H > S+ 0 0 29 -17,-0.5 4,-3.1 1,-0.2 5,-0.4 0.936 114.0 46.5 -43.7 -61.2 1.3 0.5 -11.3 20 20 A H H >>S+ 0 0 63 1,-0.2 4,-2.5 2,-0.2 5,-1.0 0.897 112.2 54.1 -56.5 -36.9 -0.8 2.1 -8.5 21 21 A A H X5S+ 0 0 35 -4,-2.8 4,-1.4 3,-0.2 -2,-0.2 0.973 114.3 38.2 -61.0 -52.8 0.2 5.5 -9.9 22 22 A E H <5S+ 0 0 128 -4,-2.9 -2,-0.2 1,-0.2 -1,-0.2 0.909 122.9 41.0 -67.6 -45.3 -1.0 4.7 -13.5 23 23 A K H <5S+ 0 0 151 -4,-3.1 -1,-0.2 -5,-0.2 -2,-0.2 0.905 131.8 23.6 -68.6 -44.6 -4.1 2.8 -12.5 24 24 A L H <5S- 0 0 88 -4,-2.5 -3,-0.2 -5,-0.4 2,-0.2 0.914 100.6-125.6 -94.8 -51.0 -5.2 5.1 -9.7 25 25 A G << - 0 0 42 -4,-1.4 -1,-0.1 -5,-1.0 -2,-0.0 -0.674 42.1 -79.9 144.6 -80.4 -3.5 8.4 -10.5 26 26 A C S >> S+ 0 0 64 -2,-0.2 4,-3.0 -3,-0.1 3,-2.9 -0.085 117.3 82.2 177.1 -50.9 -1.3 9.8 -7.7 27 27 A D T 34 S+ 0 0 113 1,-0.3 -2,-0.1 2,-0.2 5,-0.1 0.753 75.8 81.5 -30.6 -45.7 -4.0 11.3 -5.5 28 28 A A T 34 S- 0 0 43 1,-0.2 -1,-0.3 -8,-0.1 3,-0.1 0.762 121.4 -5.0 -31.4 -47.8 -4.4 7.7 -4.3 29 29 A C T <4 S+ 0 0 84 -3,-2.9 2,-0.4 1,-0.3 -2,-0.2 0.556 135.4 46.9-131.4 -29.1 -1.4 8.3 -1.9 30 30 A H < + 0 0 34 -4,-3.0 -1,-0.3 1,-0.2 -2,-0.1 -0.978 49.0 177.6-128.4 119.2 0.0 11.8 -2.6 31 31 A E S S+ 0 0 194 -2,-0.4 -1,-0.2 2,-0.1 -4,-0.1 0.970 74.8 5.7 -77.7 -65.1 -2.2 14.9 -2.9 32 32 A G S S- 0 0 56 1,-0.3 -2,-0.0 -6,-0.1 0, 0.0 0.185 122.4 -12.4 -96.4-145.5 0.5 17.5 -3.4 33 33 A T - 0 0 139 1,-0.1 -1,-0.3 2,-0.0 -2,-0.1 -0.393 67.9-144.3 -64.2 123.3 4.2 17.3 -3.9 34 34 A P + 0 0 72 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.265 35.5 153.3 -77.9 177.0 5.6 13.8 -3.1 35 35 A A S S- 0 0 97 1,-0.3 2,-0.2 -2,-0.1 -2,-0.0 0.253 70.0 -51.6-172.4 -33.4 8.9 13.1 -1.4 36 36 A K - 0 0 148 2,-0.0 -1,-0.3 0, 0.0 0, 0.0 -0.812 40.9-159.7 161.5 175.1 8.5 9.8 0.4 37 37 A I - 0 0 71 -2,-0.2 -7,-0.0 -3,-0.1 -8,-0.0 0.289 16.5-146.7-133.9 -62.2 6.0 8.4 2.9 38 38 A A - 0 0 48 1,-0.1 2,-0.8 5,-0.0 5,-0.1 0.888 15.0-154.0 73.0 82.1 7.3 5.5 4.9 39 39 A I - 0 0 26 4,-0.1 2,-0.2 3,-0.1 -1,-0.1 -0.811 15.2-170.6 -85.7 109.7 4.1 3.4 5.4 40 40 A D > - 0 0 75 -2,-0.8 4,-3.1 1,-0.0 5,-0.3 -0.561 44.1 -89.2 -93.3 166.2 4.6 1.3 8.6 41 41 A K H > S+ 0 0 166 1,-0.2 4,-2.8 -2,-0.2 5,-0.2 0.803 126.3 58.4 -41.8 -45.8 2.4 -1.5 9.8 42 42 A K H > S+ 0 0 135 2,-0.2 4,-1.4 1,-0.2 3,-0.2 0.977 116.3 27.9 -45.4 -83.2 0.3 1.2 11.6 43 43 A S H >>>S+ 0 0 43 1,-0.2 5,-2.8 2,-0.2 4,-1.7 0.907 120.0 59.5 -50.0 -49.6 -0.6 3.4 8.7 44 44 A A H 3<5S+ 0 0 16 -4,-3.1 6,-2.8 1,-0.3 -1,-0.2 0.893 115.6 31.5 -44.8 -58.2 -0.5 0.4 6.3 45 45 A H H 3<5S+ 0 0 106 -4,-2.8 -1,-0.3 -5,-0.3 -2,-0.2 0.600 129.2 42.0 -77.5 -17.1 -3.1 -1.6 8.1 46 46 A K H <<5S- 0 0 144 -4,-1.4 -3,-0.2 -3,-0.6 -2,-0.2 0.913 133.3 -19.0 -99.6 -70.2 -5.0 1.6 9.3 47 47 A D T <5S+ 0 0 77 -4,-1.7 -3,-0.2 -5,-0.1 -4,-0.1 0.328 120.9 59.3-135.1 5.8 -5.4 4.4 6.6 48 48 A A S >> S+ 0 0 49 1,-0.2 4,-2.8 2,-0.1 3,-0.7 0.968 132.5 54.2 -63.9 -53.1 -3.0 0.4 2.0 50 50 A K H 34 S+ 0 0 92 -6,-2.8 -1,-0.2 -7,-0.2 -5,-0.1 0.791 95.7 63.8 -56.9 -39.8 -6.0 -0.9 4.0 51 51 A T H >4 S+ 0 0 75 1,-0.2 3,-0.5 -7,-0.2 -1,-0.2 0.903 116.2 31.6 -63.1 -39.3 -8.4 2.0 3.4 52 52 A C H X< S+ 0 0 72 -4,-0.8 2,-2.1 -3,-0.7 3,-0.7 0.958 117.5 58.9 -68.0 -55.0 -8.5 1.3 -0.3 53 53 A H T 3< S+ 0 0 66 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 -0.124 75.9 105.2 -74.0 43.7 -8.0 -2.4 0.4 54 54 A K T < S+ 0 0 156 -2,-2.1 -1,-0.2 -3,-0.5 -2,-0.1 0.942 98.0 9.7 -78.0 -61.2 -11.2 -2.6 2.5 55 55 A S S < S+ 0 0 113 -3,-0.7 2,-0.4 -4,-0.2 -2,-0.1 -0.266 98.6 123.7-120.4 38.8 -13.4 -4.4 -0.0 56 56 A N S S- 0 0 83 2,-0.0 -3,-0.0 -4,-0.0 -4,-0.0 -0.852 71.3 -14.8-103.8 141.6 -10.9 -5.4 -2.7 57 57 A N S S- 0 0 151 -2,-0.4 7,-0.0 2,-0.1 3,-0.0 0.058 107.6 -48.0 60.5-175.8 -10.4 -9.0 -3.8 58 58 A G - 0 0 57 2,-0.0 -2,-0.0 1,-0.0 -3,-0.0 -0.832 68.3-117.7 -81.8 123.2 -11.8 -11.9 -1.8 59 59 A P + 0 0 124 0, 0.0 3,-0.1 0, 0.0 -2,-0.1 -0.344 41.1 167.3 -64.5 146.2 -10.8 -11.3 1.9 60 60 A T - 0 0 112 2,-0.2 2,-2.4 1,-0.0 -2,-0.0 -0.188 56.4-104.7-157.2 39.8 -8.5 -14.0 3.2 61 61 A K S S- 0 0 217 2,-0.1 2,-0.1 3,-0.0 -1,-0.0 -0.436 92.4 -9.2 55.6 -73.9 -7.2 -12.5 6.5 62 62 A C S S+ 0 0 77 -2,-2.4 2,-1.4 -3,-0.1 -2,-0.2 -0.124 93.0 87.4-121.4-151.9 -3.7 -11.7 5.0 63 63 A G + 0 0 42 5,-0.3 -2,-0.1 1,-0.1 -1,-0.1 -0.101 65.4 102.9 84.4 -39.0 -1.8 -12.6 1.8 64 64 A G S S+ 0 0 66 -2,-1.4 -1,-0.1 1,-0.2 3,-0.1 0.693 105.1 0.1 -41.7 -35.6 -3.2 -9.5 -0.1 65 65 A C S S+ 0 0 41 1,-0.2 -51,-0.7 3,-0.1 2,-0.4 0.605 119.2 72.9-133.3 -52.4 0.0 -7.5 0.3 66 66 A H B S-B 13 0A 27 -53,-0.2 2,-1.9 1,-0.1 -1,-0.2 -0.648 71.3-141.9 -70.2 128.6 2.6 -9.6 2.2 67 67 A I 0 0 123 -55,-1.4 -55,-0.2 -2,-0.4 -1,-0.1 -0.369 360.0 360.0 -82.6 56.0 4.0 -12.4 0.1 68 68 A K 0 0 175 -2,-1.9 -5,-0.3 -57,-0.2 -3,-0.1 -0.611 360.0 360.0 172.3 360.0 3.8 -14.3 3.5